Wall clock time and date at job start Tue Mar 9 2021 12:52:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39611 * 120.15067 * 84.71501 * 3 2 1 5 5 C 1.37963 * 119.84941 * 179.97438 * 4 3 2 6 6 C 1.38343 * 120.15128 * 359.74425 * 5 4 3 7 7 C 1.38386 * 120.30250 * 0.51175 * 6 5 4 8 8 C 1.50705 * 119.92634 * 179.76341 * 7 6 5 9 9 H 1.09002 * 112.90790 * 168.47232 * 8 7 6 10 10 C 1.53782 * 113.61189 * 299.72401 * 8 7 6 11 11 C 1.53788 * 87.07638 * 139.98081 * 10 8 7 12 12 H 1.09005 * 113.60760 * 219.93106 * 11 10 8 13 13 N 1.46490 * 113.61628 * 89.11815 * 11 10 8 14 14 C 1.34779 * 120.00429 * 154.99752 * 13 11 10 15 15 O 1.21627 * 119.99319 * 359.97438 * 14 13 11 16 16 C 1.47284 * 120.00414 * 179.97438 * 14 13 11 17 17 C 1.40368 * 120.04862 * 179.97438 * 16 14 13 18 18 O 1.35679 * 120.13496 * 359.95523 * 17 16 14 19 19 C 1.38317 * 119.72790 * 179.97438 * 17 16 14 20 20 C 1.39565 * 119.81288 * 359.97438 * 19 17 16 21 21 C 1.47570 * 119.95598 * 180.02562 * 20 19 17 22 22 C 1.36105 * 125.94229 * 180.02562 * 21 20 19 23 23 C 1.40800 * 106.73149 * 179.97438 * 22 21 20 24 24 C 1.34828 * 107.04950 * 0.02562 * 23 22 21 25 25 C 1.50705 * 125.65415 * 179.97438 * 24 23 22 26 26 O 1.42897 * 109.46859 * 65.01093 * 25 24 23 27 27 Si 1.86296 * 109.47158 * 185.01393 * 25 24 23 28 28 O 1.34228 * 108.69468 * 359.97438 * 24 23 22 29 29 C 1.39962 * 120.09136 * 0.27655 * 20 19 17 30 30 C 1.36395 * 120.27693 * 359.44638 * 29 20 19 31 31 C 1.53780 * 113.61030 * 37.22137 * 8 7 6 32 32 C 1.37928 * 120.15170 * 359.48845 * 7 6 5 33 33 H 1.08001 * 120.07590 * 359.97438 * 4 3 2 34 34 H 1.08002 * 119.92779 * 179.97438 * 5 4 3 35 35 H 1.07995 * 119.85189 * 180.26997 * 6 5 4 36 36 H 1.08999 * 113.61585 * 25.43555 * 10 8 7 37 37 H 1.08993 * 113.68852 * 254.53831 * 10 8 7 38 38 H 0.97000 * 120.00081 * 334.99477 * 13 11 10 39 39 H 0.96704 * 114.00131 * 270.02010 * 18 17 16 40 40 H 1.08002 * 120.09547 * 179.97438 * 19 17 16 41 41 H 1.08000 * 126.63644 * 359.73546 * 22 21 20 42 42 H 1.08003 * 126.47658 * 179.97438 * 23 22 21 43 43 H 1.08997 * 109.46928 * 305.01679 * 25 24 23 44 44 H 0.96703 * 113.99771 * 179.97438 * 26 25 24 45 45 H 1.48500 * 110.00359 * 299.99882 * 27 25 24 46 46 H 1.48506 * 109.99827 * 61.32103 * 27 25 24 47 47 H 1.07998 * 119.86420 * 179.70669 * 29 20 19 48 48 H 1.07996 * 119.91272 * 180.29758 * 30 29 20 49 49 H 1.08998 * 113.61671 * 105.47227 * 31 8 7 50 50 H 1.09001 * 113.61501 * 334.56879 * 31 8 7 51 51 H 1.08002 * 120.07825 * 180.27929 * 32 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2693 -0.1102 -1.2021 5 6 4.6489 -0.1084 -1.1949 6 6 5.3374 0.0083 -0.0007 7 6 4.6487 0.1132 1.1950 8 6 5.4073 0.2346 2.4915 9 1 4.7699 0.5091 3.3320 10 6 6.3271 -0.9632 2.7814 11 6 7.3575 0.0541 3.2995 12 1 8.3834 -0.1804 3.0153 13 7 7.2174 0.3566 4.7259 14 6 8.2801 0.7954 5.4294 15 8 9.3555 0.9397 4.8798 16 6 8.1391 1.1001 6.8634 17 6 9.2454 1.5566 7.5970 18 8 10.4471 1.7176 6.9881 19 6 9.1054 1.8413 8.9433 20 6 7.8661 1.6735 9.5628 21 6 7.7130 1.9768 10.9989 22 6 6.5668 1.8571 11.7230 23 6 6.8761 2.2492 13.0394 24 6 8.1815 2.5862 13.0551 25 6 8.9497 3.0691 14.2584 26 8 9.0167 2.0246 15.2313 27 14 10.6743 3.5490 13.7426 28 8 8.6836 2.4202 11.8213 29 6 6.7694 1.2128 8.8252 30 6 6.9019 0.9363 7.4961 31 6 6.6826 1.0868 2.3814 32 6 3.2694 0.1128 1.2024 33 1 2.7330 -0.1972 -2.1355 34 1 5.1927 -0.1946 -2.1241 35 1 6.4173 0.0135 -0.0011 36 1 6.6494 -1.4932 1.8851 37 1 5.9462 -1.6310 3.5540 38 1 6.3599 0.2412 5.1643 39 1 11.0078 0.9300 7.0100 40 1 9.9527 2.1925 9.5136 41 1 5.6050 1.5288 11.3575 42 1 6.1960 2.2759 13.8780 43 1 8.4450 3.9342 14.6884 44 1 9.4985 2.2655 16.0344 45 1 11.3731 2.3779 13.1547 46 1 10.6193 4.6563 12.7545 47 1 5.8133 1.0798 9.3093 48 1 6.0506 0.5858 6.9315 49 1 6.5877 2.0750 2.8316 50 1 7.1020 1.1172 1.3758 51 1 2.7331 0.1993 2.1358 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_12807986.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:04 Heat of formation + Delta-G solvation = 30.618307 kcal Electronic energy + Delta-G solvation = -36814.596695 eV Core-core repulsion = 31806.906414 eV Total energy + Delta-G solvation = -5007.690281 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.145 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -43.78870 -41.92809 -41.18508 -40.00229 -38.82025 -38.07135 -37.84438 -37.31079 -34.83314 -34.26165 -33.44250 -32.41494 -32.04242 -31.36349 -30.53619 -27.31540 -26.90191 -26.28966 -25.06440 -24.39330 -24.12770 -23.05198 -22.54599 -22.05704 -21.38190 -20.84518 -19.67477 -19.17573 -18.78085 -18.75942 -18.02093 -17.50151 -17.38981 -17.14487 -16.89807 -16.57022 -16.43463 -16.18465 -16.07556 -15.89450 -15.80437 -15.38517 -15.25405 -15.09423 -14.90317 -14.62628 -14.49203 -14.24326 -14.17372 -14.12172 -14.06788 -13.95452 -13.72827 -13.68785 -13.60285 -13.56878 -13.07064 -12.98042 -12.82999 -12.71343 -12.69261 -12.11542 -11.99839 -11.89704 -11.86693 -11.40485 -11.17620 -10.85040 -10.75377 -10.53058 -10.16892 -10.08715 -10.02246 -9.85214 -9.06124 -5.15605 -0.84651 -0.32267 0.04819 0.15475 0.59272 1.07326 1.33186 1.51251 1.62159 1.68008 1.88985 1.91602 1.95241 1.96870 2.57251 2.75060 2.81546 2.94401 3.16951 3.26293 3.43886 3.48506 3.51382 3.55253 3.59185 3.68557 3.71780 3.78349 3.84886 3.89230 3.91329 3.94942 4.06764 4.08762 4.17632 4.29770 4.31538 4.48056 4.51153 4.54550 4.59175 4.61420 4.67081 4.73096 4.76303 4.78999 4.82369 4.88051 4.92926 4.96244 5.03612 5.11560 5.15605 5.20104 5.33697 5.34422 5.40114 5.49737 5.66470 5.92992 6.36720 6.39496 6.48877 6.63213 7.15154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.072 4.072 8 C -0.075 4.075 9 H 0.100 0.900 10 C -0.135 4.135 11 C 0.120 3.880 12 H 0.108 0.892 13 N -0.712 5.712 14 C 0.563 3.437 15 O -0.514 6.514 16 C -0.166 4.166 17 C 0.180 3.820 18 O -0.474 6.474 19 C -0.142 4.142 20 C 0.032 3.968 21 C 0.021 3.979 22 C -0.174 4.174 23 C -0.168 4.168 24 C -0.002 4.002 25 C -0.036 4.036 26 O -0.543 6.543 27 Si 0.706 3.294 28 O -0.169 6.169 29 C -0.116 4.116 30 C -0.063 4.063 31 C -0.144 4.144 32 C -0.067 4.067 33 H 0.133 0.867 34 H 0.135 0.865 35 H 0.132 0.868 36 H 0.101 0.899 37 H 0.078 0.922 38 H 0.399 0.601 39 H 0.399 0.601 40 H 0.140 0.860 41 H 0.159 0.841 42 H 0.158 0.842 43 H 0.096 0.904 44 H 0.391 0.609 45 H -0.249 1.249 46 H -0.252 1.252 47 H 0.140 0.860 48 H 0.137 0.863 49 H 0.077 0.923 50 H 0.098 0.902 51 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.194 -0.567 4.404 4.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.029 4.029 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.072 4.072 8 C -0.094 4.094 9 H 0.118 0.882 10 C -0.173 4.173 11 C 0.015 3.985 12 H 0.126 0.874 13 N -0.365 5.365 14 C 0.350 3.650 15 O -0.390 6.390 16 C -0.170 4.170 17 C 0.134 3.866 18 O -0.285 6.285 19 C -0.161 4.161 20 C 0.031 3.969 21 C -0.029 4.029 22 C -0.193 4.193 23 C -0.187 4.187 24 C -0.052 4.052 25 C -0.145 4.145 26 O -0.350 6.350 27 Si 0.605 3.395 28 O -0.066 6.066 29 C -0.134 4.134 30 C -0.082 4.082 31 C -0.183 4.183 32 C -0.088 4.088 33 H 0.151 0.849 34 H 0.153 0.847 35 H 0.150 0.850 36 H 0.119 0.881 37 H 0.097 0.903 38 H 0.235 0.765 39 H 0.258 0.742 40 H 0.158 0.842 41 H 0.176 0.824 42 H 0.176 0.824 43 H 0.114 0.886 44 H 0.240 0.760 45 H -0.173 1.173 46 H -0.176 1.176 47 H 0.158 0.842 48 H 0.155 0.845 49 H 0.095 0.905 50 H 0.116 0.884 51 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 1.557 -0.096 2.675 3.097 hybrid contribution -0.780 -0.585 0.273 1.013 sum 0.776 -0.681 2.948 3.124 Atomic orbital electron populations 1.81311 1.12064 1.08398 1.06932 1.25743 0.92701 0.94005 0.94103 1.15985 0.84299 1.07471 0.95099 1.21241 0.94530 0.96901 0.96746 1.21133 0.93574 0.99864 0.98720 1.21313 1.00687 0.96832 0.91705 1.19587 0.92717 0.99880 0.94982 1.21638 0.95146 0.97744 0.94835 0.88178 1.23448 0.95515 0.96081 1.02289 1.21847 1.00847 0.95871 0.79941 0.87404 1.45576 1.12835 1.68348 1.09694 1.17940 0.84106 0.77058 0.85876 1.90852 1.26365 1.50902 1.70871 1.20454 0.95289 1.06760 0.94452 1.18264 0.86178 0.93229 0.88964 1.84774 1.25331 1.40447 1.77990 1.21575 0.98038 1.02584 0.93900 1.17769 0.93868 0.97727 0.87509 1.20350 0.87223 1.04859 0.90460 1.21914 0.98841 1.05238 0.93335 1.21556 0.95290 1.03797 0.98081 1.21463 0.93456 1.06117 0.84129 1.23796 1.10730 0.92704 0.87309 1.86463 1.79825 1.38335 1.30418 0.95262 0.76862 0.81382 0.86022 1.83957 1.38101 1.66105 1.18475 1.20704 0.98266 1.00579 0.93806 1.20812 0.95956 0.97045 0.94379 1.23593 0.94929 0.98841 1.00927 1.21075 0.93650 0.97293 0.96763 0.84902 0.84667 0.84978 0.88065 0.90292 0.76495 0.74196 0.84198 0.82350 0.82439 0.88583 0.75991 1.17274 1.17593 0.84237 0.84530 0.90461 0.88391 0.85047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.00 18.54 41.84 0.78 -1.22 16 2 C 0.25 0.49 15.33 -22.47 -0.34 0.14 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.14 9.76 -39.17 -0.38 -0.24 16 5 C -0.11 0.34 10.03 -39.64 -0.40 -0.06 16 6 C -0.09 0.27 8.62 -39.49 -0.34 -0.07 16 7 C -0.07 0.20 5.28 -104.68 -0.55 -0.36 16 8 C -0.08 0.28 3.85 -90.96 -0.35 -0.07 16 9 H 0.10 -0.46 8.09 -51.93 -0.42 -0.88 16 10 C -0.14 0.53 7.29 -25.91 -0.19 0.34 16 11 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 12 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 13 N -0.71 1.17 5.21 -54.13 -0.28 0.89 16 14 C 0.56 1.00 7.75 -12.58 -0.10 0.90 16 15 O -0.51 -2.79 14.74 -16.71 -0.25 -3.03 16 16 C -0.17 -0.16 5.89 -104.79 -0.62 -0.78 16 17 C 0.18 0.41 6.71 -38.75 -0.26 0.15 16 18 O -0.47 -1.38 11.56 -40.70 -0.47 -1.85 16 19 C -0.14 -0.30 9.65 -39.06 -0.38 -0.67 16 20 C 0.03 0.05 5.87 -104.95 -0.62 -0.57 16 21 C 0.02 0.05 7.02 -36.54 -0.26 -0.20 16 22 C -0.17 -0.20 10.26 -39.38 -0.40 -0.60 16 23 C -0.17 -0.28 10.78 -39.82 -0.43 -0.71 16 24 C 0.00 0.00 6.24 -35.52 -0.22 -0.23 16 25 C -0.04 0.02 2.97 36.01 0.11 0.13 16 26 O -0.54 0.38 12.86 -35.23 -0.45 -0.07 16 27 Si 0.71 -0.70 32.11 -169.99 -5.46 -6.15 16 28 O -0.17 -0.67 8.79 4.75 0.04 -0.62 16 29 C -0.12 0.12 9.48 -39.60 -0.38 -0.25 16 30 C -0.06 0.11 9.47 -39.61 -0.38 -0.27 16 31 C -0.14 0.38 7.25 -25.92 -0.19 0.19 16 32 C -0.07 0.13 9.41 -39.17 -0.37 -0.24 16 33 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 34 H 0.14 -0.63 8.06 -52.49 -0.42 -1.05 16 35 H 0.13 -0.61 6.63 -52.49 -0.35 -0.95 16 36 H 0.10 -0.43 7.73 -51.93 -0.40 -0.83 16 37 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 38 H 0.40 -1.71 6.71 -40.82 -0.27 -1.99 16 39 H 0.40 -0.37 9.06 45.56 0.41 0.05 16 40 H 0.14 0.30 7.90 -52.49 -0.41 -0.11 16 41 H 0.16 -0.28 7.24 -52.49 -0.38 -0.66 16 42 H 0.16 -0.03 8.06 -52.48 -0.42 -0.45 16 43 H 0.10 -0.30 7.96 -51.93 -0.41 -0.71 16 44 H 0.39 -2.42 8.74 45.56 0.40 -2.02 16 45 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 46 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 47 H 0.14 -0.48 6.95 -52.49 -0.37 -0.85 16 48 H 0.14 -0.70 6.38 -52.49 -0.33 -1.03 16 49 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 50 H 0.10 -0.32 6.29 -51.93 -0.33 -0.64 16 51 H 0.13 -0.40 8.05 -52.49 -0.42 -0.83 16 LS Contribution 442.63 15.07 6.67 6.67 Total: 0.00 -13.57 442.63 -12.35 -25.92 By element: Atomic # 1 Polarization: -10.93 SS G_CDS: -4.99 Total: -15.91 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: -7.94 Total: -4.61 kcal Atomic # 7 Polarization: -0.83 SS G_CDS: 0.49 Total: -0.33 kcal Atomic # 8 Polarization: -4.45 SS G_CDS: -1.13 Total: -5.58 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.46 Total: -6.15 kcal Total LS contribution 6.67 Total: 6.67 kcal Total: -13.57 -12.35 -25.92 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12807986.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.536 kcal (2) G-P(sol) polarization free energy of solvation -13.569 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.917 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.618 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds