Wall clock time and date at job start Tue Mar 9 2021 12:52:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39615 * 120.15114 * 68.35083 * 3 2 1 5 5 C 1.37970 * 119.84533 * 179.74598 * 4 3 2 6 6 C 1.38338 * 120.15003 * 0.48986 * 5 4 3 7 7 C 1.38387 * 120.30572 * 359.48407 * 6 5 4 8 8 C 1.50700 * 119.92418 * 180.25855 * 7 6 5 9 9 H 1.09001 * 112.85052 * 168.80048 * 8 7 6 10 10 C 1.53782 * 113.61431 * 300.00142 * 8 7 6 11 11 C 1.53778 * 87.08020 * 139.98123 * 10 8 7 12 12 H 1.08996 * 113.61469 * 220.01961 * 11 10 8 13 13 N 1.46502 * 113.61587 * 89.11352 * 11 10 8 14 14 C 1.34780 * 119.99732 * 154.99691 * 13 11 10 15 15 O 1.21570 * 120.00118 * 0.02562 * 14 13 11 16 16 C 1.47658 * 119.99571 * 180.02562 * 14 13 11 17 17 C 1.40174 * 119.97524 * 0.02562 * 16 14 13 18 18 C 1.36348 * 120.66493 * 179.97438 * 17 16 14 19 19 C 1.39321 * 120.23955 * 359.97186 * 18 17 16 20 20 N 1.37410 * 133.25024 * 180.02562 * 19 18 17 21 21 C 1.36859 * 109.98040 * 180.02562 * 20 19 18 22 22 C 1.34188 * 109.96979 * 359.97438 * 21 20 19 23 23 C 1.50698 * 126.53954 * 180.02562 * 22 21 20 24 24 O 1.42893 * 109.47159 * 104.96240 * 23 22 21 25 25 Si 1.86294 * 109.47251 * 344.95748 * 23 22 21 26 26 C 1.40905 * 119.64695 * 0.02562 * 19 18 17 27 27 C 1.39190 * 119.97302 * 179.72525 * 16 14 13 28 28 C 1.53782 * 87.08329 * 334.56581 * 11 10 8 29 29 C 1.37927 * 120.15064 * 0.28085 * 7 6 5 30 30 H 1.08003 * 120.07596 * 359.97438 * 4 3 2 31 31 H 1.08000 * 119.92180 * 180.24933 * 5 4 3 32 32 H 1.08002 * 119.84938 * 179.76937 * 6 5 4 33 33 H 1.09007 * 113.61163 * 254.52844 * 10 8 7 34 34 H 1.08997 * 113.61321 * 25.34957 * 10 8 7 35 35 H 0.96998 * 119.99860 * 335.00555 * 13 11 10 36 36 H 1.07998 * 119.65922 * 359.94730 * 17 16 14 37 37 H 1.08002 * 119.87565 * 179.97438 * 18 17 16 38 38 H 0.96999 * 125.00549 * 359.95722 * 20 19 18 39 39 H 1.08004 * 125.01451 * 180.02562 * 21 20 19 40 40 H 1.09008 * 109.47042 * 224.95625 * 23 22 21 41 41 H 0.96696 * 114.00013 * 299.99530 * 24 23 22 42 42 H 1.48497 * 109.99997 * 58.68229 * 25 23 22 43 43 H 1.48508 * 109.99892 * 180.02562 * 25 23 22 44 44 H 1.08008 * 120.29880 * 359.97438 * 27 16 14 45 45 H 1.08999 * 113.61739 * 270.88504 * 28 11 10 46 46 H 1.09001 * 113.61328 * 139.98021 * 28 11 10 47 47 H 1.08005 * 120.07543 * 179.97438 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2694 -0.4444 -1.1221 5 6 4.6491 -0.4362 -1.1172 6 6 5.3374 0.0022 -0.0002 7 6 4.6484 0.4452 1.1153 8 6 5.4069 0.9264 2.3253 9 1 4.7684 1.4257 3.0542 10 6 6.3262 -0.1416 2.9410 11 6 7.3569 0.9800 3.1520 12 1 8.3825 0.6752 2.9442 13 7 7.2166 1.6721 4.4356 14 6 8.2794 2.2907 4.9873 15 8 9.3542 2.2748 4.4195 16 6 8.1381 2.9877 6.2813 17 6 6.8986 3.0052 6.9357 18 6 6.7524 3.6442 8.1313 19 6 7.8382 4.2894 8.7194 20 7 7.9931 4.9978 9.8866 21 6 9.2854 5.4335 10.0012 22 6 10.0000 5.0331 8.9383 23 6 11.4600 5.3063 8.6841 24 8 12.2165 4.1190 8.9291 25 14 12.0453 6.6612 9.8210 26 6 9.0895 4.2791 8.0717 27 6 9.2373 3.6216 6.8534 28 6 6.6826 1.7128 1.9802 29 6 3.2692 0.4469 1.1222 30 1 2.7333 -0.7909 -1.9933 31 1 5.1929 -0.7764 -1.9861 32 1 6.4174 0.0031 -0.0002 33 1 5.9438 -0.5637 3.8704 34 1 6.6472 -0.9034 2.2306 35 1 6.3589 1.6849 4.8885 36 1 6.0509 2.5080 6.4880 37 1 5.7915 3.6500 8.6242 38 1 7.2899 5.1652 10.5334 39 1 9.6732 6.0132 10.8258 40 1 11.5967 5.6169 7.6482 41 1 12.1420 3.7847 9.8333 42 1 11.8350 6.2630 11.2360 43 1 13.4838 6.9405 9.5798 44 1 10.1955 3.6061 6.3552 45 1 7.1022 1.4587 1.0068 46 1 6.5879 2.7877 2.1339 47 1 2.7327 0.7925 1.9936 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_13287722.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:26 Heat of formation + Delta-G solvation = 81.099202 kcal Electronic energy + Delta-G solvation = -31237.822670 eV Core-core repulsion = 26932.486019 eV Total energy + Delta-G solvation = -4305.336651 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.142 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.45337 -41.57127 -40.50512 -39.09893 -38.02341 -37.50080 -37.37549 -34.64099 -33.26913 -32.22077 -32.06476 -30.75952 -30.34022 -26.62786 -26.50010 -26.38481 -25.08269 -24.41739 -23.46417 -22.76828 -21.73723 -20.81346 -20.67015 -19.36584 -18.95297 -18.44087 -17.58859 -17.29919 -17.26416 -16.96060 -16.59426 -16.26944 -16.05108 -15.77942 -15.69315 -15.58810 -15.17519 -15.10577 -14.96382 -14.78556 -14.73640 -14.48051 -14.15333 -14.09311 -13.98329 -13.78582 -13.71701 -13.54441 -13.38941 -12.98025 -12.76379 -12.58551 -12.50223 -12.46797 -12.12445 -11.78826 -11.73370 -11.64475 -11.18075 -11.06100 -10.79206 -10.47222 -10.10261 -9.89159 -9.64208 -9.31152 -8.80125 -4.86099 -0.17377 -0.13607 0.22308 0.39576 1.36167 1.52731 1.57713 1.62174 1.85529 1.92441 2.02272 2.09954 2.14357 2.84063 2.87305 2.90560 3.52321 3.53168 3.63685 3.72881 3.74128 3.81252 3.86356 3.92223 3.96159 4.04264 4.15337 4.20951 4.22531 4.34783 4.38895 4.47810 4.53009 4.56558 4.61946 4.72838 4.80324 4.82015 4.86327 4.93808 5.02402 5.03874 5.08573 5.11617 5.22605 5.28869 5.36501 5.37082 5.44426 5.49329 5.57047 5.59458 5.71850 5.91490 6.00104 6.41079 6.53734 6.56628 6.62622 7.22186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.277 3.723 3 C -0.046 4.046 4 C -0.076 4.076 5 C -0.117 4.117 6 C -0.084 4.084 7 C -0.074 4.074 8 C -0.065 4.065 9 H 0.114 0.886 10 C -0.124 4.124 11 C 0.109 3.891 12 H 0.083 0.917 13 N -0.694 5.694 14 C 0.563 3.437 15 O -0.587 6.587 16 C -0.179 4.179 17 C -0.066 4.066 18 C -0.126 4.126 19 C 0.111 3.889 20 N -0.572 5.572 21 C 0.080 3.920 22 C -0.217 4.217 23 C -0.062 4.062 24 O -0.557 6.557 25 Si 0.786 3.214 26 C -0.127 4.127 27 C -0.022 4.022 28 C -0.142 4.142 29 C -0.066 4.066 30 H 0.140 0.860 31 H 0.154 0.846 32 H 0.148 0.852 33 H 0.087 0.913 34 H 0.107 0.893 35 H 0.415 0.585 36 H 0.161 0.839 37 H 0.161 0.839 38 H 0.438 0.562 39 H 0.208 0.792 40 H 0.100 0.900 41 H 0.384 0.616 42 H -0.260 1.260 43 H -0.311 1.311 44 H 0.107 0.893 45 H 0.104 0.896 46 H 0.066 0.934 47 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.098 2.494 5.425 6.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.037 4.037 3 C -0.049 4.049 4 C -0.097 4.097 5 C -0.135 4.135 6 C -0.102 4.102 7 C -0.074 4.074 8 C -0.083 4.083 9 H 0.132 0.868 10 C -0.162 4.162 11 C 0.003 3.997 12 H 0.101 0.899 13 N -0.346 5.346 14 C 0.353 3.647 15 O -0.469 6.469 16 C -0.183 4.183 17 C -0.086 4.086 18 C -0.146 4.146 19 C 0.001 3.999 20 N -0.175 5.175 21 C -0.047 4.047 22 C -0.224 4.224 23 C -0.170 4.170 24 O -0.365 6.365 25 Si 0.689 3.311 26 C -0.132 4.132 27 C -0.041 4.041 28 C -0.180 4.180 29 C -0.087 4.087 30 H 0.157 0.843 31 H 0.172 0.828 32 H 0.165 0.835 33 H 0.106 0.894 34 H 0.125 0.875 35 H 0.254 0.746 36 H 0.179 0.821 37 H 0.178 0.822 38 H 0.280 0.720 39 H 0.225 0.775 40 H 0.118 0.882 41 H 0.233 0.767 42 H -0.185 1.185 43 H -0.239 1.239 44 H 0.125 0.875 45 H 0.122 0.878 46 H 0.085 0.915 47 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -2.536 2.802 5.152 6.389 hybrid contribution 0.142 -1.140 0.419 1.223 sum -2.395 1.662 5.571 6.287 Atomic orbital electron populations 1.81314 1.13783 1.10703 1.09178 1.26151 0.93072 0.92203 0.92303 1.16098 0.82879 1.07965 0.98007 1.21407 0.95131 0.96522 0.96614 1.21371 0.93155 0.99383 0.99596 1.21595 1.01614 0.94957 0.92084 1.19677 0.92403 0.99211 0.96088 1.21605 0.94635 0.97214 0.94815 0.86770 1.23407 0.94329 0.95952 1.02478 1.21926 1.00275 0.94212 0.83255 0.89872 1.45421 1.12682 1.54114 1.22379 1.18450 0.83592 0.77876 0.84813 1.90765 1.28850 1.62416 1.64827 1.19586 0.95856 1.06287 0.96561 1.20884 0.95759 0.97670 0.94239 1.20063 0.97767 1.00231 0.96578 1.18646 0.95498 0.97281 0.88458 1.41770 1.11211 1.45574 1.18969 1.22164 0.83288 0.99686 0.99592 1.20759 0.96249 1.07936 0.97444 1.24751 0.87662 0.95207 1.09355 1.86596 1.70652 1.43369 1.35892 0.94098 0.79504 0.82087 0.75419 1.19175 0.94263 1.03587 0.96140 1.20608 0.97773 0.92796 0.92973 1.23587 0.95483 0.99927 0.99045 1.21210 0.94037 0.96719 0.96706 0.84261 0.82831 0.83453 0.89398 0.87459 0.74639 0.82117 0.82177 0.72045 0.77523 0.88169 0.76713 1.18502 1.23908 0.87461 0.87806 0.91501 0.84014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.22 18.54 19.00 0.35 -4.86 16 2 C 0.28 1.28 15.33 88.33 1.35 2.63 16 3 C -0.05 0.07 5.73 -21.36 -0.12 -0.05 16 4 C -0.08 0.33 9.76 22.54 0.22 0.55 16 5 C -0.12 0.82 10.03 22.23 0.22 1.05 16 6 C -0.08 0.63 8.60 22.33 0.19 0.82 16 7 C -0.07 0.49 5.28 -19.90 -0.11 0.39 16 8 C -0.06 0.55 3.85 -11.01 -0.04 0.51 16 9 H 0.11 -1.26 8.09 -2.39 -0.02 -1.28 16 10 C -0.12 1.00 7.29 31.12 0.23 1.23 16 11 C 0.11 -0.28 4.32 45.52 0.20 -0.09 16 12 H 0.08 0.23 7.47 -2.39 -0.02 0.21 16 13 N -0.69 1.20 5.21 -443.09 -2.31 -1.11 16 14 C 0.56 4.00 7.76 86.73 0.67 4.68 16 15 O -0.59 -9.81 15.93 -3.93 -0.06 -9.87 16 16 C -0.18 -0.86 5.87 -20.09 -0.12 -0.98 16 17 C -0.07 0.20 9.46 22.30 0.21 0.41 16 18 C -0.13 0.54 10.00 22.09 0.22 0.76 16 19 C 0.11 -0.08 7.27 39.18 0.28 0.20 16 20 N -0.57 3.76 6.05 -187.49 -1.13 2.62 16 21 C 0.08 -0.44 10.43 82.98 0.87 0.42 16 22 C -0.22 -0.26 5.58 -18.61 -0.10 -0.36 16 23 C -0.06 -0.13 3.06 71.24 0.22 0.09 16 24 O -0.56 -3.55 12.88 -148.98 -1.92 -5.47 16 25 Si 0.79 -2.62 30.82 68.60 2.11 -0.50 16 26 C -0.13 -0.65 6.34 -20.21 -0.13 -0.77 16 27 C -0.02 -0.19 9.64 22.74 0.22 0.03 16 28 C -0.14 0.73 7.25 31.12 0.23 0.96 16 29 C -0.07 0.31 9.41 22.54 0.21 0.52 16 30 H 0.14 -0.86 8.06 -2.91 -0.02 -0.88 16 31 H 0.15 -1.68 8.06 -2.91 -0.02 -1.70 16 32 H 0.15 -1.56 6.64 -2.91 -0.02 -1.58 16 33 H 0.09 -0.82 8.14 -2.38 -0.02 -0.84 16 34 H 0.11 -0.97 7.72 -2.39 -0.02 -0.99 16 35 H 0.41 -3.53 6.70 -92.71 -0.62 -4.16 16 36 H 0.16 -1.74 6.36 -2.91 -0.02 -1.76 16 37 H 0.16 -1.75 8.06 -2.91 -0.02 -1.77 16 38 H 0.44 -5.92 8.96 -92.71 -0.83 -6.75 16 39 H 0.21 -2.58 6.27 -2.91 -0.02 -2.59 16 40 H 0.10 0.40 7.96 -2.38 -0.02 0.38 16 41 H 0.38 -0.28 8.70 -74.06 -0.64 -0.93 16 42 H -0.26 0.86 7.00 99.48 0.70 1.55 16 43 H -0.31 -1.84 7.11 99.48 0.71 -1.13 16 44 H 0.11 1.48 7.64 -2.91 -0.02 1.46 16 45 H 0.10 -0.69 6.30 -2.39 -0.02 -0.70 16 46 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 47 H 0.14 -1.03 8.05 -2.91 -0.02 -1.05 16 Total: 0.00 -31.89 403.16 0.97 -30.92 By element: Atomic # 1 Polarization: -23.71 SS G_CDS: -0.99 Total: -24.71 kcal Atomic # 6 Polarization: 8.06 SS G_CDS: 4.92 Total: 12.98 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -3.09 Total: -3.35 kcal Atomic # 8 Polarization: -13.35 SS G_CDS: -1.98 Total: -15.34 kcal Atomic # 14 Polarization: -2.62 SS G_CDS: 2.11 Total: -0.50 kcal Total: -31.89 0.97 -30.92 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13287722.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 112.016 kcal (2) G-P(sol) polarization free energy of solvation -31.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.129 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.971 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.917 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.099 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds