Wall clock time and date at job start Tue Mar 9 2021 12:51:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35660 * 116.99678 * 2 1 4 4 C 1.40141 * 120.14700 * 179.97438 * 3 2 1 5 5 C 1.47534 * 120.19357 * 359.96057 * 4 3 2 6 6 O 1.21586 * 119.99809 * 359.97438 * 5 4 3 7 7 N 1.34776 * 119.99888 * 179.97438 * 5 4 3 8 8 C 1.46501 * 120.00067 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.84591 * 23.80003 * 8 7 5 10 10 C 1.53774 * 113.61676 * 154.99938 * 8 7 5 11 11 C 1.53778 * 87.08391 * 89.11518 * 10 8 7 12 12 H 1.09002 * 113.61371 * 270.80397 * 11 10 8 13 13 C 1.50697 * 113.61715 * 139.98088 * 11 10 8 14 14 C 1.37919 * 119.92608 * 119.98032 * 13 11 10 15 15 C 1.39653 * 119.84754 * 180.02562 * 14 13 11 16 16 C 1.43204 * 120.14808 * 180.02562 * 15 14 13 17 17 N 9.93339 * 165.20386 * 254.72336 * 5 1 2 18 18 C 1.39607 * 119.69761 * 359.72866 * 15 14 13 19 19 C 1.37966 * 119.84915 * 0.54766 * 18 15 14 20 20 C 1.38346 * 120.14729 * 359.44787 * 19 18 15 21 21 C 1.53777 * 113.61339 * 252.49609 * 8 7 5 22 22 C 1.39714 * 119.61264 * 180.23090 * 4 3 2 23 23 C 1.37785 * 119.90572 * 359.51329 * 22 4 3 24 24 C 1.50703 * 119.84857 * 180.22842 * 23 22 4 25 25 O 1.42908 * 109.46954 * 65.24006 * 24 23 22 26 26 Si 1.86301 * 109.47309 * 185.23750 * 24 23 22 27 27 C 1.38551 * 120.30648 * 0.47363 * 23 22 4 28 28 C 1.38056 * 120.38213 * 359.77804 * 27 23 22 29 29 H 1.09000 * 109.47136 * 60.00469 * 1 2 3 30 30 H 1.09005 * 109.46741 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47559 * 300.00247 * 1 2 3 32 32 H 0.97003 * 120.00223 * 359.97438 * 7 5 4 33 33 H 1.09001 * 113.61671 * 334.56761 * 10 8 7 34 34 H 1.09001 * 113.61759 * 203.67002 * 10 8 7 35 35 H 1.08003 * 120.07801 * 0.04505 * 14 13 11 36 36 H 1.08004 * 120.07985 * 180.27299 * 18 15 14 37 37 H 1.08002 * 119.93050 * 179.73249 * 19 18 15 38 38 H 1.08002 * 119.84561 * 180.25896 * 20 19 18 39 39 H 1.09006 * 113.61002 * 156.33086 * 21 8 7 40 40 H 1.08999 * 113.61435 * 25.43626 * 21 8 7 41 41 H 1.07995 * 120.04342 * 179.73297 * 22 4 3 42 42 H 1.08999 * 109.47609 * 305.24591 * 24 23 22 43 43 H 0.96700 * 113.99953 * 59.99506 * 25 24 23 44 44 H 1.48503 * 109.99924 * 180.02562 * 26 24 23 45 45 H 1.48500 * 110.00081 * 301.32299 * 26 24 23 46 46 H 1.07990 * 119.80784 * 179.75990 * 27 23 22 47 47 H 1.08006 * 119.95321 * 179.97438 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 3.4441 1.2858 0.0005 5 6 4.2550 0.0533 0.0020 6 8 3.7095 -1.0333 0.0032 7 7 5.6005 0.1319 0.0020 8 6 6.4058 -1.0919 0.0040 9 1 5.8707 -1.9512 -0.4000 10 6 7.8112 -0.9055 -0.5916 11 6 8.2769 -0.5332 0.8258 12 1 8.1907 0.5303 1.0485 13 6 9.6265 -1.0989 1.1860 14 6 10.6626 -0.2503 1.5153 15 6 11.9127 -0.7764 1.8483 16 6 12.9929 0.0988 2.1919 17 7 13.8487 0.8419 2.4536 18 6 12.1028 -2.1594 1.8507 19 6 11.0592 -2.9966 1.5136 20 6 9.8234 -2.4687 1.1849 21 6 7.0983 -1.3714 1.3483 22 6 4.0666 2.5365 0.0054 23 6 3.3036 3.6838 -0.0005 24 6 3.9765 5.0322 -0.0004 25 8 4.6995 5.2038 -1.2211 26 14 2.6881 6.3693 0.1513 27 6 1.9204 3.6034 -0.0013 28 6 1.2924 2.3740 -0.0009 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 6.0357 0.9989 0.0007 33 1 7.8782 -0.0828 -1.3034 34 1 8.2520 -1.8288 -0.9677 35 1 10.5075 0.8185 1.5161 36 1 13.0658 -2.5730 2.1115 37 1 11.2060 -4.0665 1.5109 38 1 9.0087 -3.1287 0.9258 39 1 7.3441 -2.4221 1.5026 40 1 6.5896 -0.9248 2.2026 41 1 5.1445 2.6040 0.0102 42 1 4.6656 5.0944 0.8418 43 1 4.1482 5.1600 -2.0143 44 1 3.3389 7.7041 0.1519 45 1 1.7238 6.2754 -0.9741 46 1 1.3301 4.5078 -0.0021 47 1 0.2137 2.3194 -0.0012 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_12496546.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:49 Heat of formation + Delta-G solvation = 14.583733 kcal Electronic energy + Delta-G solvation = -31232.198638 eV Core-core repulsion = 26927.173660 eV Total energy + Delta-G solvation = -4305.024978 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.146 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.94218 -41.36360 -40.13051 -39.27391 -38.81064 -37.28601 -36.76604 -34.62192 -32.84206 -32.35049 -31.98990 -31.64367 -28.64453 -26.83313 -26.59057 -26.26410 -25.30710 -24.73134 -23.11322 -22.65607 -21.56036 -20.76909 -19.50587 -19.10743 -18.48789 -18.17290 -17.47396 -17.27604 -16.96875 -16.87807 -16.53291 -16.28820 -16.07303 -15.96024 -15.91216 -15.62214 -15.17828 -14.93879 -14.92647 -14.63931 -14.60859 -14.29908 -14.18810 -13.94750 -13.64933 -13.61441 -13.48265 -13.44087 -13.22608 -12.95929 -12.88981 -12.64995 -12.48807 -12.28617 -12.13118 -11.93319 -11.79126 -11.73492 -11.33752 -10.94307 -10.57853 -10.26981 -10.05154 -10.01957 -9.80086 -9.33135 -5.05842 -0.31543 -0.29221 0.15107 0.19269 1.18151 1.48654 1.55463 1.81781 1.83981 1.88080 2.06769 2.18399 2.67527 2.74753 2.81194 3.25674 3.33408 3.46133 3.53091 3.54846 3.60502 3.62930 3.72823 3.83963 3.91984 3.95566 3.99171 4.04136 4.12653 4.16429 4.17224 4.29682 4.34056 4.46199 4.53603 4.55913 4.59737 4.60858 4.64782 4.76694 4.81513 4.84839 4.87596 4.94074 5.00641 5.07103 5.19239 5.19363 5.23623 5.40075 5.45430 5.59091 5.69952 6.24671 6.30037 6.50965 6.51511 7.30813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.279 6.279 3 C 0.194 3.806 4 C -0.175 4.175 5 C 0.565 3.435 6 O -0.513 6.513 7 N -0.714 5.714 8 C 0.122 3.878 9 H 0.107 0.893 10 C -0.136 4.136 11 C -0.076 4.076 12 H 0.100 0.900 13 C -0.071 4.071 14 C -0.067 4.067 15 C -0.020 4.020 16 C 0.244 3.756 17 N -0.414 5.414 18 C -0.073 4.073 19 C -0.115 4.115 20 C -0.086 4.086 21 C -0.144 4.144 22 C -0.019 4.019 23 C -0.166 4.166 24 C -0.069 4.069 25 O -0.530 6.530 26 Si 0.683 3.317 27 C -0.048 4.048 28 C -0.214 4.214 29 H 0.058 0.942 30 H 0.105 0.895 31 H 0.059 0.941 32 H 0.399 0.601 33 H 0.078 0.922 34 H 0.100 0.900 35 H 0.132 0.868 36 H 0.133 0.867 37 H 0.135 0.865 38 H 0.133 0.867 39 H 0.097 0.903 40 H 0.077 0.923 41 H 0.135 0.865 42 H 0.119 0.881 43 H 0.377 0.623 44 H -0.256 1.256 45 H -0.260 1.260 46 H 0.134 0.866 47 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.659 -0.761 0.005 5.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.145 3.855 4 C -0.179 4.179 5 C 0.353 3.647 6 O -0.388 6.388 7 N -0.367 5.367 8 C 0.016 3.984 9 H 0.125 0.875 10 C -0.174 4.174 11 C -0.094 4.094 12 H 0.118 0.882 13 C -0.071 4.071 14 C -0.088 4.088 15 C -0.024 4.024 16 C -0.071 4.071 17 N -0.089 5.089 18 C -0.094 4.094 19 C -0.133 4.133 20 C -0.105 4.105 21 C -0.182 4.182 22 C -0.038 4.038 23 C -0.167 4.167 24 C -0.179 4.179 25 O -0.336 6.336 26 Si 0.584 3.416 27 C -0.066 4.066 28 C -0.233 4.233 29 H 0.076 0.924 30 H 0.124 0.876 31 H 0.078 0.922 32 H 0.234 0.766 33 H 0.097 0.903 34 H 0.119 0.881 35 H 0.150 0.850 36 H 0.151 0.849 37 H 0.153 0.847 38 H 0.150 0.850 39 H 0.115 0.885 40 H 0.095 0.905 41 H 0.152 0.848 42 H 0.137 0.863 43 H 0.224 0.776 44 H -0.181 1.181 45 H -0.185 1.185 46 H 0.152 0.848 47 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -4.525 0.145 0.452 4.550 hybrid contribution 0.019 0.079 -1.156 1.159 sum -4.506 0.224 -0.705 4.566 Atomic orbital electron populations 1.23241 0.78147 1.04794 1.01466 1.86382 1.21232 1.25169 1.86136 1.19095 0.90938 0.85079 0.90390 1.19313 0.90883 0.93834 1.13883 1.17929 0.81742 0.88677 0.76396 1.90849 1.71429 1.28579 1.47969 1.45572 1.05745 1.09066 1.76324 1.21812 0.91084 0.88597 0.96871 0.87474 1.23451 0.94684 1.03416 0.95869 1.21639 0.90584 1.00162 0.96997 0.88159 1.19594 0.94851 0.93290 0.99351 1.21080 0.90628 1.00311 0.96741 1.15922 0.89475 0.91010 1.05965 1.26863 0.93343 0.93285 0.93590 1.82438 1.09570 1.07825 1.09109 1.21249 0.99954 0.91142 0.97063 1.21136 0.92512 1.00397 0.99296 1.21319 0.97448 0.94706 0.97028 1.23588 0.95497 1.01042 0.98109 1.20967 0.99820 0.89861 0.93136 1.20054 0.93536 0.95916 1.07206 1.24934 1.04036 0.99005 0.89895 1.86606 1.37416 1.94236 1.15373 0.95026 0.78824 0.77712 0.89991 1.21049 0.93810 0.97495 0.94242 1.21236 1.00763 0.91554 1.09702 0.92364 0.87630 0.92212 0.76554 0.90314 0.88132 0.85027 0.84871 0.84670 0.84961 0.88471 0.90464 0.84752 0.86292 0.77567 1.18080 1.18476 0.84837 0.84138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.28 -0.79 8.57 -40.56 -0.35 -1.14 16 3 C 0.19 0.31 6.70 -38.70 -0.26 0.05 16 4 C -0.18 -0.23 5.89 -104.84 -0.62 -0.85 16 5 C 0.56 1.46 7.76 -12.47 -0.10 1.37 16 6 O -0.51 -3.30 14.76 -16.59 -0.24 -3.54 16 7 N -0.71 0.56 5.21 -54.06 -0.28 0.27 16 8 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 9 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 10 C -0.14 0.43 7.29 -25.92 -0.19 0.25 16 11 C -0.08 0.24 3.85 -90.96 -0.35 -0.11 16 12 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 13 C -0.07 0.17 5.28 -104.69 -0.55 -0.38 16 14 C -0.07 0.10 9.41 -39.17 -0.37 -0.27 16 15 C -0.02 0.01 5.73 -106.93 -0.61 -0.60 16 16 C 0.24 0.55 15.42 -21.56 -0.33 0.22 16 17 N -0.41 -2.18 18.72 43.07 0.81 -1.37 16 18 C -0.07 0.13 9.76 -39.17 -0.38 -0.25 16 19 C -0.12 0.32 10.03 -39.64 -0.40 -0.08 16 20 C -0.09 0.25 8.60 -39.49 -0.34 -0.09 16 21 C -0.14 0.34 7.25 -25.92 -0.19 0.15 16 22 C -0.02 0.02 9.16 -39.20 -0.36 -0.34 16 23 C -0.17 0.24 5.35 -104.67 -0.56 -0.31 16 24 C -0.07 0.14 2.79 36.01 0.10 0.24 16 25 O -0.53 0.28 12.83 -35.23 -0.45 -0.18 16 26 Si 0.68 -1.56 29.87 -169.99 -5.08 -6.63 16 27 C -0.05 0.08 8.65 -39.53 -0.34 -0.26 16 28 C -0.21 0.19 9.03 -39.48 -0.36 -0.17 16 29 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 30 H 0.11 -0.24 8.14 -51.93 -0.42 -0.67 16 31 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 32 H 0.40 -1.23 6.73 -40.82 -0.27 -1.51 16 33 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 34 H 0.10 -0.37 7.72 -51.93 -0.40 -0.77 16 35 H 0.13 -0.34 8.05 -52.48 -0.42 -0.76 16 36 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 37 H 0.14 -0.62 8.06 -52.49 -0.42 -1.04 16 38 H 0.13 -0.58 6.64 -52.49 -0.35 -0.93 16 39 H 0.10 -0.30 6.30 -51.93 -0.33 -0.62 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.13 -0.39 6.40 -52.49 -0.34 -0.73 16 42 H 0.12 -0.34 7.96 -51.93 -0.41 -0.75 16 43 H 0.38 -1.15 8.70 45.56 0.40 -0.75 16 44 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 45 H -0.26 0.12 7.00 56.52 0.40 0.52 16 46 H 0.13 -0.48 4.81 -52.49 -0.25 -0.73 16 47 H 0.14 -0.42 6.30 -52.48 -0.33 -0.75 16 LS Contribution 397.21 15.07 5.99 5.99 Total: 0.00 -10.52 397.21 -10.74 -21.27 By element: Atomic # 1 Polarization: -8.09 SS G_CDS: -5.63 Total: -13.72 kcal Atomic # 6 Polarization: 4.56 SS G_CDS: -5.50 Total: -0.94 kcal Atomic # 7 Polarization: -1.62 SS G_CDS: 0.52 Total: -1.10 kcal Atomic # 8 Polarization: -3.81 SS G_CDS: -1.04 Total: -4.86 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.08 Total: -6.63 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -10.52 -10.74 -21.27 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12496546.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.850 kcal (2) G-P(sol) polarization free energy of solvation -10.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.328 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.745 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.266 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.584 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds