Wall clock time and date at job start Tue Mar 9 2021 12:51:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39619 * 120.15062 * 300.94823 * 3 2 1 5 5 C 1.37966 * 119.84754 * 179.97438 * 4 3 2 6 6 C 1.38343 * 120.14708 * 359.74676 * 5 4 3 7 7 C 1.38379 * 120.30915 * 0.51179 * 6 5 4 8 8 C 1.50693 * 119.92645 * 179.76283 * 7 6 5 9 9 H 1.09001 * 112.85448 * 168.52735 * 8 7 6 10 10 C 1.53784 * 113.61638 * 299.72471 * 8 7 6 11 11 C 1.53783 * 87.08322 * 140.06477 * 10 8 7 12 12 H 1.09000 * 113.61564 * 219.93731 * 11 10 8 13 13 N 1.46494 * 113.61459 * 89.11657 * 11 10 8 14 14 C 1.34779 * 120.00086 * 156.53052 * 13 11 10 15 15 O 1.21569 * 119.99598 * 359.97438 * 14 13 11 16 16 C 1.47721 * 119.99987 * 180.02562 * 14 13 11 17 17 C 1.39637 * 120.11640 * 180.27070 * 16 14 13 18 18 C 1.37855 * 119.87683 * 180.27278 * 17 16 14 19 19 C 1.50706 * 119.94140 * 179.72946 * 18 17 16 20 20 O 1.42901 * 109.47017 * 254.72904 * 19 18 17 21 21 Si 1.86298 * 109.47156 * 134.72616 * 19 18 17 22 22 C 1.38636 * 120.12049 * 359.45386 * 18 17 16 23 23 F 1.35098 * 119.87968 * 180.29356 * 22 18 17 24 24 C 1.38677 * 120.23766 * 0.27710 * 22 18 17 25 25 C 1.37818 * 120.11890 * 359.97438 * 24 22 18 26 26 C 1.53789 * 87.17073 * 334.52927 * 11 10 8 27 27 C 1.37928 * 120.15097 * 359.49067 * 7 6 5 28 28 H 1.08007 * 120.07342 * 0.02562 * 4 3 2 29 29 H 1.07993 * 119.92525 * 180.02562 * 5 4 3 30 30 H 1.08004 * 119.84201 * 180.27192 * 6 5 4 31 31 H 1.08998 * 113.61278 * 25.51630 * 10 8 7 32 32 H 1.09001 * 113.61843 * 254.61221 * 10 8 7 33 33 H 0.97001 * 119.99943 * 336.53290 * 13 11 10 34 34 H 1.07998 * 120.05903 * 0.02562 * 17 16 14 35 35 H 1.08994 * 109.46574 * 14.72321 * 19 18 17 36 36 H 0.96706 * 113.99908 * 299.99742 * 20 19 18 37 37 H 1.48496 * 110.00060 * 58.68431 * 21 19 18 38 38 H 1.48500 * 109.99609 * 180.02562 * 21 19 18 39 39 H 1.07998 * 119.93629 * 180.02562 * 24 22 18 40 40 H 1.07994 * 120.05855 * 180.02562 * 25 24 22 41 41 H 1.08998 * 113.61466 * 140.02891 * 26 11 10 42 42 H 1.09003 * 113.61147 * 270.92438 * 26 11 10 43 43 H 1.07997 * 120.07845 * 180.27664 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2696 -0.6199 1.0354 5 6 4.6492 -0.6160 1.0289 6 6 5.3374 -0.0036 -0.0032 7 6 4.6484 0.6179 -1.0299 8 6 5.4068 1.2870 -2.1470 9 1 4.7684 1.5624 -2.9865 10 6 6.3256 2.4253 -1.6726 11 6 7.3559 1.9132 -2.6931 12 1 8.3820 1.9352 -2.3262 13 7 7.2139 2.5134 -4.0219 14 6 8.2679 2.5495 -4.8611 15 8 9.3365 2.0845 -4.5152 16 6 8.1249 3.1552 -6.2009 17 6 9.2137 3.1889 -7.0744 18 6 9.0763 3.7604 -8.3214 19 6 10.2522 3.8031 -9.2630 20 8 10.7736 5.1326 -9.3140 21 14 9.7028 3.2857 -10.9663 22 6 7.8567 4.2909 -8.7130 23 9 7.7259 4.8445 -9.9384 24 6 6.7706 4.2550 -7.8515 25 6 6.8984 3.6907 -6.6006 26 6 6.6850 0.5353 -2.5646 27 6 3.2692 0.6216 -1.0359 28 1 2.7334 -1.1026 1.8392 29 1 5.1931 -1.0960 1.8289 30 1 6.4174 -0.0073 -0.0057 31 1 6.6489 2.3225 -0.6368 32 1 5.9423 3.4198 -1.9008 33 1 6.3613 2.8847 -4.2978 34 1 10.1629 2.7716 -6.7722 35 1 11.0262 3.1225 -8.9085 36 1 10.1377 5.7930 -9.6216 37 1 8.6251 4.1866 -11.4479 38 1 10.8536 3.3230 -11.9042 39 1 5.8227 4.6693 -8.1617 40 1 6.0518 3.6629 -5.9307 41 1 6.5916 0.0051 -3.5124 42 1 7.1063 -0.0832 -1.7722 43 1 2.7327 1.1031 -1.8400 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_12496548.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:52 Heat of formation + Delta-G solvation = 12.424069 kcal Electronic energy + Delta-G solvation = -28869.413833 eV Core-core repulsion = 24569.061040 eV Total energy + Delta-G solvation = -4300.352793 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.121 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -50.51586 -41.92590 -41.05296 -39.96347 -38.95534 -37.78729 -37.33822 -34.88751 -33.05421 -32.43900 -32.38054 -31.59345 -27.14258 -26.94352 -26.63756 -25.29399 -24.62936 -23.63951 -23.01735 -21.73651 -20.91965 -19.35653 -19.22081 -18.87643 -18.01444 -17.89902 -17.51787 -17.23146 -17.12721 -16.71351 -16.30021 -16.20170 -15.85918 -15.66021 -15.60244 -15.16172 -15.14405 -15.07754 -14.72867 -14.63186 -14.20170 -14.14490 -14.10725 -13.77660 -13.73871 -13.68874 -13.46107 -13.11644 -13.00324 -12.98646 -12.71791 -12.39693 -12.02798 -11.91347 -11.45511 -11.29380 -11.16689 -10.87767 -10.30249 -10.22747 -10.10720 -9.92996 -9.86733 -4.97182 -0.61438 -0.34016 -0.11608 0.13497 1.18452 1.51585 1.61377 1.66698 1.85432 1.87698 1.99371 2.46545 2.73261 2.79871 2.85953 3.15370 3.22473 3.37051 3.40627 3.43950 3.45308 3.52917 3.65592 3.74033 3.75370 3.88925 3.92789 3.99228 4.06614 4.21368 4.28066 4.45179 4.47830 4.51550 4.56097 4.63022 4.65697 4.71701 4.74129 4.79449 4.83238 4.87679 4.90918 4.98449 5.13788 5.18010 5.29972 5.42325 5.47467 5.64584 6.25435 6.27361 6.47541 7.02791 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.073 4.073 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.072 4.072 8 C -0.075 4.075 9 H 0.100 0.900 10 C -0.135 4.135 11 C 0.119 3.881 12 H 0.108 0.892 13 N -0.710 5.710 14 C 0.565 3.435 15 O -0.526 6.526 16 C -0.144 4.144 17 C -0.009 4.009 18 C -0.151 4.151 19 C -0.074 4.074 20 O -0.523 6.523 21 Si 0.675 3.325 22 C 0.120 3.880 23 F -0.123 7.123 24 C -0.152 4.152 25 C -0.055 4.055 26 C -0.143 4.143 27 C -0.067 4.067 28 H 0.133 0.867 29 H 0.136 0.864 30 H 0.132 0.868 31 H 0.102 0.898 32 H 0.079 0.921 33 H 0.401 0.599 34 H 0.151 0.849 35 H 0.125 0.875 36 H 0.375 0.625 37 H -0.231 1.231 38 H -0.259 1.259 39 H 0.147 0.853 40 H 0.138 0.862 41 H 0.078 0.922 42 H 0.098 0.902 43 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.001 -0.961 1.214 1.549 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.072 4.072 8 C -0.094 4.094 9 H 0.118 0.882 10 C -0.173 4.173 11 C 0.014 3.986 12 H 0.126 0.874 13 N -0.361 5.361 14 C 0.353 3.647 15 O -0.403 6.403 16 C -0.148 4.148 17 C -0.028 4.028 18 C -0.153 4.153 19 C -0.183 4.183 20 O -0.329 6.329 21 Si 0.574 3.426 22 C 0.100 3.900 23 F -0.101 7.101 24 C -0.171 4.171 25 C -0.074 4.074 26 C -0.182 4.182 27 C -0.088 4.088 28 H 0.151 0.849 29 H 0.153 0.847 30 H 0.150 0.850 31 H 0.120 0.880 32 H 0.097 0.903 33 H 0.236 0.764 34 H 0.169 0.831 35 H 0.143 0.857 36 H 0.223 0.777 37 H -0.154 1.154 38 H -0.184 1.184 39 H 0.165 0.835 40 H 0.156 0.844 41 H 0.096 0.904 42 H 0.116 0.884 43 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -0.549 -1.336 0.799 1.651 hybrid contribution -0.288 1.451 -0.009 1.479 sum -0.838 0.115 0.790 1.157 Atomic orbital electron populations 1.81313 1.12071 1.07994 1.07296 1.25745 0.92703 0.94047 0.94091 1.15989 0.84297 1.04233 0.98312 1.21249 0.94535 0.96826 0.96790 1.21136 0.93575 0.99610 0.98971 1.21310 1.00680 0.95522 0.93021 1.19577 0.92716 0.98618 0.96322 1.21685 0.95141 0.96490 0.96043 0.88156 1.23444 0.95472 0.98529 0.99884 1.21879 1.00928 0.93543 0.82272 0.87379 1.45565 1.13671 1.61442 1.15462 1.18093 0.83842 0.78629 0.84176 1.90827 1.26772 1.46348 1.76325 1.19975 0.95099 1.04387 0.95301 1.21047 0.98825 0.93035 0.89850 1.20277 0.94659 1.02824 0.97491 1.24993 0.97065 0.88198 1.08034 1.86662 1.41658 1.16179 1.88435 0.95456 0.82047 0.90164 0.74941 1.17918 0.94445 0.96482 0.81153 1.91580 1.96194 1.82942 1.39379 1.21102 0.98872 1.03012 0.94122 1.21170 0.96469 0.94374 0.95360 1.23635 0.94876 0.96711 1.02967 1.21073 0.93650 0.97122 0.96924 0.84903 0.84660 0.84974 0.88001 0.90261 0.76353 0.83137 0.85722 0.77692 1.15448 1.18431 0.83540 0.84431 0.90366 0.88357 0.85041 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.83 18.54 41.84 0.78 -1.06 16 2 C 0.25 0.38 15.33 -22.47 -0.34 0.03 16 3 C -0.02 0.03 5.73 -106.93 -0.61 -0.58 16 4 C -0.07 0.17 9.76 -39.17 -0.38 -0.21 16 5 C -0.11 0.40 10.03 -39.64 -0.40 0.00 16 6 C -0.09 0.32 8.62 -39.49 -0.34 -0.02 16 7 C -0.07 0.25 5.28 -104.69 -0.55 -0.30 16 8 C -0.08 0.35 3.86 -90.82 -0.35 0.00 16 9 H 0.10 -0.56 8.09 -51.93 -0.42 -0.98 16 10 C -0.14 0.64 7.29 -25.92 -0.19 0.45 16 11 C 0.12 -0.37 4.30 -67.12 -0.29 -0.66 16 12 H 0.11 -0.15 7.50 -51.93 -0.39 -0.54 16 13 N -0.71 2.15 5.21 -54.00 -0.28 1.86 16 14 C 0.57 0.03 7.77 -12.38 -0.10 -0.07 16 15 O -0.53 -2.06 15.96 5.30 0.08 -1.97 16 16 C -0.14 0.16 5.87 -104.97 -0.62 -0.46 16 17 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 18 C -0.15 0.08 4.78 -104.61 -0.50 -0.42 16 19 C -0.07 0.02 2.81 36.01 0.10 0.12 16 20 O -0.52 -0.79 12.88 -35.23 -0.45 -1.24 16 21 Si 0.67 -0.38 30.81 -169.99 -5.24 -5.62 16 22 C 0.12 -0.10 6.63 -39.27 -0.26 -0.36 16 23 F -0.12 -0.04 12.57 2.25 0.03 -0.01 16 24 C -0.15 0.39 10.01 -39.57 -0.40 0.00 16 25 C -0.05 0.18 9.54 -39.20 -0.37 -0.19 16 26 C -0.14 0.54 7.27 -25.77 -0.19 0.36 16 27 C -0.07 0.17 9.41 -39.17 -0.37 -0.20 16 28 H 0.13 -0.45 8.06 -52.48 -0.42 -0.88 16 29 H 0.14 -0.70 8.06 -52.49 -0.42 -1.12 16 30 H 0.13 -0.70 6.64 -52.48 -0.35 -1.05 16 31 H 0.10 -0.50 7.73 -51.93 -0.40 -0.90 16 32 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 33 H 0.40 -2.28 6.73 -40.82 -0.27 -2.55 16 34 H 0.15 -0.03 7.58 -52.49 -0.40 -0.43 16 35 H 0.12 -0.16 7.76 -51.93 -0.40 -0.57 16 36 H 0.38 -0.37 8.41 45.56 0.38 0.01 16 37 H -0.23 -0.30 5.27 56.52 0.30 0.00 16 38 H -0.26 -0.72 7.11 56.52 0.40 -0.31 16 39 H 0.15 -0.64 8.06 -52.49 -0.42 -1.06 16 40 H 0.14 -0.90 6.40 -52.49 -0.34 -1.23 16 41 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.10 -0.42 6.31 -51.93 -0.33 -0.75 16 43 H 0.13 -0.49 8.05 -52.49 -0.42 -0.91 16 LS Contribution 373.50 15.07 5.63 5.63 Total: 0.00 -9.27 373.50 -10.73 -20.00 By element: Atomic # 1 Polarization: -9.97 SS G_CDS: -4.75 Total: -14.72 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: -6.52 Total: -2.86 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: 0.49 Total: 0.81 kcal Atomic # 8 Polarization: -2.85 SS G_CDS: -0.37 Total: -3.22 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.03 Total: -0.01 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.24 Total: -5.62 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -9.27 -10.73 -20.00 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12496548.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.420 kcal (2) G-P(sol) polarization free energy of solvation -9.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.150 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.996 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.424 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds