Wall clock time and date at job start Tue Mar 9 2021 12:52:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13607 * 1 3 3 C 1.43194 * 179.97438 * 2 1 4 4 C 1.39610 * 120.15166 * 47.73321 * 3 2 1 5 5 C 1.37969 * 119.84449 * 179.97438 * 4 3 2 6 6 C 1.38348 * 120.15361 * 359.74484 * 5 4 3 7 7 C 1.38384 * 120.30104 * 0.51080 * 6 5 4 8 8 C 1.50701 * 119.92162 * 179.76944 * 7 6 5 9 9 H 1.09002 * 112.90523 * 190.97184 * 8 7 6 10 10 C 1.54050 * 113.61686 * 322.22520 * 8 7 6 11 11 C 1.53783 * 86.98283 * 139.98327 * 10 8 7 12 12 H 1.09000 * 113.61554 * 219.97995 * 11 10 8 13 13 N 1.46498 * 113.61758 * 89.15928 * 11 10 8 14 14 C 1.34777 * 119.99828 * 105.58441 * 13 11 10 15 15 O 1.21653 * 119.99988 * 0.28054 * 14 13 11 16 16 C 1.47063 * 119.99997 * 180.27721 * 14 13 11 17 17 C 1.35860 * 125.42392 * 180.02562 * 16 14 13 18 18 C 1.41600 * 107.72603 * 179.97438 * 17 16 14 19 19 C 1.40067 * 133.38046 * 180.02562 * 18 17 16 20 20 C 1.36467 * 119.82688 * 179.97438 * 19 18 17 21 21 C 1.38901 * 120.62047 * 359.96387 * 20 19 18 22 22 C 1.50695 * 119.67741 * 180.02562 * 21 20 19 23 23 O 1.42901 * 109.47376 * 120.02363 * 22 21 20 24 24 Si 1.86297 * 109.47342 * 0.02562 * 22 21 20 25 25 C 1.37719 * 120.64593 * 0.03935 * 21 20 19 26 26 C 1.39188 * 119.80800 * 359.97438 * 25 21 20 27 27 N 1.37485 * 133.18595 * 180.32274 * 26 25 21 28 28 C 1.53775 * 113.61778 * 59.72301 * 8 7 6 29 29 C 1.37932 * 120.15167 * 359.48448 * 7 6 5 30 30 H 1.08000 * 120.07952 * 359.94979 * 4 3 2 31 31 H 1.08003 * 119.92565 * 179.97438 * 5 4 3 32 32 H 1.07995 * 119.84601 * 180.27885 * 6 5 4 33 33 H 1.08997 * 113.61361 * 25.47943 * 10 8 7 34 34 H 1.09001 * 113.69604 * 254.49525 * 10 8 7 35 35 H 0.97001 * 120.00384 * 285.86888 * 13 11 10 36 36 H 1.07998 * 126.13941 * 359.92633 * 17 16 14 37 37 H 1.08005 * 120.08509 * 0.02562 * 19 18 17 38 38 H 1.08005 * 119.69279 * 179.97438 * 20 19 18 39 39 H 1.09009 * 109.46645 * 240.01849 * 22 21 20 40 40 H 0.96701 * 113.99720 * 299.99605 * 23 22 21 41 41 H 1.48500 * 110.00011 * 180.02562 * 24 22 21 42 42 H 1.48497 * 110.00315 * 301.32538 * 24 22 21 43 43 H 1.08000 * 120.09758 * 180.02562 * 25 21 20 44 44 H 0.96992 * 125.60801 * 359.95378 * 27 26 25 45 45 H 1.09000 * 113.62018 * 105.46740 * 28 8 7 46 46 H 1.09001 * 113.68869 * 334.57763 * 28 8 7 47 47 H 1.08003 * 120.07365 * 180.27695 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2696 -0.8110 -0.8934 5 6 4.6493 -0.8050 -0.8882 6 6 5.3374 0.0067 -0.0042 7 6 4.6483 0.8098 0.8876 8 6 5.4066 1.6868 1.8503 9 1 4.7692 2.1218 2.6201 10 6 6.6855 1.0318 2.4057 11 6 7.3561 2.4080 2.2600 12 1 8.3818 2.3574 1.8945 13 7 7.2158 3.2577 3.4450 14 6 8.2694 3.4536 4.2623 15 8 9.3383 2.9289 4.0132 16 6 8.1270 4.3017 5.4553 17 6 9.1121 4.5734 6.3506 18 6 8.5689 5.4227 7.3448 19 6 9.0997 6.0187 8.4959 20 6 8.3082 6.8090 9.2777 21 6 6.9783 7.0299 8.9430 22 6 6.1236 7.9068 9.8213 23 8 5.6412 9.0165 9.0612 24 14 7.1394 8.5298 11.2533 25 6 6.4332 6.4551 7.8165 26 6 7.2202 5.6449 7.0032 27 7 6.9717 4.9538 5.8409 28 6 6.3244 2.7094 1.1602 29 6 3.2690 0.8137 0.8932 30 1 2.7337 -1.4424 -1.5866 31 1 5.1934 -1.4327 -1.5785 32 1 6.4174 0.0108 -0.0075 33 1 7.1059 0.2695 1.7498 34 1 6.5935 0.6982 3.4394 35 1 6.3635 3.6761 3.6438 36 1 10.1272 4.2067 6.3114 37 1 10.1330 5.8539 8.7635 38 1 8.7197 7.2671 10.1650 39 1 5.2790 7.3301 10.1984 40 1 6.3399 9.5751 8.6939 41 1 6.3076 9.3954 12.1274 42 1 7.6735 7.3847 12.0335 43 1 5.3982 6.6331 7.5643 44 1 6.1242 4.9269 5.3701 45 1 5.9412 3.7294 1.1888 46 1 6.6469 2.4063 0.1641 47 1 2.7324 1.4443 1.5867 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_13158378.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:14 Heat of formation + Delta-G solvation = 82.646249 kcal Electronic energy + Delta-G solvation = -31045.855605 eV Core-core repulsion = 26740.586039 eV Total energy + Delta-G solvation = -4305.269566 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.142 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.71953 -41.52961 -40.42788 -39.22125 -38.76317 -37.48148 -36.87119 -34.77433 -33.26517 -32.25152 -32.09937 -30.98167 -30.39213 -27.29667 -26.68191 -26.05848 -24.97412 -24.28362 -23.21480 -22.79402 -22.01990 -21.29446 -20.79720 -19.55745 -19.02545 -18.39518 -17.79180 -17.32203 -17.04254 -16.83876 -16.58059 -16.50394 -16.12535 -15.85883 -15.69972 -15.50653 -15.24675 -15.12008 -14.97147 -14.80634 -14.72277 -14.54198 -14.41060 -14.18734 -14.09935 -14.01131 -13.80739 -13.42890 -13.13676 -13.00754 -12.81034 -12.57589 -12.51545 -12.50540 -12.02465 -11.81353 -11.71949 -11.63415 -11.39741 -11.23765 -10.95946 -10.42569 -10.24444 -9.92451 -9.67879 -9.32359 -8.82574 -4.94018 -0.37133 -0.20579 0.36066 0.53126 0.94528 1.35272 1.54131 1.68560 1.74230 1.88947 1.94574 2.03045 2.17157 2.77953 2.80884 2.84053 3.45000 3.49531 3.60104 3.68566 3.70415 3.73606 3.74764 3.91536 3.98433 4.05029 4.16437 4.18658 4.25883 4.30305 4.30917 4.45023 4.49957 4.50565 4.61096 4.68240 4.75626 4.82476 4.86462 4.89397 4.97442 4.99307 5.03470 5.06328 5.14515 5.30581 5.33594 5.40504 5.41479 5.47909 5.54348 5.58519 5.64818 5.88612 5.98589 6.25216 6.37623 6.43217 6.80064 6.95629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.276 3.724 3 C -0.046 4.046 4 C -0.076 4.076 5 C -0.116 4.116 6 C -0.082 4.082 7 C -0.074 4.074 8 C -0.068 4.068 9 H 0.109 0.891 10 C -0.142 4.142 11 C 0.111 3.889 12 H 0.094 0.906 13 N -0.696 5.696 14 C 0.589 3.411 15 O -0.557 6.557 16 C 0.011 3.989 17 C -0.118 4.118 18 C -0.135 4.135 19 C -0.058 4.058 20 C -0.148 4.148 21 C -0.089 4.089 22 C -0.071 4.071 23 O -0.555 6.555 24 Si 0.777 3.223 25 C -0.110 4.110 26 C 0.107 3.893 27 N -0.564 5.564 28 C -0.123 4.123 29 C -0.068 4.068 30 H 0.139 0.861 31 H 0.155 0.845 32 H 0.151 0.849 33 H 0.108 0.892 34 H 0.065 0.935 35 H 0.411 0.589 36 H 0.156 0.844 37 H 0.148 0.852 38 H 0.146 0.854 39 H 0.109 0.891 40 H 0.396 0.604 41 H -0.303 1.303 42 H -0.286 1.286 43 H 0.134 0.866 44 H 0.431 0.569 45 H 0.086 0.914 46 H 0.111 0.889 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.652 2.099 -1.853 5.430 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.038 4.038 3 C -0.050 4.050 4 C -0.097 4.097 5 C -0.134 4.134 6 C -0.101 4.101 7 C -0.074 4.074 8 C -0.086 4.086 9 H 0.128 0.872 10 C -0.180 4.180 11 C 0.006 3.994 12 H 0.112 0.888 13 N -0.347 5.347 14 C 0.376 3.624 15 O -0.435 6.435 16 C -0.099 4.099 17 C -0.145 4.145 18 C -0.140 4.140 19 C -0.076 4.076 20 C -0.167 4.167 21 C -0.091 4.091 22 C -0.181 4.181 23 O -0.363 6.363 24 Si 0.684 3.316 25 C -0.131 4.131 26 C -0.003 4.003 27 N -0.170 5.170 28 C -0.161 4.161 29 C -0.089 4.089 30 H 0.157 0.843 31 H 0.173 0.827 32 H 0.169 0.831 33 H 0.126 0.874 34 H 0.084 0.916 35 H 0.247 0.753 36 H 0.174 0.826 37 H 0.165 0.835 38 H 0.163 0.837 39 H 0.126 0.874 40 H 0.246 0.754 41 H -0.231 1.231 42 H -0.213 1.213 43 H 0.152 0.848 44 H 0.272 0.728 45 H 0.105 0.895 46 H 0.130 0.870 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.042 1.438 -1.186 3.568 hybrid contribution -1.152 -0.493 -0.282 1.284 sum 1.890 0.945 -1.468 2.573 Atomic orbital electron populations 1.81325 1.13819 1.10037 1.09843 1.26189 0.93122 0.92258 0.92266 1.16104 0.82837 1.03677 1.02373 1.21417 0.95229 0.96519 0.96506 1.21394 0.93077 0.99420 0.99532 1.21608 1.01723 0.93594 0.93142 1.19670 0.92297 0.97989 0.97489 1.21667 0.94759 0.95602 0.96580 0.87243 1.23645 0.95285 0.96752 1.02317 1.21990 1.00849 0.91100 0.85448 0.88806 1.45450 1.13161 1.50446 1.25606 1.17239 0.84109 0.79553 0.81482 1.90865 1.28313 1.50739 1.73570 1.19991 0.88082 1.03082 0.98750 1.21109 0.99652 0.99921 0.93789 1.18450 0.93722 1.03252 0.98537 1.20638 1.00800 0.94498 0.91691 1.20690 0.93159 1.01569 1.01246 1.20151 0.94623 0.98493 0.95860 1.25150 1.02512 0.89023 1.01400 1.86465 1.38194 1.39620 1.72031 0.93579 0.82304 0.80762 0.74995 1.19980 0.99826 0.98384 0.94884 1.18432 0.95298 0.97609 0.88989 1.41778 1.11924 1.41716 1.21600 1.23409 0.94188 1.00169 0.98315 1.21201 0.94176 0.96736 0.96783 0.84286 0.82691 0.83097 0.87396 0.91585 0.75256 0.82646 0.83455 0.83682 0.87393 0.75415 1.23109 1.21281 0.84806 0.72828 0.89491 0.87042 0.84320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.21 18.54 19.00 0.35 -4.86 16 2 C 0.28 1.22 15.33 88.33 1.35 2.58 16 3 C -0.05 0.10 5.73 -21.36 -0.12 -0.03 16 4 C -0.08 0.38 9.76 22.54 0.22 0.60 16 5 C -0.12 0.96 10.03 22.23 0.22 1.19 16 6 C -0.08 0.75 8.59 22.33 0.19 0.94 16 7 C -0.07 0.59 5.28 -19.90 -0.11 0.49 16 8 C -0.07 0.70 3.87 -10.92 -0.04 0.66 16 9 H 0.11 -1.34 8.09 -2.39 -0.02 -1.36 16 10 C -0.14 1.12 7.27 31.21 0.23 1.35 16 11 C 0.11 -0.71 4.29 45.52 0.20 -0.52 16 12 H 0.09 -0.23 7.50 -2.39 -0.02 -0.24 16 13 N -0.70 3.93 5.26 -443.64 -2.33 1.60 16 14 C 0.59 1.21 7.80 86.56 0.68 1.89 16 15 O -0.56 -5.69 16.46 -4.20 -0.07 -5.75 16 16 C 0.01 0.01 6.97 39.91 0.28 0.29 16 17 C -0.12 -0.40 10.53 22.55 0.24 -0.16 16 18 C -0.14 -0.32 6.16 -21.36 -0.13 -0.45 16 19 C -0.06 0.03 10.06 22.30 0.22 0.26 16 20 C -0.15 0.32 8.59 22.01 0.19 0.51 16 21 C -0.09 0.12 5.40 -19.83 -0.11 0.01 16 22 C -0.07 0.15 2.81 71.23 0.20 0.35 16 23 O -0.56 0.91 12.76 -148.98 -1.90 -0.99 16 24 Si 0.78 -2.51 29.75 68.60 2.04 -0.47 16 25 C -0.11 0.06 9.61 22.38 0.22 0.28 16 26 C 0.11 0.06 7.25 39.13 0.28 0.34 16 27 N -0.56 1.83 6.07 -177.18 -1.08 0.76 16 28 C -0.12 1.34 7.28 31.12 0.23 1.56 16 29 C -0.07 0.36 9.41 22.54 0.21 0.57 16 30 H 0.14 -0.94 8.06 -2.91 -0.02 -0.97 16 31 H 0.16 -1.91 8.06 -2.91 -0.02 -1.93 16 32 H 0.15 -1.95 6.66 -2.91 -0.02 -1.97 16 33 H 0.11 -1.03 6.32 -2.39 -0.02 -1.05 16 34 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 35 H 0.41 -4.74 7.76 -92.71 -0.72 -5.46 16 36 H 0.16 0.46 8.06 -2.91 -0.02 0.44 16 37 H 0.15 -0.67 8.06 -2.91 -0.02 -0.70 16 38 H 0.15 -0.90 4.82 -2.91 -0.01 -0.92 16 39 H 0.11 -0.12 7.96 -2.38 -0.02 -0.14 16 40 H 0.40 -3.72 8.70 -74.06 -0.64 -4.36 16 41 H -0.30 -1.40 7.11 99.48 0.71 -0.69 16 42 H -0.29 -0.44 7.10 99.48 0.71 0.26 16 43 H 0.13 -0.34 8.06 -2.91 -0.02 -0.36 16 44 H 0.43 -4.33 8.12 -92.71 -0.75 -5.08 16 45 H 0.09 -1.03 8.14 -2.39 -0.02 -1.05 16 46 H 0.11 -1.33 7.72 -2.39 -0.02 -1.35 16 47 H 0.14 -1.03 8.05 -2.91 -0.02 -1.05 16 Total: 0.00 -25.98 403.36 0.65 -25.33 By element: Atomic # 1 Polarization: -27.32 SS G_CDS: -1.00 Total: -28.33 kcal Atomic # 6 Polarization: 8.07 SS G_CDS: 4.64 Total: 12.72 kcal Atomic # 7 Polarization: 0.55 SS G_CDS: -3.06 Total: -2.51 kcal Atomic # 8 Polarization: -4.78 SS G_CDS: -1.97 Total: -6.75 kcal Atomic # 14 Polarization: -2.51 SS G_CDS: 2.04 Total: -0.47 kcal Total: -25.98 0.65 -25.33 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13158378.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.976 kcal (2) G-P(sol) polarization free energy of solvation -25.983 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.993 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.329 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.646 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds