Wall clock time and date at job start Tue Mar 9 2021 12:52:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39620 * 120.15000 * 302.31776 * 3 2 1 5 5 C 1.37969 * 119.84316 * 179.97438 * 4 3 2 6 6 C 1.38339 * 120.15112 * 359.74094 * 5 4 3 7 7 C 1.38380 * 120.30819 * 0.51095 * 6 5 4 8 8 C 1.50700 * 119.92824 * 179.76408 * 7 6 5 9 9 H 1.08993 * 112.91004 * 190.97605 * 8 7 6 10 10 C 1.53962 * 113.66521 * 322.28015 * 8 7 6 11 11 C 1.53782 * 87.11063 * 139.88647 * 10 8 7 12 12 H 1.09004 * 113.68975 * 220.07786 * 11 10 8 13 13 N 1.46501 * 113.61142 * 89.18830 * 11 10 8 14 14 C 1.34769 * 120.00014 * 107.50467 * 13 11 10 15 15 O 1.21519 * 120.00223 * 359.97438 * 14 13 11 16 16 C 1.48167 * 120.00110 * 179.97438 * 14 13 11 17 17 N 1.32710 * 119.72343 * 359.71737 * 16 14 13 18 18 C 1.31531 * 121.64905 * 179.75230 * 17 16 14 19 19 C 1.38562 * 120.89466 * 0.53467 * 18 17 16 20 20 C 1.50703 * 120.32230 * 179.71996 * 19 18 17 21 21 O 1.42903 * 109.46894 * 245.02027 * 20 19 18 22 22 Si 1.86302 * 109.46779 * 5.01834 * 20 19 18 23 23 C 1.38625 * 119.35269 * 359.73511 * 19 18 17 24 24 C 1.38580 * 118.49292 * 0.02562 * 23 19 18 25 25 C 1.53781 * 87.08260 * 334.63747 * 11 10 8 26 26 C 1.37929 * 120.15172 * 359.49186 * 7 6 5 27 27 H 1.07995 * 120.07830 * 359.97438 * 4 3 2 28 28 H 1.07997 * 119.92109 * 179.97438 * 5 4 3 29 29 H 1.08008 * 119.84687 * 180.27774 * 6 5 4 30 30 H 1.08997 * 113.53543 * 25.33321 * 10 8 7 31 31 H 1.08998 * 113.73879 * 254.46919 * 10 8 7 32 32 H 0.97001 * 119.99973 * 287.49325 * 13 11 10 33 33 H 1.07994 * 119.55419 * 180.27224 * 18 17 16 34 34 H 1.08997 * 109.47110 * 125.01549 * 20 19 18 35 35 H 0.96701 * 114.00067 * 60.00005 * 21 20 19 36 36 H 1.48498 * 109.99830 * 180.02562 * 22 20 19 37 37 H 1.48502 * 109.99894 * 301.31782 * 22 20 19 38 38 H 1.08006 * 120.75334 * 179.97438 * 23 19 18 39 39 H 1.08005 * 120.47286 * 180.02562 * 24 23 19 40 40 H 1.09002 * 113.61445 * 139.98212 * 25 11 10 41 41 H 1.09002 * 113.61408 * 270.79943 * 25 11 10 42 42 H 1.07998 * 120.07696 * 180.27445 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2696 -0.6445 1.0203 5 6 4.6492 -0.6404 1.0138 6 6 5.3374 -0.0036 -0.0035 7 6 4.6484 0.6422 -1.0150 8 6 5.4068 1.3377 -2.1160 9 1 4.7693 1.9637 -2.7403 10 6 6.6852 2.0469 -1.6334 11 6 7.3587 1.5400 -2.9196 12 1 8.3838 1.1999 -2.7725 13 7 7.2205 2.4560 -4.0545 14 6 8.2847 3.1631 -4.4833 15 8 9.3588 3.0411 -3.9282 16 6 8.1451 4.0891 -5.6314 17 7 6.9709 4.2138 -6.2372 18 6 6.8032 5.0280 -7.2565 19 6 7.8575 5.7826 -7.7453 20 6 7.6524 6.7068 -8.9179 21 8 8.4279 6.2481 -10.0271 22 14 5.8493 6.7251 -9.3860 23 6 9.1029 5.6790 -7.1453 24 6 9.2490 4.8169 -6.0701 25 6 6.3256 0.4008 -2.9180 26 6 3.2692 0.6460 -1.0209 27 1 2.7335 -1.1455 1.8127 28 1 5.1932 -1.1386 1.8026 29 1 6.4175 -0.0073 -0.0061 30 1 7.1038 1.6177 -0.7231 31 1 6.5941 3.1320 -1.5867 32 1 6.3630 2.5535 -4.4975 33 1 5.8316 5.1063 -7.7215 34 1 7.9674 7.7142 -8.6460 35 1 8.2010 5.3561 -10.3237 36 1 5.6338 7.6323 -10.5417 37 1 5.3994 5.3518 -9.7282 38 1 9.9405 6.2563 -7.5081 39 1 10.2049 4.7116 -5.5785 40 1 5.9428 0.1571 -3.9091 41 1 6.6465 -0.4789 -2.3601 42 1 2.7327 1.1466 -1.8134 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_13287726.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:30 Heat of formation + Delta-G solvation = 58.827012 kcal Electronic energy + Delta-G solvation = -26489.133840 eV Core-core repulsion = 22594.821294 eV Total energy + Delta-G solvation = -3894.312546 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.126 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.04524 -41.44188 -40.28056 -39.04349 -38.08704 -37.29827 -34.83358 -33.75028 -33.03705 -32.38661 -31.97703 -28.09698 -26.86827 -26.31819 -25.14870 -24.97593 -23.95711 -22.95730 -22.09277 -20.79673 -19.37869 -19.07488 -18.75499 -17.82231 -17.48195 -17.06581 -16.77751 -16.61292 -16.47908 -16.31250 -16.12370 -15.82030 -15.40725 -15.12638 -14.99998 -14.71043 -14.54926 -14.46711 -14.27069 -14.14429 -13.98369 -13.70031 -13.60964 -13.55479 -13.06440 -12.95554 -12.75426 -12.66832 -12.18302 -11.96724 -11.84489 -11.42260 -11.32641 -11.14764 -10.82493 -10.69831 -10.41148 -10.12173 -10.05764 -9.82353 -5.13904 -0.63200 -0.29605 0.00149 0.18340 1.04908 1.40847 1.56447 1.70674 1.80515 1.89852 1.92013 2.63064 2.77829 2.84168 2.87477 3.13353 3.30324 3.37189 3.51700 3.53905 3.60600 3.66892 3.71873 3.80602 3.85661 3.94250 3.99197 4.07507 4.11911 4.29965 4.33150 4.48097 4.51759 4.57122 4.61415 4.68224 4.78880 4.81314 4.85666 4.89544 4.91126 5.00728 5.18492 5.22521 5.29578 5.37137 5.50759 5.69244 6.16490 6.26587 6.51516 6.56721 7.07807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.413 5.413 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.071 4.071 8 C -0.075 4.075 9 H 0.102 0.898 10 C -0.143 4.143 11 C 0.116 3.884 12 H 0.108 0.892 13 N -0.694 5.694 14 C 0.576 3.424 15 O -0.526 6.526 16 C 0.080 3.920 17 N -0.453 5.453 18 C 0.102 3.898 19 C -0.148 4.148 20 C -0.074 4.074 21 O -0.525 6.525 22 Si 0.686 3.314 23 C -0.052 4.052 24 C -0.107 4.107 25 C -0.135 4.135 26 C -0.067 4.067 27 H 0.133 0.867 28 H 0.135 0.865 29 H 0.132 0.868 30 H 0.098 0.902 31 H 0.077 0.923 32 H 0.413 0.587 33 H 0.165 0.835 34 H 0.125 0.875 35 H 0.378 0.622 36 H -0.251 1.251 37 H -0.255 1.255 38 H 0.148 0.852 39 H 0.153 0.847 40 H 0.079 0.921 41 H 0.101 0.899 42 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.055 0.829 -0.218 2.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.065 4.065 3 C -0.029 4.029 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.106 4.106 7 C -0.071 4.071 8 C -0.094 4.094 9 H 0.120 0.880 10 C -0.181 4.181 11 C 0.011 3.989 12 H 0.126 0.874 13 N -0.345 5.345 14 C 0.361 3.639 15 O -0.401 6.401 16 C -0.058 4.058 17 N -0.164 5.164 18 C -0.058 4.058 19 C -0.150 4.150 20 C -0.184 4.184 21 O -0.332 6.332 22 Si 0.587 3.413 23 C -0.078 4.078 24 C -0.128 4.128 25 C -0.173 4.173 26 C -0.087 4.087 27 H 0.151 0.849 28 H 0.153 0.847 29 H 0.150 0.850 30 H 0.116 0.884 31 H 0.096 0.904 32 H 0.249 0.751 33 H 0.181 0.819 34 H 0.143 0.857 35 H 0.226 0.774 36 H -0.176 1.176 37 H -0.179 1.179 38 H 0.166 0.834 39 H 0.171 0.829 40 H 0.098 0.902 41 H 0.119 0.881 42 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 0.048 0.635 -0.039 0.638 hybrid contribution 1.284 -0.245 -1.064 1.685 sum 1.332 0.390 -1.103 1.773 Atomic orbital electron populations 1.81308 1.12071 1.08000 1.07361 1.25745 0.92703 0.94020 0.94061 1.15991 0.84295 1.03988 0.98590 1.21239 0.94526 0.96874 0.96809 1.21128 0.93576 0.99610 0.99023 1.21307 1.00665 0.95399 0.93192 1.19589 0.92733 0.98437 0.96355 1.21670 0.95159 0.97312 0.95222 0.87962 1.23612 0.94946 1.01611 0.97977 1.21918 1.00898 0.90144 0.85944 0.87365 1.45488 1.13262 1.42650 1.33102 1.17836 0.84077 0.79763 0.82212 1.90825 1.26822 1.65439 1.57033 1.21147 0.90302 0.97817 0.96511 1.67521 1.23768 1.17263 1.07867 1.22678 0.98608 0.91722 0.92752 1.21589 0.95199 0.99236 0.98974 1.25018 1.09079 0.99354 0.84978 1.86645 1.61088 1.37043 1.48392 0.94985 0.75942 0.82504 0.87900 1.21572 0.97305 0.95874 0.93073 1.22232 1.00275 0.94359 0.95951 1.23441 0.95451 0.97078 1.01344 1.21089 0.93670 0.97111 0.96853 0.84931 0.84694 0.84994 0.88380 0.90405 0.75076 0.81871 0.85703 0.77422 1.17581 1.17945 0.83439 0.82931 0.90193 0.88055 0.84980 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.01 18.54 41.84 0.78 -1.23 16 2 C 0.25 0.50 15.33 -22.47 -0.34 0.15 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.14 9.76 -39.16 -0.38 -0.24 16 5 C -0.12 0.34 10.03 -39.64 -0.40 -0.05 16 6 C -0.09 0.27 8.59 -39.49 -0.34 -0.07 16 7 C -0.07 0.19 5.29 -104.68 -0.55 -0.36 16 8 C -0.08 0.26 3.87 -90.86 -0.35 -0.09 16 9 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 10 C -0.14 0.40 7.26 -25.82 -0.19 0.21 16 11 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 12 H 0.11 -0.06 7.46 -51.93 -0.39 -0.45 16 13 N -0.69 0.60 5.25 -53.86 -0.28 0.32 16 14 C 0.58 0.99 7.81 -12.19 -0.10 0.90 16 15 O -0.53 -2.44 15.92 5.35 0.09 -2.36 16 16 C 0.08 0.07 6.75 -83.01 -0.56 -0.49 16 17 N -0.45 0.01 9.54 -9.80 -0.09 -0.09 16 18 C 0.10 -0.15 9.84 -17.56 -0.17 -0.32 16 19 C -0.15 0.26 5.37 -104.36 -0.56 -0.30 16 20 C -0.07 0.18 2.82 36.01 0.10 0.28 16 21 O -0.53 0.42 12.84 -35.23 -0.45 -0.03 16 22 Si 0.69 -2.07 29.91 -169.99 -5.08 -7.15 16 23 C -0.05 0.07 9.83 -39.31 -0.39 -0.32 16 24 C -0.11 0.00 9.63 -39.05 -0.38 -0.38 16 25 C -0.14 0.48 7.28 -25.92 -0.19 0.29 16 26 C -0.07 0.12 9.41 -39.17 -0.37 -0.25 16 27 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 28 H 0.14 -0.64 8.06 -52.49 -0.42 -1.06 16 29 H 0.13 -0.63 6.66 -52.48 -0.35 -0.97 16 30 H 0.10 -0.35 6.32 -51.93 -0.33 -0.68 16 31 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.41 -0.89 8.03 -40.82 -0.33 -1.22 16 33 H 0.16 -0.58 4.86 -52.49 -0.25 -0.84 16 34 H 0.13 -0.42 7.96 -51.93 -0.41 -0.83 16 35 H 0.38 -1.34 8.70 45.56 0.40 -0.94 16 36 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 37 H -0.25 0.33 7.01 56.52 0.40 0.73 16 38 H 0.15 -0.38 8.06 -52.48 -0.42 -0.80 16 39 H 0.15 -0.04 7.64 -52.48 -0.40 -0.44 16 40 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 41 H 0.10 -0.42 7.71 -51.93 -0.40 -0.82 16 42 H 0.13 -0.38 8.05 -52.49 -0.42 -0.80 16 LS Contribution 366.99 15.07 5.53 5.53 Total: 0.00 -8.72 366.99 -10.21 -18.93 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -4.63 Total: -11.76 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: -6.07 Total: -2.15 kcal Atomic # 7 Polarization: -1.41 SS G_CDS: 0.40 Total: -1.01 kcal Atomic # 8 Polarization: -2.02 SS G_CDS: -0.37 Total: -2.39 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: -5.08 Total: -7.15 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -8.72 -10.21 -18.93 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13287726.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.758 kcal (2) G-P(sol) polarization free energy of solvation -8.718 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.213 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.930 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds