Wall clock time and date at job start Tue Mar 9 2021 12:52:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39615 * 120.15114 * 68.35083 * 3 2 1 5 5 C 1.37970 * 119.84533 * 179.74598 * 4 3 2 6 6 C 1.38338 * 120.15003 * 0.48986 * 5 4 3 7 7 C 1.38387 * 120.30572 * 359.48407 * 6 5 4 8 8 C 1.50700 * 119.92418 * 180.25855 * 7 6 5 9 9 H 1.09001 * 112.85052 * 168.80048 * 8 7 6 10 10 C 1.53782 * 113.61431 * 300.00142 * 8 7 6 11 11 C 1.53778 * 87.08020 * 139.98123 * 10 8 7 12 12 H 1.08996 * 113.61469 * 220.01961 * 11 10 8 13 13 N 1.46502 * 113.61587 * 89.11352 * 11 10 8 14 14 C 1.34780 * 119.99732 * 154.99691 * 13 11 10 15 15 O 1.21570 * 120.00118 * 0.02562 * 14 13 11 16 16 C 1.47658 * 119.99571 * 180.02562 * 14 13 11 17 17 C 1.40174 * 119.97524 * 0.02562 * 16 14 13 18 18 C 1.36348 * 120.66493 * 179.97438 * 17 16 14 19 19 C 1.39321 * 120.23955 * 359.97186 * 18 17 16 20 20 N 1.37410 * 133.25024 * 180.02562 * 19 18 17 21 21 C 1.36859 * 109.98040 * 180.02562 * 20 19 18 22 22 C 1.34188 * 109.96979 * 359.97438 * 21 20 19 23 23 C 1.50698 * 126.53954 * 180.02562 * 22 21 20 24 24 O 1.42893 * 109.47159 * 104.96240 * 23 22 21 25 25 Si 1.86294 * 109.47251 * 344.95748 * 23 22 21 26 26 C 1.40905 * 119.64695 * 0.02562 * 19 18 17 27 27 C 1.39190 * 119.97302 * 179.72525 * 16 14 13 28 28 C 1.53782 * 87.08329 * 334.56581 * 11 10 8 29 29 C 1.37927 * 120.15064 * 0.28085 * 7 6 5 30 30 H 1.08003 * 120.07596 * 359.97438 * 4 3 2 31 31 H 1.08000 * 119.92180 * 180.24933 * 5 4 3 32 32 H 1.08002 * 119.84938 * 179.76937 * 6 5 4 33 33 H 1.09007 * 113.61163 * 254.52844 * 10 8 7 34 34 H 1.08997 * 113.61321 * 25.34957 * 10 8 7 35 35 H 0.96998 * 119.99860 * 335.00555 * 13 11 10 36 36 H 1.07998 * 119.65922 * 359.94730 * 17 16 14 37 37 H 1.08002 * 119.87565 * 179.97438 * 18 17 16 38 38 H 0.96999 * 125.00549 * 359.95722 * 20 19 18 39 39 H 1.08004 * 125.01451 * 180.02562 * 21 20 19 40 40 H 1.09008 * 109.47042 * 224.95625 * 23 22 21 41 41 H 0.96696 * 114.00013 * 299.99530 * 24 23 22 42 42 H 1.48497 * 109.99997 * 58.68229 * 25 23 22 43 43 H 1.48508 * 109.99892 * 180.02562 * 25 23 22 44 44 H 1.08008 * 120.29880 * 359.97438 * 27 16 14 45 45 H 1.08999 * 113.61739 * 270.88504 * 28 11 10 46 46 H 1.09001 * 113.61328 * 139.98021 * 28 11 10 47 47 H 1.08005 * 120.07543 * 179.97438 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2694 -0.4444 -1.1221 5 6 4.6491 -0.4362 -1.1172 6 6 5.3374 0.0022 -0.0002 7 6 4.6484 0.4452 1.1153 8 6 5.4069 0.9264 2.3253 9 1 4.7684 1.4257 3.0542 10 6 6.3262 -0.1416 2.9410 11 6 7.3569 0.9800 3.1520 12 1 8.3825 0.6752 2.9442 13 7 7.2166 1.6721 4.4356 14 6 8.2794 2.2907 4.9873 15 8 9.3542 2.2748 4.4195 16 6 8.1381 2.9877 6.2813 17 6 6.8986 3.0052 6.9357 18 6 6.7524 3.6442 8.1313 19 6 7.8382 4.2894 8.7194 20 7 7.9931 4.9978 9.8866 21 6 9.2854 5.4335 10.0012 22 6 10.0000 5.0331 8.9383 23 6 11.4600 5.3063 8.6841 24 8 12.2165 4.1190 8.9291 25 14 12.0453 6.6612 9.8210 26 6 9.0895 4.2791 8.0717 27 6 9.2373 3.6216 6.8534 28 6 6.6826 1.7128 1.9802 29 6 3.2692 0.4469 1.1222 30 1 2.7333 -0.7909 -1.9933 31 1 5.1929 -0.7764 -1.9861 32 1 6.4174 0.0031 -0.0002 33 1 5.9438 -0.5637 3.8704 34 1 6.6472 -0.9034 2.2306 35 1 6.3589 1.6849 4.8885 36 1 6.0509 2.5080 6.4880 37 1 5.7915 3.6500 8.6242 38 1 7.2899 5.1652 10.5334 39 1 9.6732 6.0132 10.8258 40 1 11.5967 5.6169 7.6482 41 1 12.1420 3.7847 9.8333 42 1 11.8350 6.2630 11.2360 43 1 13.4838 6.9405 9.5798 44 1 10.1955 3.6061 6.3552 45 1 7.1022 1.4587 1.0068 46 1 6.5879 2.7877 2.1339 47 1 2.7327 0.7925 1.9936 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_13287722.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:26 Heat of formation + Delta-G solvation = 80.553415 kcal Electronic energy + Delta-G solvation = -31237.846337 eV Core-core repulsion = 26932.486019 eV Total energy + Delta-G solvation = -4305.360318 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.142 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.52689 -41.67572 -40.51110 -39.15354 -37.97405 -37.44336 -37.26516 -34.60615 -33.31055 -32.38513 -32.17783 -30.79366 -30.39574 -26.83604 -26.57236 -26.47736 -25.16530 -24.47100 -23.53035 -22.94415 -21.73107 -20.83835 -20.75088 -19.40828 -19.07423 -18.46258 -17.58185 -17.43684 -17.37178 -17.03565 -16.68325 -16.26524 -16.07689 -15.83631 -15.70275 -15.60710 -15.21251 -15.07023 -15.05126 -14.80808 -14.76080 -14.55712 -14.16582 -14.14487 -14.00852 -13.77439 -13.70047 -13.59619 -13.54056 -13.07846 -12.92115 -12.65372 -12.59238 -12.46577 -12.13949 -11.94609 -11.79952 -11.79411 -11.34131 -10.86173 -10.82244 -10.47955 -10.08697 -10.04852 -9.81409 -9.35955 -8.86747 -4.97409 -0.29179 -0.07976 0.15479 0.18948 1.28553 1.44237 1.54258 1.70305 1.91730 1.92432 1.95760 1.99080 2.10449 2.77981 2.84261 2.93389 3.33332 3.48119 3.53509 3.54550 3.61109 3.69178 3.72235 3.76994 3.80570 3.85613 3.95322 3.99479 4.05101 4.12482 4.32400 4.34477 4.39601 4.46692 4.55437 4.56954 4.59718 4.64357 4.75268 4.79773 4.82436 4.86943 4.94170 4.99413 5.03833 5.18817 5.22035 5.23577 5.34213 5.39922 5.47315 5.57301 5.60209 5.69842 5.94875 6.32026 6.50998 6.51127 6.52129 7.29929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.413 5.413 2 C 0.251 3.749 3 C -0.026 4.026 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.071 4.071 8 C -0.075 4.075 9 H 0.100 0.900 10 C -0.136 4.136 11 C 0.120 3.880 12 H 0.107 0.893 13 N -0.712 5.712 14 C 0.568 3.432 15 O -0.534 6.534 16 C -0.169 4.169 17 C -0.066 4.066 18 C -0.134 4.134 19 C 0.119 3.881 20 N -0.585 5.585 21 C 0.059 3.941 22 C -0.187 4.187 23 C -0.042 4.042 24 O -0.528 6.528 25 Si 0.686 3.314 26 C -0.102 4.102 27 C 0.009 3.991 28 C -0.144 4.144 29 C -0.067 4.067 30 H 0.133 0.867 31 H 0.135 0.865 32 H 0.133 0.867 33 H 0.078 0.922 34 H 0.100 0.900 35 H 0.400 0.600 36 H 0.128 0.872 37 H 0.128 0.872 38 H 0.421 0.579 39 H 0.176 0.824 40 H 0.116 0.884 41 H 0.373 0.627 42 H -0.260 1.260 43 H -0.255 1.255 44 H 0.139 0.861 45 H 0.097 0.903 46 H 0.077 0.923 47 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.435 2.247 3.747 4.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.088 5.088 2 C -0.065 4.065 3 C -0.029 4.029 4 C -0.095 4.095 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.071 4.071 8 C -0.094 4.094 9 H 0.118 0.882 10 C -0.174 4.174 11 C 0.015 3.985 12 H 0.125 0.875 13 N -0.364 5.364 14 C 0.357 3.643 15 O -0.412 6.412 16 C -0.174 4.174 17 C -0.086 4.086 18 C -0.154 4.154 19 C 0.010 3.990 20 N -0.187 5.187 21 C -0.068 4.068 22 C -0.195 4.195 23 C -0.153 4.153 24 O -0.334 6.334 25 Si 0.587 3.413 26 C -0.107 4.107 27 C -0.011 4.011 28 C -0.183 4.183 29 C -0.088 4.088 30 H 0.151 0.849 31 H 0.153 0.847 32 H 0.150 0.850 33 H 0.097 0.903 34 H 0.119 0.881 35 H 0.235 0.765 36 H 0.145 0.855 37 H 0.145 0.855 38 H 0.259 0.741 39 H 0.193 0.807 40 H 0.134 0.866 41 H 0.220 0.780 42 H -0.185 1.185 43 H -0.180 1.180 44 H 0.157 0.843 45 H 0.115 0.885 46 H 0.096 0.904 47 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.777 2.582 3.462 4.388 hybrid contribution -0.498 -1.044 0.989 1.522 sum -1.274 1.537 4.451 4.878 Atomic orbital electron populations 1.81305 1.12081 1.08251 1.07161 1.25748 0.92706 0.93987 0.94058 1.15987 0.84279 1.05902 0.96735 1.21238 0.94529 0.96931 0.96762 1.21132 0.93569 0.99754 0.98854 1.21318 1.00707 0.96137 0.92365 1.19604 0.92712 0.99138 0.95656 1.21641 0.95152 0.97684 0.94898 0.88169 1.23448 0.95585 0.96469 1.01892 1.21828 1.00781 0.92772 0.83138 0.87455 1.45555 1.12930 1.55532 1.22414 1.18169 0.83660 0.77946 0.84542 1.90800 1.26728 1.60245 1.63382 1.19523 0.94893 1.06208 0.96750 1.20574 0.96159 0.97708 0.94180 1.19662 0.96926 1.01839 0.97006 1.18444 0.95864 0.96877 0.87798 1.41744 1.10807 1.46670 1.19471 1.21758 0.83609 1.01328 1.00094 1.20700 0.96230 1.06238 0.96301 1.24364 0.87117 0.94753 1.09024 1.86640 1.70064 1.42038 1.34656 0.95188 0.83776 0.84786 0.77540 1.18913 0.92503 1.03120 0.96130 1.20707 0.98299 0.90384 0.91666 1.23592 0.94905 1.00552 0.99221 1.21075 0.93666 0.97262 0.96793 0.84934 0.84684 0.84959 0.90330 0.88139 0.76458 0.85458 0.85453 0.74114 0.80702 0.86566 0.77953 1.18499 1.17975 0.84294 0.88474 0.90441 0.85052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.02 18.54 41.83 0.78 -1.24 16 2 C 0.25 0.50 15.33 -22.47 -0.34 0.16 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.13 9.76 -39.17 -0.38 -0.25 16 5 C -0.12 0.32 10.03 -39.64 -0.40 -0.07 16 6 C -0.09 0.25 8.60 -39.49 -0.34 -0.08 16 7 C -0.07 0.18 5.28 -104.68 -0.55 -0.37 16 8 C -0.08 0.26 3.85 -90.96 -0.35 -0.09 16 9 H 0.10 -0.43 8.09 -51.93 -0.42 -0.85 16 10 C -0.14 0.47 7.29 -25.92 -0.19 0.28 16 11 C 0.12 -0.18 4.32 -67.12 -0.29 -0.47 16 12 H 0.11 0.04 7.47 -51.93 -0.39 -0.35 16 13 N -0.71 0.76 5.21 -54.02 -0.28 0.47 16 14 C 0.57 1.38 7.76 -12.41 -0.10 1.29 16 15 O -0.53 -3.40 15.93 5.30 0.08 -3.32 16 16 C -0.17 -0.26 5.87 -104.97 -0.62 -0.87 16 17 C -0.07 0.07 9.46 -39.54 -0.37 -0.30 16 18 C -0.13 0.16 10.00 -39.86 -0.40 -0.24 16 19 C 0.12 0.00 7.27 -83.95 -0.61 -0.61 16 20 N -0.58 1.35 6.05 -10.61 -0.06 1.29 16 21 C 0.06 -0.12 10.43 -16.73 -0.17 -0.29 16 22 C -0.19 -0.03 5.58 -102.69 -0.57 -0.60 16 23 C -0.04 0.00 3.06 36.00 0.11 0.11 16 24 O -0.53 -0.97 12.88 -35.23 -0.45 -1.42 16 25 Si 0.69 -1.18 30.82 -169.99 -5.24 -6.41 16 26 C -0.10 -0.18 6.34 -105.16 -0.67 -0.84 16 27 C 0.01 0.02 9.64 -38.86 -0.37 -0.35 16 28 C -0.14 0.35 7.25 -25.92 -0.19 0.17 16 29 C -0.07 0.12 9.41 -39.17 -0.37 -0.25 16 30 H 0.13 -0.38 8.06 -52.48 -0.42 -0.81 16 31 H 0.14 -0.61 8.06 -52.49 -0.42 -1.04 16 32 H 0.13 -0.58 6.64 -52.49 -0.35 -0.93 16 33 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.10 -0.38 7.72 -51.93 -0.40 -0.78 16 35 H 0.40 -1.47 6.70 -40.82 -0.27 -1.74 16 36 H 0.13 -0.53 6.36 -52.49 -0.33 -0.86 16 37 H 0.13 -0.46 8.06 -52.49 -0.42 -0.88 16 38 H 0.42 -2.22 8.96 -40.82 -0.37 -2.59 16 39 H 0.18 -0.82 6.27 -52.48 -0.33 -1.15 16 40 H 0.12 0.01 7.96 -51.92 -0.41 -0.41 16 41 H 0.37 -0.48 8.70 45.56 0.40 -0.08 16 42 H -0.26 0.16 7.00 56.52 0.40 0.56 16 43 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 44 H 0.14 0.53 7.64 -52.48 -0.40 0.13 16 45 H 0.10 -0.30 6.30 -51.93 -0.33 -0.63 16 46 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 47 H 0.13 -0.39 8.05 -52.48 -0.42 -0.81 16 LS Contribution 403.16 15.07 6.08 6.08 Total: 0.00 -11.19 403.16 -12.24 -23.43 By element: Atomic # 1 Polarization: -9.24 SS G_CDS: -5.35 Total: -14.59 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: -7.79 Total: -4.29 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: 0.43 Total: 0.52 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -0.37 Total: -4.74 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.24 Total: -6.41 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -11.19 -12.24 -23.43 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13287722.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.984 kcal (2) G-P(sol) polarization free energy of solvation -11.190 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.240 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.430 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds