Wall clock time and date at job start Tue Mar 9 2021 12:52:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13607 * 1 3 3 C 1.43194 * 179.97438 * 2 1 4 4 C 1.39610 * 120.15166 * 47.73321 * 3 2 1 5 5 C 1.37969 * 119.84449 * 179.97438 * 4 3 2 6 6 C 1.38348 * 120.15361 * 359.74484 * 5 4 3 7 7 C 1.38384 * 120.30104 * 0.51080 * 6 5 4 8 8 C 1.50701 * 119.92162 * 179.76944 * 7 6 5 9 9 H 1.09002 * 112.90523 * 190.97184 * 8 7 6 10 10 C 1.54050 * 113.61686 * 322.22520 * 8 7 6 11 11 C 1.53783 * 86.98283 * 139.98327 * 10 8 7 12 12 H 1.09000 * 113.61554 * 219.97995 * 11 10 8 13 13 N 1.46498 * 113.61758 * 89.15928 * 11 10 8 14 14 C 1.34777 * 119.99828 * 105.58441 * 13 11 10 15 15 O 1.21653 * 119.99988 * 0.28054 * 14 13 11 16 16 C 1.47063 * 119.99997 * 180.27721 * 14 13 11 17 17 C 1.35860 * 125.42392 * 180.02562 * 16 14 13 18 18 C 1.41600 * 107.72603 * 179.97438 * 17 16 14 19 19 C 1.40067 * 133.38046 * 180.02562 * 18 17 16 20 20 C 1.36467 * 119.82688 * 179.97438 * 19 18 17 21 21 C 1.38901 * 120.62047 * 359.96387 * 20 19 18 22 22 C 1.50695 * 119.67741 * 180.02562 * 21 20 19 23 23 O 1.42901 * 109.47376 * 120.02363 * 22 21 20 24 24 Si 1.86297 * 109.47342 * 0.02562 * 22 21 20 25 25 C 1.37719 * 120.64593 * 0.03935 * 21 20 19 26 26 C 1.39188 * 119.80800 * 359.97438 * 25 21 20 27 27 N 1.37485 * 133.18595 * 180.32274 * 26 25 21 28 28 C 1.53775 * 113.61778 * 59.72301 * 8 7 6 29 29 C 1.37932 * 120.15167 * 359.48448 * 7 6 5 30 30 H 1.08000 * 120.07952 * 359.94979 * 4 3 2 31 31 H 1.08003 * 119.92565 * 179.97438 * 5 4 3 32 32 H 1.07995 * 119.84601 * 180.27885 * 6 5 4 33 33 H 1.08997 * 113.61361 * 25.47943 * 10 8 7 34 34 H 1.09001 * 113.69604 * 254.49525 * 10 8 7 35 35 H 0.97001 * 120.00384 * 285.86888 * 13 11 10 36 36 H 1.07998 * 126.13941 * 359.92633 * 17 16 14 37 37 H 1.08005 * 120.08509 * 0.02562 * 19 18 17 38 38 H 1.08005 * 119.69279 * 179.97438 * 20 19 18 39 39 H 1.09009 * 109.46645 * 240.01849 * 22 21 20 40 40 H 0.96701 * 113.99720 * 299.99605 * 23 22 21 41 41 H 1.48500 * 110.00011 * 180.02562 * 24 22 21 42 42 H 1.48497 * 110.00315 * 301.32538 * 24 22 21 43 43 H 1.08000 * 120.09758 * 180.02562 * 25 21 20 44 44 H 0.96992 * 125.60801 * 359.95378 * 27 26 25 45 45 H 1.09000 * 113.62018 * 105.46740 * 28 8 7 46 46 H 1.09001 * 113.68869 * 334.57763 * 28 8 7 47 47 H 1.08003 * 120.07365 * 180.27695 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2696 -0.8110 -0.8934 5 6 4.6493 -0.8050 -0.8882 6 6 5.3374 0.0067 -0.0042 7 6 4.6483 0.8098 0.8876 8 6 5.4066 1.6868 1.8503 9 1 4.7692 2.1218 2.6201 10 6 6.6855 1.0318 2.4057 11 6 7.3561 2.4080 2.2600 12 1 8.3818 2.3574 1.8945 13 7 7.2158 3.2577 3.4450 14 6 8.2694 3.4536 4.2623 15 8 9.3383 2.9289 4.0132 16 6 8.1270 4.3017 5.4553 17 6 9.1121 4.5734 6.3506 18 6 8.5689 5.4227 7.3448 19 6 9.0997 6.0187 8.4959 20 6 8.3082 6.8090 9.2777 21 6 6.9783 7.0299 8.9430 22 6 6.1236 7.9068 9.8213 23 8 5.6412 9.0165 9.0612 24 14 7.1394 8.5298 11.2533 25 6 6.4332 6.4551 7.8165 26 6 7.2202 5.6449 7.0032 27 7 6.9717 4.9538 5.8409 28 6 6.3244 2.7094 1.1602 29 6 3.2690 0.8137 0.8932 30 1 2.7337 -1.4424 -1.5866 31 1 5.1934 -1.4327 -1.5785 32 1 6.4174 0.0108 -0.0075 33 1 7.1059 0.2695 1.7498 34 1 6.5935 0.6982 3.4394 35 1 6.3635 3.6761 3.6438 36 1 10.1272 4.2067 6.3114 37 1 10.1330 5.8539 8.7635 38 1 8.7197 7.2671 10.1650 39 1 5.2790 7.3301 10.1984 40 1 6.3399 9.5751 8.6939 41 1 6.3076 9.3954 12.1274 42 1 7.6735 7.3847 12.0335 43 1 5.3982 6.6331 7.5643 44 1 6.1242 4.9269 5.3701 45 1 5.9412 3.7294 1.1888 46 1 6.6469 2.4063 0.1641 47 1 2.7324 1.4443 1.5867 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_13158378.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:15 Heat of formation + Delta-G solvation = 80.758276 kcal Electronic energy + Delta-G solvation = -31045.937474 eV Core-core repulsion = 26740.586039 eV Total energy + Delta-G solvation = -4305.351435 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.142 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.75916 -41.73168 -40.50576 -39.33505 -38.80039 -37.36011 -36.93422 -34.84976 -33.30865 -32.45786 -32.26805 -31.04395 -30.44207 -27.38352 -26.99065 -26.24566 -25.11413 -24.37394 -23.27469 -23.00385 -22.06842 -21.32493 -20.95796 -19.63656 -19.19318 -18.46796 -17.85138 -17.55365 -17.22853 -16.91978 -16.72648 -16.52921 -16.19378 -16.02188 -15.77456 -15.56713 -15.33644 -15.12108 -15.04443 -14.93017 -14.81255 -14.58252 -14.46196 -14.21424 -14.11883 -14.08387 -13.77890 -13.71474 -13.18678 -13.16320 -13.02212 -12.75383 -12.63015 -12.56456 -12.06946 -11.99396 -11.96698 -11.67785 -11.50298 -11.32904 -10.97590 -10.48746 -10.35597 -10.13041 -9.90506 -9.36195 -8.86680 -5.03234 -0.38539 -0.36292 0.10980 0.48387 0.95276 1.26981 1.63280 1.64812 1.68751 1.81671 1.85413 1.97917 2.19032 2.70930 2.74285 2.77776 3.16877 3.37932 3.40880 3.43455 3.52307 3.59855 3.62376 3.66976 3.70146 3.85669 3.89423 3.97119 4.03761 4.20540 4.24675 4.25334 4.37000 4.42038 4.43886 4.47560 4.51417 4.54426 4.62445 4.68889 4.76267 4.78448 4.85262 4.86392 4.93016 5.11385 5.14597 5.20859 5.30712 5.35987 5.39261 5.48993 5.56944 5.62131 5.92315 6.12250 6.27578 6.45714 6.53066 6.91501 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.411 5.411 2 C 0.249 3.751 3 C -0.025 4.025 4 C -0.073 4.073 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.073 4.073 8 C -0.075 4.075 9 H 0.099 0.901 10 C -0.144 4.144 11 C 0.119 3.881 12 H 0.111 0.889 13 N -0.713 5.713 14 C 0.589 3.411 15 O -0.514 6.514 16 C 0.011 3.989 17 C -0.097 4.097 18 C -0.117 4.117 19 C -0.050 4.050 20 C -0.146 4.146 21 C -0.087 4.087 22 C -0.069 4.069 23 O -0.541 6.541 24 Si 0.693 3.307 25 C -0.105 4.105 26 C 0.116 3.884 27 N -0.579 5.579 28 C -0.135 4.135 29 C -0.067 4.067 30 H 0.133 0.867 31 H 0.136 0.864 32 H 0.133 0.867 33 H 0.100 0.900 34 H 0.077 0.923 35 H 0.396 0.604 36 H 0.159 0.841 37 H 0.132 0.868 38 H 0.129 0.871 39 H 0.114 0.886 40 H 0.380 0.620 41 H -0.256 1.256 42 H -0.257 1.257 43 H 0.127 0.873 44 H 0.417 0.583 45 H 0.078 0.922 46 H 0.103 0.897 47 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.123 1.717 -1.379 4.675 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.086 5.086 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.073 4.073 8 C -0.094 4.094 9 H 0.117 0.883 10 C -0.182 4.182 11 C 0.014 3.986 12 H 0.128 0.872 13 N -0.364 5.364 14 C 0.375 3.625 15 O -0.388 6.388 16 C -0.097 4.097 17 C -0.124 4.124 18 C -0.122 4.122 19 C -0.068 4.068 20 C -0.165 4.165 21 C -0.089 4.089 22 C -0.179 4.179 23 O -0.346 6.346 24 Si 0.595 3.405 25 C -0.125 4.125 26 C 0.006 3.994 27 N -0.184 5.184 28 C -0.173 4.173 29 C -0.088 4.088 30 H 0.151 0.849 31 H 0.154 0.846 32 H 0.150 0.850 33 H 0.118 0.882 34 H 0.096 0.904 35 H 0.231 0.769 36 H 0.177 0.823 37 H 0.150 0.850 38 H 0.147 0.853 39 H 0.131 0.869 40 H 0.227 0.773 41 H -0.181 1.181 42 H -0.182 1.182 43 H 0.145 0.855 44 H 0.255 0.745 45 H 0.097 0.903 46 H 0.122 0.878 47 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 2.561 1.044 -0.663 2.844 hybrid contribution -1.043 -0.376 -0.445 1.194 sum 1.518 0.668 -1.109 1.995 Atomic orbital electron populations 1.81318 1.12056 1.07688 1.07551 1.25744 0.92703 0.94086 0.94093 1.15983 0.84310 1.01847 1.00651 1.21252 0.94536 0.96800 0.96767 1.21142 0.93574 0.99292 0.99246 1.21307 1.00678 0.94546 0.93988 1.19565 0.92710 0.97765 0.97224 1.21681 0.95139 0.95931 0.96619 0.88295 1.23641 0.94863 0.96984 1.02711 1.21901 1.01098 0.90460 0.85108 0.87150 1.45555 1.13356 1.51198 1.26253 1.17175 0.84105 0.79923 0.81250 1.90890 1.26573 1.48858 1.72479 1.20052 0.87622 1.03096 0.98970 1.20987 0.99297 0.99127 0.93021 1.18229 0.93173 1.02816 0.97979 1.20387 0.99845 0.94634 0.91982 1.20495 0.93320 1.01802 1.00864 1.20044 0.94385 0.98576 0.95910 1.25082 1.02641 0.89019 1.01189 1.86501 1.36879 1.39340 1.71900 0.94555 0.84387 0.84164 0.77403 1.19860 0.99478 0.98384 0.94788 1.18305 0.95327 0.97274 0.88466 1.41880 1.11774 1.42628 1.22083 1.23442 0.95388 0.99742 0.98689 1.21070 0.93650 0.97022 0.97058 0.84861 0.84616 0.84952 0.88200 0.90428 0.76941 0.82339 0.84968 0.85326 0.86868 0.77266 1.18123 1.18204 0.85527 0.74536 0.90301 0.87847 0.85096 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.92 18.54 41.84 0.78 -1.15 16 2 C 0.25 0.43 15.33 -22.47 -0.34 0.09 16 3 C -0.02 0.02 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.16 9.76 -39.17 -0.38 -0.22 16 5 C -0.11 0.38 10.03 -39.64 -0.40 -0.01 16 6 C -0.09 0.31 8.59 -39.49 -0.34 -0.03 16 7 C -0.07 0.23 5.28 -104.68 -0.55 -0.32 16 8 C -0.08 0.33 3.87 -90.82 -0.35 -0.02 16 9 H 0.10 -0.51 8.09 -51.93 -0.42 -0.93 16 10 C -0.14 0.50 7.27 -25.78 -0.19 0.32 16 11 C 0.12 -0.35 4.29 -67.12 -0.29 -0.64 16 12 H 0.11 -0.15 7.50 -51.93 -0.39 -0.54 16 13 N -0.71 1.88 5.26 -54.20 -0.29 1.59 16 14 C 0.59 0.43 7.80 -12.68 -0.10 0.33 16 15 O -0.51 -2.25 16.46 5.23 0.09 -2.16 16 16 C 0.01 0.00 6.97 -82.29 -0.57 -0.57 16 17 C -0.10 -0.11 10.53 -39.15 -0.41 -0.52 16 18 C -0.12 -0.11 6.16 -106.93 -0.66 -0.77 16 19 C -0.05 0.01 10.06 -39.53 -0.40 -0.38 16 20 C -0.15 0.12 8.59 -39.97 -0.34 -0.22 16 21 C -0.09 0.04 5.40 -104.57 -0.56 -0.53 16 22 C -0.07 0.06 2.81 36.00 0.10 0.16 16 23 O -0.54 0.26 12.76 -35.23 -0.45 -0.19 16 24 Si 0.69 -1.06 29.75 -169.99 -5.06 -6.12 16 25 C -0.10 0.01 9.61 -39.42 -0.38 -0.37 16 26 C 0.12 0.04 7.25 -83.97 -0.61 -0.57 16 27 N -0.58 0.87 6.07 -7.35 -0.04 0.83 16 28 C -0.13 0.62 7.28 -25.92 -0.19 0.43 16 29 C -0.07 0.15 9.41 -39.17 -0.37 -0.22 16 30 H 0.13 -0.44 8.06 -52.49 -0.42 -0.86 16 31 H 0.14 -0.69 8.06 -52.48 -0.42 -1.11 16 32 H 0.13 -0.69 6.66 -52.49 -0.35 -1.04 16 33 H 0.10 -0.41 6.32 -51.93 -0.33 -0.74 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.40 -2.06 7.76 -40.82 -0.32 -2.38 16 36 H 0.16 0.08 8.06 -52.49 -0.42 -0.34 16 37 H 0.13 -0.29 8.06 -52.48 -0.42 -0.72 16 38 H 0.13 -0.34 4.82 -52.48 -0.25 -0.59 16 39 H 0.11 -0.06 7.96 -51.92 -0.41 -0.47 16 40 H 0.38 -1.60 8.70 45.56 0.40 -1.21 16 41 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 42 H -0.26 -0.21 7.10 56.52 0.40 0.20 16 43 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 44 H 0.42 -1.91 8.12 -40.82 -0.33 -2.24 16 45 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 46 H 0.10 -0.51 7.72 -51.93 -0.40 -0.91 16 47 H 0.13 -0.44 8.05 -52.48 -0.42 -0.86 16 LS Contribution 403.36 15.07 6.08 6.08 Total: 0.00 -10.31 403.36 -12.23 -22.54 By element: Atomic # 1 Polarization: -11.37 SS G_CDS: -5.39 Total: -16.76 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -7.95 Total: -4.67 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: 0.45 Total: 1.28 kcal Atomic # 8 Polarization: -1.99 SS G_CDS: -0.36 Total: -2.35 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.06 Total: -6.12 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -10.31 -12.23 -22.54 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13158378.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.298 kcal (2) G-P(sol) polarization free energy of solvation -10.308 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.540 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds