Wall clock time and date at job start Tue Mar 9 2021 12:52:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.39279 * 121.03306 * 2 1 4 4 C 1.46495 * 134.20425 * 359.94620 * 3 2 1 5 5 C 1.50698 * 126.59761 * 0.02562 * 4 3 2 6 6 O 1.42901 * 109.47181 * 284.99192 * 5 4 3 7 7 Si 1.86304 * 109.46991 * 164.99545 * 5 4 3 8 8 C 1.34181 * 106.80415 * 180.26827 * 4 3 2 9 9 N 1.36950 * 109.95117 * 359.60617 * 8 4 3 10 10 C 1.37160 * 110.11144 * 0.41140 * 9 8 4 11 11 N 1.32820 * 132.96007 * 179.72818 * 10 9 8 12 12 C 1.31309 * 121.88878 * 180.02562 * 11 10 9 13 13 C 1.39755 * 121.02935 * 179.97438 * 2 1 3 14 14 C 1.47663 * 120.45176 * 359.97438 * 13 2 1 15 15 O 1.21578 * 120.00261 * 5.99629 * 14 13 2 16 16 N 1.34777 * 120.00057 * 185.99396 * 14 13 2 17 17 C 1.46506 * 119.99963 * 180.02562 * 16 14 13 18 18 H 1.08992 * 112.85129 * 25.33314 * 17 16 14 19 19 C 1.53781 * 113.61086 * 156.52934 * 17 16 14 20 20 C 1.53780 * 87.08264 * 89.11309 * 19 17 16 21 21 H 1.08994 * 113.61876 * 270.88518 * 20 19 17 22 22 C 1.50697 * 113.61369 * 140.05945 * 20 19 17 23 23 C 1.37935 * 119.92270 * 119.72782 * 22 20 19 24 24 C 1.39655 * 119.84313 * 179.77214 * 23 22 20 25 25 C 1.43199 * 120.14452 * 180.25520 * 24 23 22 26 26 N 9.92440 * 159.28227 * 89.98511 * 14 1 2 27 27 C 1.39610 * 119.70051 * 0.50307 * 24 23 22 28 28 C 1.37965 * 119.84647 * 359.74793 * 27 24 23 29 29 C 1.38346 * 120.15156 * 0.02562 * 28 27 24 30 30 C 1.53777 * 113.61006 * 254.13433 * 17 16 14 31 31 H 1.09004 * 109.46828 * 96.28727 * 1 2 3 32 32 H 1.08993 * 109.47252 * 216.28649 * 1 2 3 33 33 H 1.09001 * 109.46607 * 336.29234 * 1 2 3 34 34 H 1.09001 * 109.47535 * 44.99792 * 5 4 3 35 35 H 0.96704 * 113.99895 * 300.00381 * 6 5 4 36 36 H 1.48506 * 109.99755 * 179.97438 * 7 5 4 37 37 H 1.48494 * 110.00120 * 301.31874 * 7 5 4 38 38 H 1.08001 * 125.02479 * 179.76479 * 8 4 3 39 39 H 0.97003 * 124.94561 * 180.17023 * 9 8 4 40 40 H 1.07995 * 119.31381 * 179.97438 * 12 11 10 41 41 H 0.97002 * 119.99694 * 0.02562 * 16 14 13 42 42 H 1.08995 * 113.61425 * 203.66439 * 19 17 16 43 43 H 1.08999 * 113.61823 * 334.56812 * 19 17 16 44 44 H 1.07996 * 120.07543 * 0.02562 * 23 22 20 45 45 H 1.08003 * 120.07563 * 179.72910 * 27 24 23 46 46 H 1.08010 * 119.92237 * 180.02562 * 28 27 24 47 47 H 1.08000 * 119.84116 * 180.02562 * 29 28 27 48 48 H 1.09002 * 113.62156 * 25.43669 * 30 17 16 49 49 H 1.09003 * 113.61327 * 156.33902 * 30 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1934 0.0000 4 6 1.8518 2.6100 -0.0010 5 6 0.4529 3.1705 -0.0018 6 8 -0.1184 3.0234 -1.3034 7 14 0.5073 4.9767 0.4518 8 6 2.9950 3.3125 -0.0064 9 7 4.0671 2.4603 -0.0001 10 6 3.6349 1.1586 0.0005 11 7 4.2721 -0.0068 0.0009 12 6 3.6267 -1.1503 0.0009 13 6 2.2274 -1.1976 0.0005 14 6 1.5224 -2.4950 0.0017 15 8 0.3121 -2.5293 -0.1078 16 7 2.2207 -3.6413 0.1241 17 6 1.5212 -4.9286 0.1247 18 1 0.5653 -4.8911 -0.3976 19 6 2.4081 -6.1117 -0.2980 20 6 2.7866 -6.2562 1.1855 21 1 3.6528 -5.6614 1.4751 22 6 2.8781 -7.6873 1.6485 23 6 4.0687 -8.1747 2.1460 24 6 4.1504 -9.4999 2.5790 25 6 5.3817 -10.0111 3.1018 26 7 6.3583 -10.4161 3.5179 27 6 3.0277 -10.3255 2.4951 28 6 1.8446 -9.8264 1.9905 29 6 1.7694 -8.5113 1.5677 30 6 1.4394 -5.5845 1.5131 31 1 -0.3633 -0.1125 -1.0215 32 1 -0.3633 -0.8283 0.6081 33 1 -0.3632 0.9410 0.4132 34 1 -0.1550 2.6316 0.7249 35 1 0.3718 3.4784 -2.0018 36 1 -0.8661 5.5414 0.4539 37 1 1.1286 5.1457 1.7900 38 1 3.0602 4.3905 -0.0121 39 1 4.9968 2.7370 0.0000 40 1 4.1869 -2.0736 0.0008 41 1 3.1863 -3.6139 0.2118 42 1 1.8470 -6.9598 -0.6901 43 1 3.2441 -5.8247 -0.9359 44 1 4.9345 -7.5319 2.2044 45 1 3.0853 -11.3526 2.8242 46 1 0.9751 -10.4639 1.9255 47 1 0.8406 -8.1257 1.1739 48 1 1.4938 -4.8723 2.3365 49 1 0.6139 -6.2888 1.6153 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_12890568.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:08 Heat of formation + Delta-G solvation = 96.262297 kcal Electronic energy + Delta-G solvation = -34022.335139 eV Core-core repulsion = 29496.692479 eV Total energy + Delta-G solvation = -4525.642660 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.153 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.86811 -41.71387 -40.64254 -39.37152 -38.52594 -37.73928 -37.29458 -35.17335 -34.55820 -32.39403 -32.31566 -31.89544 -30.78036 -28.83452 -26.86331 -26.74659 -26.22523 -25.07799 -24.57391 -23.91983 -22.93952 -22.00773 -20.81220 -20.70517 -19.41998 -19.00346 -18.74986 -17.68956 -17.52302 -17.45226 -17.13896 -16.79214 -16.61329 -16.41136 -16.15521 -15.81751 -15.59765 -15.52040 -15.33714 -15.08962 -14.96507 -14.63904 -14.56156 -14.18427 -14.13731 -14.08875 -13.83467 -13.77992 -13.69681 -13.59030 -13.57136 -13.23531 -13.11244 -12.96393 -12.88112 -12.65651 -12.28952 -12.04988 -11.94389 -11.82998 -11.36822 -11.14369 -11.04076 -10.44962 -10.19943 -10.13155 -10.05966 -9.82708 -9.60945 -9.14922 -5.14542 -0.29727 -0.24915 -0.07442 0.18193 1.22052 1.35828 1.55149 1.63040 1.70186 1.88617 1.91886 1.93368 2.01832 2.77362 2.82681 2.84041 3.23940 3.32405 3.42278 3.49643 3.52822 3.58442 3.60085 3.70157 3.71039 3.75722 3.81764 3.94317 3.98497 4.06897 4.11694 4.20539 4.26388 4.33072 4.37881 4.54068 4.57945 4.61954 4.63122 4.72368 4.78658 4.79630 4.85401 4.91138 4.97110 5.01756 5.04697 5.18236 5.18805 5.22728 5.35382 5.38928 5.48437 5.58720 5.69174 5.75850 6.07994 6.43150 6.51178 6.59836 6.83487 7.21486 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.149 4.149 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.537 6.537 7 Si 0.685 3.315 8 C 0.070 3.930 9 N -0.570 5.570 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.575 3.425 15 O -0.526 6.526 16 N -0.712 5.712 17 C 0.122 3.878 18 H 0.108 0.892 19 C -0.135 4.135 20 C -0.076 4.076 21 H 0.101 0.899 22 C -0.071 4.071 23 C -0.067 4.067 24 C -0.025 4.025 25 C 0.250 3.750 26 N -0.413 5.413 27 C -0.074 4.074 28 C -0.115 4.115 29 C -0.087 4.087 30 C -0.144 4.144 31 H 0.088 0.912 32 H 0.096 0.904 33 H 0.067 0.933 34 H 0.116 0.884 35 H 0.378 0.622 36 H -0.252 1.252 37 H -0.255 1.255 38 H 0.186 0.814 39 H 0.426 0.574 40 H 0.162 0.838 41 H 0.399 0.601 42 H 0.101 0.899 43 H 0.079 0.921 44 H 0.132 0.868 45 H 0.133 0.867 46 H 0.135 0.865 47 H 0.132 0.868 48 H 0.076 0.924 49 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.385 4.347 -2.941 5.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.077 3.923 3 C -0.156 4.156 4 C -0.189 4.189 5 C -0.147 4.147 6 O -0.342 6.342 7 Si 0.586 3.414 8 C -0.057 4.057 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.363 3.637 15 O -0.403 6.403 16 N -0.364 5.364 17 C 0.016 3.984 18 H 0.126 0.874 19 C -0.173 4.173 20 C -0.094 4.094 21 H 0.119 0.881 22 C -0.071 4.071 23 C -0.088 4.088 24 C -0.029 4.029 25 C -0.065 4.065 26 N -0.088 5.088 27 C -0.095 4.095 28 C -0.133 4.133 29 C -0.105 4.105 30 C -0.183 4.183 31 H 0.107 0.893 32 H 0.115 0.885 33 H 0.086 0.914 34 H 0.134 0.866 35 H 0.225 0.775 36 H -0.177 1.177 37 H -0.180 1.180 38 H 0.203 0.797 39 H 0.264 0.736 40 H 0.179 0.821 41 H 0.235 0.765 42 H 0.119 0.881 43 H 0.098 0.902 44 H 0.150 0.850 45 H 0.151 0.849 46 H 0.153 0.847 47 H 0.150 0.850 48 H 0.095 0.905 49 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.588 4.142 -1.467 4.434 hybrid contribution 0.009 -0.431 0.171 0.464 sum 0.597 3.711 -1.296 3.976 Atomic orbital electron populations 1.21177 0.88715 1.03552 1.04422 1.19932 0.97156 0.89198 0.86025 1.19464 0.92791 0.93558 1.09778 1.20689 0.95357 0.91092 1.11717 1.24511 0.90395 1.10572 0.89223 1.86536 1.53606 1.77940 1.16104 0.95319 0.84469 0.76724 0.84899 1.21732 0.84972 0.95802 1.03163 1.41520 1.09632 1.02705 1.63678 1.18499 0.89337 0.85901 0.98804 1.66434 1.40564 0.96017 1.18664 1.22492 0.90056 0.94445 0.91818 1.20403 0.94744 0.93678 1.15404 1.17856 0.86822 0.83181 0.75793 1.90766 1.13515 1.86913 1.49141 1.45568 1.10476 1.05100 1.75272 1.21831 0.97296 0.81903 0.97346 0.87423 1.23440 1.00234 0.98162 0.95508 1.21693 0.99254 0.91949 0.96529 0.88120 1.19596 0.93003 0.95629 0.98902 1.21085 0.98086 0.93359 0.96248 1.15987 0.88091 0.94595 1.04195 1.25758 0.93056 0.93903 0.93822 1.81320 1.10852 1.07719 1.08866 1.21237 0.91491 0.99585 0.97141 1.21133 0.97745 0.95770 0.98679 1.21310 0.98461 0.93395 0.97366 1.23634 0.96817 0.99758 0.98048 0.89339 0.88521 0.91418 0.86645 0.77523 1.17657 1.17967 0.79703 0.73560 0.82136 0.76522 0.88090 0.90227 0.85024 0.84934 0.84690 0.84977 0.90477 0.88469 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.32 8.69 36.01 0.31 -0.01 16 2 C 0.09 0.23 5.98 -103.67 -0.62 -0.39 16 3 C -0.15 -0.31 6.16 -105.13 -0.65 -0.96 16 4 C -0.18 0.05 5.57 -102.73 -0.57 -0.52 16 5 C -0.04 0.03 2.06 36.00 0.07 0.11 16 6 O -0.54 0.22 12.88 -35.23 -0.45 -0.24 16 7 Si 0.68 -1.69 30.77 -169.99 -5.23 -6.92 16 8 C 0.07 -0.18 10.44 -16.69 -0.17 -0.36 16 9 N -0.57 0.82 6.04 -12.11 -0.07 0.75 16 10 C 0.31 0.54 8.42 -155.71 -1.31 -0.77 16 11 N -0.50 -1.04 10.37 -11.96 -0.12 -1.16 16 12 C 0.18 0.07 10.67 -17.11 -0.18 -0.12 16 13 C -0.23 -0.38 5.89 -104.82 -0.62 -1.00 16 14 C 0.58 0.89 7.72 -12.41 -0.10 0.80 16 15 O -0.53 -2.39 13.11 5.30 0.07 -2.32 16 16 N -0.71 1.24 5.22 -54.02 -0.28 0.95 16 17 C 0.12 -0.27 4.30 -67.12 -0.29 -0.56 16 18 H 0.11 -0.07 7.50 -51.93 -0.39 -0.46 16 19 C -0.14 0.53 7.29 -25.92 -0.19 0.34 16 20 C -0.08 0.28 3.86 -90.82 -0.35 -0.07 16 21 H 0.10 -0.45 8.09 -51.93 -0.42 -0.87 16 22 C -0.07 0.19 5.29 -104.68 -0.55 -0.36 16 23 C -0.07 0.12 9.41 -39.16 -0.37 -0.25 16 24 C -0.03 0.01 5.73 -106.93 -0.61 -0.60 16 25 C 0.25 0.52 15.33 -22.47 -0.34 0.18 16 26 N -0.41 -2.06 18.54 41.85 0.78 -1.28 16 27 C -0.07 0.13 9.76 -39.17 -0.38 -0.25 16 28 C -0.12 0.33 10.03 -39.64 -0.40 -0.06 16 29 C -0.09 0.27 8.61 -39.49 -0.34 -0.07 16 30 C -0.14 0.41 7.27 -25.78 -0.19 0.22 16 31 H 0.09 0.29 8.14 -51.93 -0.42 -0.13 16 32 H 0.10 0.35 5.95 -51.93 -0.31 0.04 16 33 H 0.07 0.13 5.05 -51.93 -0.26 -0.13 16 34 H 0.12 0.02 6.05 -51.93 -0.31 -0.30 16 35 H 0.38 -1.63 8.70 45.56 0.40 -1.24 16 36 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 37 H -0.26 0.00 7.11 56.52 0.40 0.40 16 38 H 0.19 -1.23 6.36 -52.49 -0.33 -1.57 16 39 H 0.43 -1.69 8.96 -40.82 -0.37 -2.06 16 40 H 0.16 -0.53 6.43 -52.49 -0.34 -0.87 16 41 H 0.40 -1.66 6.78 -40.82 -0.28 -1.94 16 42 H 0.10 -0.43 7.72 -51.93 -0.40 -0.83 16 43 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 44 H 0.13 -0.38 8.05 -52.49 -0.42 -0.80 16 45 H 0.13 -0.38 8.06 -52.48 -0.42 -0.81 16 46 H 0.14 -0.63 8.06 -52.48 -0.42 -1.05 16 47 H 0.13 -0.61 6.65 -52.49 -0.35 -0.96 16 48 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 49 H 0.10 -0.34 6.32 -51.93 -0.33 -0.66 16 LS Contribution 408.76 15.07 6.16 6.16 Total: 0.00 -11.75 408.76 -12.43 -24.18 By element: Atomic # 1 Polarization: -10.00 SS G_CDS: -5.42 Total: -15.42 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: -7.85 Total: -4.69 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: 0.30 Total: -0.74 kcal Atomic # 8 Polarization: -2.17 SS G_CDS: -0.38 Total: -2.56 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.23 Total: -6.92 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -11.75 -12.43 -24.18 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12890568.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 120.439 kcal (2) G-P(sol) polarization free energy of solvation -11.746 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.176 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.262 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds