Wall clock time and date at job start Tue Mar 9 2021 12:52:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39611 * 120.15067 * 84.71501 * 3 2 1 5 5 C 1.37963 * 119.84941 * 179.97438 * 4 3 2 6 6 C 1.38343 * 120.15128 * 359.74425 * 5 4 3 7 7 C 1.38386 * 120.30250 * 0.51175 * 6 5 4 8 8 C 1.50705 * 119.92634 * 179.76341 * 7 6 5 9 9 H 1.09002 * 112.90790 * 168.47232 * 8 7 6 10 10 C 1.53782 * 113.61189 * 299.72401 * 8 7 6 11 11 C 1.53788 * 87.07638 * 139.98081 * 10 8 7 12 12 H 1.09005 * 113.60760 * 219.93106 * 11 10 8 13 13 N 1.46490 * 113.61628 * 89.11815 * 11 10 8 14 14 C 1.34779 * 120.00429 * 154.99752 * 13 11 10 15 15 O 1.21627 * 119.99319 * 359.97438 * 14 13 11 16 16 C 1.47284 * 120.00414 * 179.97438 * 14 13 11 17 17 C 1.40368 * 120.04862 * 179.97438 * 16 14 13 18 18 O 1.35679 * 120.13496 * 359.95523 * 17 16 14 19 19 C 1.38317 * 119.72790 * 179.97438 * 17 16 14 20 20 C 1.39565 * 119.81288 * 359.97438 * 19 17 16 21 21 C 1.47570 * 119.95598 * 180.02562 * 20 19 17 22 22 C 1.36105 * 125.94229 * 180.02562 * 21 20 19 23 23 C 1.40800 * 106.73149 * 179.97438 * 22 21 20 24 24 C 1.34828 * 107.04950 * 0.02562 * 23 22 21 25 25 C 1.50705 * 125.65415 * 179.97438 * 24 23 22 26 26 O 1.42897 * 109.46859 * 65.01093 * 25 24 23 27 27 Si 1.86296 * 109.47158 * 185.01393 * 25 24 23 28 28 O 1.34228 * 108.69468 * 359.97438 * 24 23 22 29 29 C 1.39962 * 120.09136 * 0.27655 * 20 19 17 30 30 C 1.36395 * 120.27693 * 359.44638 * 29 20 19 31 31 C 1.53780 * 113.61030 * 37.22137 * 8 7 6 32 32 C 1.37928 * 120.15170 * 359.48845 * 7 6 5 33 33 H 1.08001 * 120.07590 * 359.97438 * 4 3 2 34 34 H 1.08002 * 119.92779 * 179.97438 * 5 4 3 35 35 H 1.07995 * 119.85189 * 180.26997 * 6 5 4 36 36 H 1.08999 * 113.61585 * 25.43555 * 10 8 7 37 37 H 1.08993 * 113.68852 * 254.53831 * 10 8 7 38 38 H 0.97000 * 120.00081 * 334.99477 * 13 11 10 39 39 H 0.96704 * 114.00131 * 270.02010 * 18 17 16 40 40 H 1.08002 * 120.09547 * 179.97438 * 19 17 16 41 41 H 1.08000 * 126.63644 * 359.73546 * 22 21 20 42 42 H 1.08003 * 126.47658 * 179.97438 * 23 22 21 43 43 H 1.08997 * 109.46928 * 305.01679 * 25 24 23 44 44 H 0.96703 * 113.99771 * 179.97438 * 26 25 24 45 45 H 1.48500 * 110.00359 * 299.99882 * 27 25 24 46 46 H 1.48506 * 109.99827 * 61.32103 * 27 25 24 47 47 H 1.07998 * 119.86420 * 179.70669 * 29 20 19 48 48 H 1.07996 * 119.91272 * 180.29758 * 30 29 20 49 49 H 1.08998 * 113.61671 * 105.47227 * 31 8 7 50 50 H 1.09001 * 113.61501 * 334.56879 * 31 8 7 51 51 H 1.08002 * 120.07825 * 180.27929 * 32 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2693 -0.1102 -1.2021 5 6 4.6489 -0.1084 -1.1949 6 6 5.3374 0.0083 -0.0007 7 6 4.6487 0.1132 1.1950 8 6 5.4073 0.2346 2.4915 9 1 4.7699 0.5091 3.3320 10 6 6.3271 -0.9632 2.7814 11 6 7.3575 0.0541 3.2995 12 1 8.3834 -0.1804 3.0153 13 7 7.2174 0.3566 4.7259 14 6 8.2801 0.7954 5.4294 15 8 9.3555 0.9397 4.8798 16 6 8.1391 1.1001 6.8634 17 6 9.2454 1.5566 7.5970 18 8 10.4471 1.7176 6.9881 19 6 9.1054 1.8413 8.9433 20 6 7.8661 1.6735 9.5628 21 6 7.7130 1.9768 10.9989 22 6 6.5668 1.8571 11.7230 23 6 6.8761 2.2492 13.0394 24 6 8.1815 2.5862 13.0551 25 6 8.9497 3.0691 14.2584 26 8 9.0167 2.0246 15.2313 27 14 10.6743 3.5490 13.7426 28 8 8.6836 2.4202 11.8213 29 6 6.7694 1.2128 8.8252 30 6 6.9019 0.9363 7.4961 31 6 6.6826 1.0868 2.3814 32 6 3.2694 0.1128 1.2024 33 1 2.7330 -0.1972 -2.1355 34 1 5.1927 -0.1946 -2.1241 35 1 6.4173 0.0135 -0.0011 36 1 6.6494 -1.4932 1.8851 37 1 5.9462 -1.6310 3.5540 38 1 6.3599 0.2412 5.1643 39 1 11.0078 0.9300 7.0100 40 1 9.9527 2.1925 9.5136 41 1 5.6050 1.5288 11.3575 42 1 6.1960 2.2759 13.8780 43 1 8.4450 3.9342 14.6884 44 1 9.4985 2.2655 16.0344 45 1 11.3731 2.3779 13.1547 46 1 10.6193 4.6563 12.7545 47 1 5.8133 1.0798 9.3093 48 1 6.0506 0.5858 6.9315 49 1 6.5877 2.0750 2.8316 50 1 7.1020 1.1172 1.3758 51 1 2.7331 0.1993 2.1358 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_12807986.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:03 Heat of formation + Delta-G solvation = 29.681067 kcal Electronic energy + Delta-G solvation = -36814.637337 eV Core-core repulsion = 31806.906414 eV Total energy + Delta-G solvation = -5007.730922 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.145 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.87942 -41.87300 -41.09100 -39.95064 -38.82241 -38.08426 -37.82815 -37.44173 -34.86613 -34.33484 -33.41728 -32.23347 -31.92147 -31.38142 -30.53174 -27.28994 -26.64429 -26.12893 -24.95866 -24.37390 -24.13796 -22.88742 -22.56268 -22.09048 -21.43892 -20.75217 -19.72502 -19.03817 -18.75902 -18.69646 -18.08800 -17.34911 -17.29753 -17.23751 -16.76476 -16.58962 -16.40840 -16.14480 -16.06618 -15.88012 -15.74367 -15.43158 -15.18262 -15.09762 -14.77824 -14.55752 -14.43989 -14.28586 -14.20320 -14.16752 -14.01418 -13.99739 -13.78176 -13.64847 -13.61298 -13.39455 -12.95951 -12.85014 -12.76957 -12.71869 -12.48246 -12.27418 -11.99771 -11.74371 -11.66075 -11.24963 -11.19450 -10.98151 -10.79513 -10.46205 -10.11847 -10.04429 -9.90428 -9.65498 -9.11605 -5.15367 -0.89325 -0.18678 0.04078 0.38186 0.52309 1.11483 1.30403 1.49339 1.56544 1.58449 1.84637 1.91159 1.95445 1.99932 2.55398 2.82896 2.86289 2.91592 3.19593 3.47689 3.51396 3.58212 3.69344 3.71279 3.72611 3.78048 3.88939 3.90551 3.94569 4.02650 4.10989 4.19470 4.20724 4.26691 4.33382 4.34755 4.51469 4.54017 4.59386 4.66927 4.71924 4.78971 4.79719 4.84845 4.90114 4.97078 5.01252 5.02081 5.06970 5.09929 5.11490 5.20941 5.34303 5.35468 5.42649 5.44536 5.53075 5.69249 5.85261 5.90214 6.39965 6.45674 6.60121 6.80777 7.14971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.277 3.723 3 C -0.046 4.046 4 C -0.077 4.077 5 C -0.117 4.117 6 C -0.084 4.084 7 C -0.074 4.074 8 C -0.066 4.066 9 H 0.115 0.885 10 C -0.123 4.123 11 C 0.111 3.889 12 H 0.087 0.913 13 N -0.694 5.694 14 C 0.560 3.440 15 O -0.561 6.561 16 C -0.176 4.176 17 C 0.162 3.838 18 O -0.495 6.495 19 C -0.162 4.162 20 C 0.022 3.978 21 C -0.005 4.005 22 C -0.167 4.167 23 C -0.175 4.175 24 C -0.031 4.031 25 C -0.035 4.035 26 O -0.559 6.559 27 Si 0.799 3.201 28 O -0.197 6.197 29 C -0.107 4.107 30 C -0.047 4.047 31 C -0.144 4.144 32 C -0.066 4.066 33 H 0.139 0.861 34 H 0.154 0.846 35 H 0.148 0.852 36 H 0.107 0.893 37 H 0.089 0.911 38 H 0.415 0.585 39 H 0.409 0.591 40 H 0.122 0.878 41 H 0.191 0.809 42 H 0.177 0.823 43 H 0.129 0.871 44 H 0.414 0.586 45 H -0.310 1.310 46 H -0.298 1.298 47 H 0.173 0.827 48 H 0.179 0.821 49 H 0.064 0.936 50 H 0.103 0.897 51 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.275 -1.236 5.059 5.215 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.038 4.038 3 C -0.050 4.050 4 C -0.097 4.097 5 C -0.135 4.135 6 C -0.102 4.102 7 C -0.074 4.074 8 C -0.084 4.084 9 H 0.133 0.867 10 C -0.161 4.161 11 C 0.006 3.994 12 H 0.105 0.895 13 N -0.347 5.347 14 C 0.348 3.652 15 O -0.440 6.440 16 C -0.179 4.179 17 C 0.115 3.885 18 O -0.308 6.308 19 C -0.180 4.180 20 C 0.021 3.979 21 C -0.054 4.054 22 C -0.185 4.185 23 C -0.194 4.194 24 C -0.080 4.080 25 C -0.144 4.144 26 O -0.371 6.371 27 Si 0.706 3.294 28 O -0.096 6.096 29 C -0.125 4.125 30 C -0.065 4.065 31 C -0.182 4.182 32 C -0.087 4.087 33 H 0.157 0.843 34 H 0.171 0.829 35 H 0.166 0.834 36 H 0.126 0.874 37 H 0.108 0.892 38 H 0.254 0.746 39 H 0.269 0.731 40 H 0.140 0.860 41 H 0.208 0.792 42 H 0.194 0.806 43 H 0.146 0.854 44 H 0.267 0.733 45 H -0.238 1.238 46 H -0.226 1.226 47 H 0.191 0.809 48 H 0.196 0.804 49 H 0.083 0.917 50 H 0.122 0.878 51 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.401 -0.771 3.377 3.487 hybrid contribution -0.061 -0.401 0.016 0.406 sum -0.462 -1.171 3.394 3.620 Atomic orbital electron populations 1.81321 1.13792 1.10964 1.08901 1.26160 0.93084 0.92193 0.92329 1.16102 0.82873 1.09723 0.96268 1.21405 0.95157 0.96520 0.96628 1.21372 0.93140 0.99327 0.99687 1.21597 1.01623 0.95467 0.91550 1.19681 0.92381 0.99786 0.95548 1.21622 0.94652 0.97233 0.94882 0.86742 1.23405 0.94220 0.95771 1.02664 1.21926 1.00445 0.97354 0.79694 0.89519 1.45440 1.12638 1.66762 1.09823 1.18111 0.84138 0.76737 0.86214 1.90827 1.28258 1.53200 1.71752 1.20535 0.95984 1.07236 0.94180 1.18454 0.86442 0.94373 0.89195 1.84726 1.26211 1.41614 1.78258 1.21494 0.98411 1.04095 0.94026 1.18012 0.94314 0.98073 0.87459 1.20767 0.87713 1.05895 0.91012 1.22324 0.99426 1.03938 0.92858 1.21909 0.95177 1.03326 0.98939 1.22217 0.94671 1.06698 0.84456 1.23895 1.10148 0.93529 0.86877 1.86411 1.80433 1.38727 1.31490 0.94465 0.74941 0.76155 0.83827 1.83952 1.39390 1.66829 1.19462 1.21084 0.98579 0.98998 0.93838 1.21234 0.95848 0.95084 0.94319 1.23598 0.95603 0.98109 1.00923 1.21216 0.94067 0.96693 0.96713 0.84306 0.82856 0.83397 0.87439 0.89204 0.74645 0.73114 0.85961 0.79216 0.80574 0.85364 0.73292 1.23789 1.22576 0.80933 0.80352 0.91690 0.87826 0.84005 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.14 18.54 19.00 0.35 -4.78 16 2 C 0.28 1.21 15.33 88.33 1.35 2.56 16 3 C -0.05 0.09 5.73 -21.36 -0.12 -0.03 16 4 C -0.08 0.35 9.76 22.54 0.22 0.57 16 5 C -0.12 0.88 10.03 22.23 0.22 1.10 16 6 C -0.08 0.68 8.62 22.33 0.19 0.87 16 7 C -0.07 0.55 5.28 -19.90 -0.11 0.44 16 8 C -0.07 0.64 3.85 -11.01 -0.04 0.59 16 9 H 0.11 -1.40 8.09 -2.39 -0.02 -1.42 16 10 C -0.12 1.21 7.29 31.12 0.23 1.44 16 11 C 0.11 -0.53 4.32 45.52 0.20 -0.33 16 12 H 0.09 0.01 7.46 -2.38 -0.02 -0.01 16 13 N -0.69 2.99 5.21 -443.43 -2.31 0.68 16 14 C 0.56 2.29 7.75 86.62 0.67 2.96 16 15 O -0.56 -7.22 14.74 16.88 0.25 -6.98 16 16 C -0.18 -0.41 5.89 -19.97 -0.12 -0.53 16 17 C 0.16 1.13 6.71 22.81 0.15 1.28 16 18 O -0.49 -4.60 11.56 -68.97 -0.80 -5.40 16 19 C -0.16 -1.14 9.65 22.61 0.22 -0.92 16 20 C 0.02 0.08 5.87 -20.08 -0.12 -0.04 16 21 C -0.01 -0.03 7.02 24.24 0.17 0.14 16 22 C -0.17 -0.20 10.26 22.40 0.23 0.03 16 23 C -0.17 -0.45 10.78 22.11 0.24 -0.21 16 24 C -0.03 -0.18 6.24 24.90 0.16 -0.02 16 25 C -0.03 0.05 2.97 71.24 0.21 0.26 16 26 O -0.56 1.20 12.86 -148.98 -1.92 -0.71 16 27 Si 0.80 -0.23 32.11 68.60 2.20 1.97 16 28 O -0.20 -1.98 8.79 -5.92 -0.05 -2.03 16 29 C -0.11 0.41 9.48 22.26 0.21 0.62 16 30 C -0.05 0.25 9.47 22.25 0.21 0.46 16 31 C -0.14 0.91 7.25 31.12 0.23 1.14 16 32 C -0.07 0.35 9.41 22.54 0.21 0.56 16 33 H 0.14 -0.89 8.06 -2.91 -0.02 -0.91 16 34 H 0.15 -1.74 8.06 -2.91 -0.02 -1.76 16 35 H 0.15 -1.69 6.63 -2.91 -0.02 -1.71 16 36 H 0.11 -1.14 7.73 -2.39 -0.02 -1.16 16 37 H 0.09 -1.02 8.14 -2.39 -0.02 -1.04 16 38 H 0.41 -4.65 6.71 -92.71 -0.62 -5.27 16 39 H 0.41 0.82 9.06 -74.05 -0.67 0.15 16 40 H 0.12 1.12 7.90 -2.91 -0.02 1.10 16 41 H 0.19 -1.24 7.24 -2.91 -0.02 -1.26 16 42 H 0.18 -0.37 8.06 -2.91 -0.02 -0.39 16 43 H 0.13 -1.01 7.96 -2.39 -0.02 -1.03 16 44 H 0.41 -5.66 8.74 -74.06 -0.65 -6.31 16 45 H -0.31 -2.97 7.11 99.48 0.71 -2.26 16 46 H -0.30 -2.11 7.11 99.48 0.71 -1.41 16 47 H 0.17 -1.85 6.95 -2.91 -0.02 -1.87 16 48 H 0.18 -2.55 6.38 -2.91 -0.02 -2.57 16 49 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 50 H 0.10 -0.79 6.29 -2.39 -0.02 -0.80 16 51 H 0.14 -1.11 8.05 -2.91 -0.02 -1.13 16 Total: 0.00 -37.28 442.63 1.69 -35.59 By element: Atomic # 1 Polarization: -30.44 SS G_CDS: -0.85 Total: -31.29 kcal Atomic # 6 Polarization: 8.14 SS G_CDS: 4.82 Total: 12.95 kcal Atomic # 7 Polarization: -2.14 SS G_CDS: -1.96 Total: -4.10 kcal Atomic # 8 Polarization: -12.60 SS G_CDS: -2.52 Total: -15.12 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: 2.20 Total: 1.97 kcal Total: -37.28 1.69 -35.59 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12807986.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.268 kcal (2) G-P(sol) polarization free energy of solvation -37.281 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.587 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.681 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds