Wall clock time and date at job start Tue Mar 9 2021 12:52:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46895 * 110.99627 * 2 1 4 4 C 1.39055 * 110.99714 * 123.94791 * 2 1 3 5 5 C 1.39199 * 119.92502 * 120.00354 * 4 2 1 6 6 C 1.50699 * 119.97048 * 0.02562 * 5 4 2 7 7 O 1.42898 * 109.47491 * 74.99554 * 6 5 4 8 8 Si 1.86297 * 109.46947 * 194.99879 * 6 5 4 9 9 C 1.37631 * 120.06272 * 179.97438 * 5 4 2 10 10 C 1.39778 * 119.93292 * 0.02562 * 9 5 4 11 11 C 1.47525 * 120.06841 * 180.02562 * 10 9 5 12 12 O 1.21588 * 119.99975 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99829 * 180.02562 * 11 10 9 14 14 C 1.46496 * 119.99986 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.85085 * 25.33515 * 14 13 11 16 16 C 1.53783 * 113.61551 * 156.52690 * 14 13 11 17 17 C 1.53781 * 87.07914 * 89.12017 * 16 14 13 18 18 H 1.09003 * 113.60876 * 270.88052 * 17 16 14 19 19 C 1.50694 * 113.61529 * 140.06864 * 17 16 14 20 20 C 1.37929 * 119.92671 * 119.99269 * 19 17 16 21 21 C 1.39653 * 119.84726 * 179.97438 * 20 19 17 22 22 C 1.43197 * 120.15115 * 180.02562 * 21 20 19 23 23 N 9.92423 * 108.41772 * 141.15860 * 11 1 2 24 24 C 1.39617 * 119.69833 * 0.02562 * 21 20 19 25 25 C 1.37963 * 119.84674 * 359.97438 * 24 21 20 26 26 C 1.38344 * 120.15029 * 359.75296 * 25 24 21 27 27 C 1.53780 * 113.61667 * 254.13823 * 14 13 11 28 28 C 1.39811 * 119.86266 * 359.97438 * 10 9 5 29 29 C 1.37594 * 119.93092 * 359.72115 * 28 10 9 30 30 H 1.08998 * 109.47478 * 296.04613 * 1 2 3 31 31 H 1.08994 * 109.47090 * 56.05316 * 1 2 3 32 32 H 1.09007 * 109.46737 * 176.04992 * 1 2 3 33 33 H 1.09001 * 109.46888 * 183.95520 * 3 2 1 34 34 H 1.09004 * 109.46957 * 303.94904 * 3 2 1 35 35 H 1.08994 * 109.48029 * 63.95048 * 3 2 1 36 36 H 1.09000 * 109.46565 * 314.99580 * 6 5 4 37 37 H 0.96698 * 113.99923 * 300.00329 * 7 6 5 38 38 H 1.48496 * 110.00066 * 298.67658 * 8 6 5 39 39 H 1.48506 * 110.00304 * 59.99772 * 8 6 5 40 40 H 1.08004 * 120.03141 * 179.97438 * 9 5 4 41 41 H 0.96997 * 119.99904 * 359.97438 * 13 11 10 42 42 H 1.08998 * 113.61682 * 203.66685 * 16 14 13 43 43 H 1.08999 * 113.61392 * 334.56776 * 16 14 13 44 44 H 1.08000 * 120.07394 * 0.02562 * 20 19 17 45 45 H 1.07995 * 120.07374 * 180.02562 * 24 21 20 46 46 H 1.07999 * 119.92779 * 179.97438 * 25 24 21 47 47 H 1.07998 * 119.84885 * 180.27202 * 26 25 24 48 48 H 1.08996 * 113.61589 * 25.42886 * 27 14 13 49 49 H 1.09004 * 113.61485 * 156.33563 * 27 14 13 50 50 H 1.08004 * 120.03653 * 180.02562 * 28 10 9 51 51 H 1.08000 * 119.96579 * 180.29160 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3714 0.0000 4 6 1.9673 -0.7250 1.0769 5 6 2.7793 -1.8330 0.8520 6 6 3.1176 -2.2446 -0.5577 7 8 4.0869 -1.3441 -1.0974 8 14 3.8123 -3.9732 -0.5499 9 6 3.2744 -2.5522 1.9158 10 6 2.9607 -2.1694 3.2230 11 6 3.4902 -2.9379 4.3655 12 8 4.2000 -3.9057 4.1706 13 7 3.1864 -2.5679 5.6254 14 6 3.7118 -3.3313 6.7599 15 1 4.6352 -3.8599 6.5232 16 6 3.7822 -2.5233 8.0665 17 6 2.3457 -2.9970 8.3445 18 1 1.5814 -2.3374 7.9336 19 6 2.0965 -3.3541 9.7872 20 6 1.1319 -2.6795 10.5063 21 6 0.9019 -3.0122 11.8429 22 6 -0.0982 -2.3165 12.5954 23 7 -0.8883 -1.7609 13.1935 24 6 1.6515 -4.0262 12.4422 25 6 2.6131 -4.6928 11.7112 26 6 2.8319 -4.3619 10.3859 27 6 2.6575 -4.2123 7.4508 28 6 2.1448 -1.0561 3.4455 29 6 1.6580 -0.3373 2.3780 30 1 -0.3634 0.4512 0.9233 31 1 -0.3633 0.5738 -0.8525 32 1 -0.3633 -1.0253 -0.0708 33 1 3.0827 1.3432 -0.0709 34 1 1.5897 1.9163 -0.8525 35 1 1.7043 1.8724 0.9232 36 1 2.2162 -2.2180 -1.1700 37 1 3.7924 -0.4237 -1.1318 38 1 5.0590 -4.0159 0.2556 39 1 2.8137 -4.9196 0.0091 40 1 3.9041 -3.4121 1.7407 41 1 2.6198 -1.7961 5.7808 42 1 4.5136 -2.9065 8.7780 43 1 3.8649 -1.4477 7.9108 44 1 0.5554 -1.8964 10.0364 45 1 1.4784 -4.2887 13.4754 46 1 3.1940 -5.4771 12.1736 47 1 3.5828 -4.8899 9.8169 48 1 1.8329 -4.4993 6.7983 49 1 3.0822 -5.0564 7.9943 50 1 1.9009 -0.7576 4.4544 51 1 1.0316 0.5256 2.5494 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_13422196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:58 Heat of formation + Delta-G solvation = 64.092826 kcal Electronic energy + Delta-G solvation = -33067.716976 eV Core-core repulsion = 28707.019916 eV Total energy + Delta-G solvation = -4360.697060 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.173 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.00191 -41.33794 -40.42259 -39.11511 -37.71239 -37.49529 -37.34749 -34.87989 -32.93512 -32.26151 -32.05545 -31.19016 -28.58227 -26.95805 -26.87434 -26.71064 -25.71517 -24.83254 -23.49900 -23.07878 -22.79173 -21.37770 -20.82613 -19.21755 -19.02961 -18.06734 -17.91609 -17.43874 -17.31701 -16.86265 -16.52493 -16.43024 -16.19406 -16.01334 -15.82660 -15.72676 -15.37159 -15.18730 -15.07848 -14.89266 -14.74288 -14.44988 -14.19730 -14.11270 -14.05986 -13.88929 -13.81424 -13.59819 -13.45214 -13.17853 -13.10376 -12.97176 -12.82798 -12.74352 -12.66000 -12.51962 -12.34509 -11.81350 -11.73126 -11.44085 -11.30211 -11.25969 -11.00798 -10.31011 -10.22547 -9.93669 -9.87909 -9.68810 -9.64559 -4.91988 -0.52844 -0.21405 0.01646 0.35110 1.31565 1.49911 1.54312 1.58855 1.88297 1.89417 1.92911 2.49405 2.68130 2.80455 2.83189 3.40241 3.45657 3.49295 3.56512 3.66869 3.71566 3.84539 3.90064 3.96512 3.97911 4.04601 4.11611 4.15113 4.17267 4.29785 4.35766 4.38303 4.42835 4.49044 4.57294 4.59176 4.60969 4.69728 4.74935 4.79100 4.83552 4.90796 4.96887 4.98113 4.98218 5.01331 5.02528 5.03809 5.11767 5.13335 5.32541 5.38262 5.41223 5.47224 5.63647 5.75658 5.87218 6.14684 6.33114 6.37719 6.65549 7.00245 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.523 5.523 3 C 0.022 3.978 4 C 0.132 3.868 5 C -0.113 4.113 6 C -0.064 4.064 7 O -0.544 6.544 8 Si 0.794 3.206 9 C -0.081 4.081 10 C -0.149 4.149 11 C 0.559 3.441 12 O -0.582 6.582 13 N -0.690 5.690 14 C 0.107 3.893 15 H 0.085 0.915 16 C -0.122 4.122 17 C -0.065 4.065 18 H 0.113 0.887 19 C -0.075 4.075 20 C -0.066 4.066 21 C -0.046 4.046 22 C 0.276 3.724 23 N -0.473 5.473 24 C -0.076 4.076 25 C -0.117 4.117 26 C -0.084 4.084 27 C -0.142 4.142 28 C -0.057 4.057 29 C -0.149 4.149 30 H 0.044 0.956 31 H 0.091 0.909 32 H 0.065 0.935 33 H 0.070 0.930 34 H 0.092 0.908 35 H 0.042 0.958 36 H 0.096 0.904 37 H 0.374 0.626 38 H -0.300 1.300 39 H -0.274 1.274 40 H 0.112 0.888 41 H 0.416 0.584 42 H 0.109 0.891 43 H 0.089 0.911 44 H 0.142 0.858 45 H 0.140 0.860 46 H 0.155 0.845 47 H 0.148 0.852 48 H 0.065 0.935 49 H 0.105 0.895 50 H 0.166 0.834 51 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.021 3.318 -2.390 4.215 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.245 5.245 3 C -0.124 4.124 4 C 0.037 3.963 5 C -0.114 4.114 6 C -0.174 4.174 7 O -0.351 6.351 8 Si 0.699 3.301 9 C -0.100 4.100 10 C -0.152 4.152 11 C 0.347 3.653 12 O -0.463 6.463 13 N -0.342 5.342 14 C 0.002 3.998 15 H 0.103 0.897 16 C -0.160 4.160 17 C -0.083 4.083 18 H 0.131 0.869 19 C -0.075 4.075 20 C -0.087 4.087 21 C -0.049 4.049 22 C -0.038 4.038 23 N -0.149 5.149 24 C -0.096 4.096 25 C -0.135 4.135 26 C -0.102 4.102 27 C -0.181 4.181 28 C -0.076 4.076 29 C -0.169 4.169 30 H 0.062 0.938 31 H 0.109 0.891 32 H 0.084 0.916 33 H 0.089 0.911 34 H 0.111 0.889 35 H 0.061 0.939 36 H 0.114 0.886 37 H 0.223 0.777 38 H -0.229 1.229 39 H -0.201 1.201 40 H 0.129 0.871 41 H 0.255 0.745 42 H 0.128 0.872 43 H 0.108 0.892 44 H 0.159 0.841 45 H 0.158 0.842 46 H 0.172 0.828 47 H 0.166 0.834 48 H 0.084 0.916 49 H 0.124 0.876 50 H 0.183 0.817 51 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -1.060 2.093 -1.601 2.840 hybrid contribution -0.917 1.511 1.586 2.375 sum -1.977 3.604 -0.015 4.111 Atomic orbital electron populations 1.22550 0.84083 1.03024 1.02486 1.59452 1.09964 1.15278 1.39806 1.22609 1.01091 0.86065 1.02602 1.18942 0.94039 0.93080 0.90204 1.20330 0.98829 0.96179 0.96095 1.25049 0.97856 1.04407 0.90048 1.86687 1.41932 1.21809 1.84656 0.92819 0.76773 0.73074 0.87409 1.21065 0.97808 0.98647 0.92522 1.19896 1.03426 0.99359 0.92544 1.18389 0.79548 0.83373 0.83977 1.90792 1.39709 1.29761 1.86012 1.45431 1.52010 1.32729 1.03983 1.21990 0.97811 0.94575 0.85453 0.89692 1.23401 0.96516 1.01373 0.94680 1.21648 0.98261 0.98184 0.90186 0.86851 1.19654 0.95830 0.96279 0.95709 1.21203 0.97013 0.99071 0.91403 1.16096 0.96036 0.99254 0.93523 1.26152 0.92646 0.92448 0.92549 1.81323 1.12285 1.10947 1.10337 1.21414 0.94132 0.93191 1.00865 1.21378 0.97600 1.00244 0.94244 1.21593 0.98251 0.95444 0.94945 1.23637 0.98908 0.97525 0.97984 1.21477 0.93284 0.91699 1.01122 1.21919 1.01466 1.01387 0.92083 0.93778 0.89081 0.91631 0.91077 0.88892 0.93908 0.88606 0.77699 1.22883 1.20083 0.87086 0.74515 0.87243 0.89239 0.84066 0.84214 0.82776 0.83434 0.91605 0.87643 0.81692 0.82468 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.15 9.34 127.69 1.19 1.04 16 2 N -0.52 2.00 3.70 -745.11 -2.76 -0.76 16 3 C 0.02 -0.16 9.09 127.69 1.16 1.01 16 4 C 0.13 -0.05 4.66 38.47 0.18 0.13 16 5 C -0.11 -0.53 5.28 -19.78 -0.10 -0.64 16 6 C -0.06 -0.23 2.29 71.24 0.16 -0.07 16 7 O -0.54 -2.41 12.65 -148.98 -1.89 -4.30 16 8 Si 0.79 4.14 30.40 68.60 2.09 6.23 16 9 C -0.08 -0.71 8.20 22.50 0.18 -0.52 16 10 C -0.15 -0.65 5.88 -20.08 -0.12 -0.76 16 11 C 0.56 3.65 7.76 86.69 0.67 4.32 16 12 O -0.58 -9.47 15.95 -3.99 -0.06 -9.54 16 13 N -0.69 1.76 5.21 -443.21 -2.31 -0.55 16 14 C 0.11 -0.37 4.29 45.52 0.20 -0.17 16 15 H 0.08 0.14 7.50 -2.39 -0.02 0.13 16 16 C -0.12 1.10 7.29 31.12 0.23 1.32 16 17 C -0.06 0.59 3.86 -10.92 -0.04 0.55 16 18 H 0.11 -1.31 8.09 -2.39 -0.02 -1.33 16 19 C -0.07 0.53 5.28 -19.91 -0.11 0.43 16 20 C -0.07 0.33 9.41 22.54 0.21 0.55 16 21 C -0.05 0.09 5.73 -21.36 -0.12 -0.04 16 22 C 0.28 1.20 15.33 88.33 1.35 2.55 16 23 N -0.47 -5.10 18.54 19.00 0.35 -4.74 16 24 C -0.08 0.35 9.76 22.54 0.22 0.57 16 25 C -0.12 0.87 10.03 22.23 0.22 1.09 16 26 C -0.08 0.67 8.62 22.33 0.19 0.86 16 27 C -0.14 0.81 7.27 31.21 0.23 1.04 16 28 C -0.06 0.21 9.53 22.50 0.21 0.42 16 29 C -0.15 0.60 8.53 22.36 0.19 0.79 16 30 H 0.04 -0.35 7.11 -2.39 -0.02 -0.37 16 31 H 0.09 -0.76 8.12 -2.39 -0.02 -0.77 16 32 H 0.06 -0.30 8.14 -2.38 -0.02 -0.32 16 33 H 0.07 -0.44 7.41 -2.39 -0.02 -0.46 16 34 H 0.09 -0.85 8.12 -2.39 -0.02 -0.87 16 35 H 0.04 -0.35 7.30 -2.39 -0.02 -0.37 16 36 H 0.10 0.06 7.77 -2.39 -0.02 0.05 16 37 H 0.37 -0.10 7.48 -74.06 -0.55 -0.65 16 38 H -0.30 -4.09 6.81 99.48 0.68 -3.42 16 39 H -0.27 -2.46 7.11 99.48 0.71 -1.75 16 40 H 0.11 1.53 4.50 -2.91 -0.01 1.52 16 41 H 0.42 -3.97 6.72 -92.71 -0.62 -4.59 16 42 H 0.11 -1.09 7.73 -2.39 -0.02 -1.11 16 43 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 44 H 0.14 -1.07 8.05 -2.91 -0.02 -1.09 16 45 H 0.14 -0.91 8.06 -2.91 -0.02 -0.93 16 46 H 0.15 -1.75 8.06 -2.91 -0.02 -1.78 16 47 H 0.15 -1.65 6.63 -2.91 -0.02 -1.67 16 48 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 49 H 0.11 -0.75 6.31 -2.38 -0.02 -0.77 16 50 H 0.17 -1.94 6.39 -2.91 -0.02 -1.96 16 51 H 0.16 -1.43 6.99 -2.91 -0.02 -1.45 16 Total: 0.00 -25.86 420.57 1.56 -24.30 By element: Atomic # 1 Polarization: -24.93 SS G_CDS: -0.17 Total: -25.10 kcal Atomic # 6 Polarization: 8.15 SS G_CDS: 6.32 Total: 14.46 kcal Atomic # 7 Polarization: -1.33 SS G_CDS: -4.72 Total: -6.05 kcal Atomic # 8 Polarization: -11.89 SS G_CDS: -1.95 Total: -13.83 kcal Atomic # 14 Polarization: 4.14 SS G_CDS: 2.09 Total: 6.23 kcal Total: -25.86 1.56 -24.30 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13422196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.389 kcal (2) G-P(sol) polarization free energy of solvation -25.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.530 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.563 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.296 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds