Wall clock time and date at job start Tue Mar 9 2021 12:53:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13607 * 1 3 3 C 1.43190 * 179.97438 * 2 1 4 4 C 1.39617 * 120.14826 * 346.30140 * 3 2 1 5 5 C 1.37972 * 119.84482 * 179.97438 * 4 3 2 6 6 C 1.38340 * 120.14912 * 359.97438 * 5 4 3 7 7 C 1.38379 * 120.30978 * 0.02562 * 6 5 4 8 8 C 1.50699 * 119.92767 * 179.97438 * 7 6 5 9 9 H 1.09002 * 112.90791 * 191.25095 * 8 7 6 10 10 C 1.53779 * 113.61429 * 322.50423 * 8 7 6 11 11 C 1.53779 * 87.08402 * 139.98140 * 10 8 7 12 12 H 1.08997 * 113.61646 * 220.02209 * 11 10 8 13 13 N 1.46497 * 113.69123 * 89.12592 * 11 10 8 14 14 C 1.34780 * 119.99769 * 107.46801 * 13 11 10 15 15 O 1.21614 * 120.00268 * 0.02562 * 14 13 11 16 16 C 1.47380 * 119.99945 * 179.97438 * 14 13 11 17 17 C 1.36420 * 127.19066 * 359.68757 * 16 14 13 18 18 O 1.33647 * 108.39813 * 179.89142 * 17 16 14 19 19 C 1.34215 * 110.90509 * 0.38591 * 18 17 16 20 20 C 1.50707 * 125.43705 * 179.75884 * 19 18 17 21 21 O 1.42902 * 109.46827 * 120.00054 * 20 19 18 22 22 Si 1.86301 * 109.47120 * 0.02562 * 20 19 18 23 23 C 1.34177 * 109.12587 * 359.76224 * 19 18 17 24 24 C 1.53784 * 113.61308 * 59.99997 * 8 7 6 25 25 C 1.37929 * 120.14985 * 0.25757 * 7 6 5 26 26 H 1.07993 * 120.07944 * 0.02562 * 4 3 2 27 27 H 1.07995 * 119.92879 * 180.02562 * 5 4 3 28 28 H 1.08010 * 119.84560 * 180.02562 * 6 5 4 29 29 H 1.09006 * 113.61307 * 25.43343 * 10 8 7 30 30 H 1.08999 * 113.69146 * 254.53828 * 10 8 7 31 31 H 0.96998 * 120.00318 * 287.46338 * 13 11 10 32 32 H 1.08003 * 125.80323 * 0.02562 * 17 16 14 33 33 H 1.08994 * 109.47316 * 240.00129 * 20 19 18 34 34 H 0.96704 * 114.00051 * 180.02562 * 21 20 19 35 35 H 1.48504 * 109.99818 * 298.67533 * 22 20 19 36 36 H 1.48499 * 110.00259 * 59.99628 * 22 20 19 37 37 H 1.08005 * 127.01824 * 180.02562 * 23 19 18 38 38 H 1.09004 * 113.61451 * 105.47354 * 24 8 7 39 39 H 1.08994 * 113.61477 * 334.56656 * 24 8 7 40 40 H 1.08003 * 120.07640 * 179.71712 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2697 -1.1720 0.2859 5 6 4.6494 -1.1644 0.2837 6 6 5.3374 0.0014 -0.0015 7 6 4.6482 1.1672 -0.2858 8 6 5.4063 2.4325 -0.5947 9 1 4.7687 3.3165 -0.6086 10 6 6.6826 2.6066 0.2453 11 6 7.3560 3.1377 -1.0311 12 1 8.3815 2.7918 -1.1601 13 7 7.2167 4.5848 -1.2116 14 6 8.2800 5.3923 -1.0274 15 8 9.3551 4.9196 -0.7118 16 6 8.1400 6.8481 -1.2095 17 6 7.0136 7.5300 -1.5662 18 8 7.3081 8.8325 -1.6193 19 6 8.5986 9.0444 -1.3176 20 6 9.2788 10.3889 -1.2838 21 8 9.7903 10.6311 0.0284 22 14 8.0500 11.7177 -1.7257 23 6 9.1867 7.8682 -1.0509 24 6 6.3247 2.3160 -1.8227 25 6 3.2689 1.1753 -0.2813 26 1 2.7339 -2.0831 0.5075 27 1 5.1936 -2.0708 0.5042 28 1 6.4175 0.0017 -0.0023 29 1 7.1026 1.6658 0.6014 30 1 6.5898 3.3539 1.0333 31 1 6.3593 4.9619 -1.4638 32 1 6.0474 7.0920 -1.7689 33 1 10.0992 10.3992 -2.0012 34 1 10.2418 11.4809 0.1239 35 1 7.5339 11.4954 -3.1004 36 1 6.9266 11.7139 -0.7546 37 1 10.2181 7.7045 -0.7756 38 1 5.9417 2.8293 -2.7047 39 1 6.6469 1.2960 -2.0318 40 1 2.7323 2.0870 -0.4988 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_13456056.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:09 Heat of formation + Delta-G solvation = 40.543191 kcal Electronic energy + Delta-G solvation = -25251.992272 eV Core-core repulsion = 21387.394358 eV Total energy + Delta-G solvation = -3864.597913 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.115 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -43.78314 -41.72182 -40.40758 -39.00885 -38.00341 -37.32621 -34.80822 -33.89217 -32.42804 -32.35953 -31.60241 -27.03589 -26.91554 -26.39777 -25.25620 -24.54785 -22.98986 -22.25853 -21.10867 -20.85884 -19.13156 -18.98853 -18.72689 -17.58714 -17.38897 -17.25384 -17.09388 -16.69187 -16.13726 -16.05245 -15.85134 -15.70744 -15.19552 -15.10706 -14.96052 -14.53041 -14.20193 -14.17473 -14.14552 -14.06772 -13.76503 -13.72964 -13.64560 -13.10488 -12.99259 -12.73780 -12.69953 -12.12479 -12.00891 -11.88896 -11.43126 -11.10069 -10.91972 -10.60600 -10.20527 -10.09555 -9.86740 -9.81649 -5.15786 -0.33031 0.14121 0.16496 0.83508 1.08359 1.48621 1.61868 1.67339 1.88425 1.92766 1.94398 2.28267 2.74285 2.80827 3.16650 3.25719 3.46402 3.48063 3.51590 3.55242 3.66749 3.76127 3.80884 3.90349 3.94127 4.07843 4.13434 4.29164 4.30889 4.48549 4.53336 4.55494 4.57500 4.67782 4.74206 4.75149 4.81404 4.86375 4.95650 5.14794 5.18215 5.19697 5.33260 5.47573 5.65663 5.79122 6.34958 6.41192 6.48243 7.13634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.073 4.073 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.072 4.072 8 C -0.075 4.075 9 H 0.100 0.900 10 C -0.144 4.144 11 C 0.120 3.880 12 H 0.109 0.891 13 N -0.712 5.712 14 C 0.593 3.407 15 O -0.526 6.526 16 C -0.235 4.235 17 C 0.030 3.970 18 O -0.173 6.173 19 C -0.016 4.016 20 C -0.036 4.036 21 O -0.543 6.543 22 Si 0.712 3.288 23 C -0.116 4.116 24 C -0.135 4.135 25 C -0.067 4.067 26 H 0.133 0.867 27 H 0.136 0.864 28 H 0.133 0.867 29 H 0.098 0.902 30 H 0.077 0.923 31 H 0.398 0.602 32 H 0.214 0.786 33 H 0.096 0.904 34 H 0.392 0.608 35 H -0.252 1.252 36 H -0.250 1.250 37 H 0.165 0.835 38 H 0.078 0.922 39 H 0.102 0.898 40 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.411 3.280 -2.159 5.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.072 4.072 8 C -0.094 4.094 9 H 0.118 0.882 10 C -0.183 4.183 11 C 0.015 3.985 12 H 0.127 0.873 13 N -0.363 5.363 14 C 0.381 3.619 15 O -0.403 6.403 16 C -0.240 4.240 17 C -0.040 4.040 18 O -0.070 6.070 19 C -0.064 4.064 20 C -0.146 4.146 21 O -0.350 6.350 22 Si 0.611 3.389 23 C -0.136 4.136 24 C -0.173 4.173 25 C -0.088 4.088 26 H 0.151 0.849 27 H 0.154 0.846 28 H 0.150 0.850 29 H 0.117 0.883 30 H 0.096 0.904 31 H 0.233 0.767 32 H 0.230 0.770 33 H 0.114 0.886 34 H 0.241 0.759 35 H -0.177 1.177 36 H -0.174 1.174 37 H 0.182 0.818 38 H 0.097 0.903 39 H 0.120 0.880 40 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.163 2.769 -2.123 3.678 hybrid contribution 0.074 -0.674 -0.031 0.679 sum 1.237 2.095 -2.154 3.250 Atomic orbital electron populations 1.81314 1.12059 1.06993 1.08322 1.25743 0.92702 0.94105 0.94016 1.15984 0.84302 0.95678 1.06883 1.21246 0.94527 0.96770 0.96854 1.21137 0.93577 0.98761 0.99809 1.21312 1.00691 0.91945 0.96582 1.19582 0.92719 0.95236 0.99668 1.21637 0.95143 0.95272 0.97307 0.88199 1.23596 0.94919 1.02507 0.97264 1.21858 1.00956 0.79425 0.96275 0.87322 1.45486 1.12522 1.06676 1.71634 1.17209 0.83834 0.84501 0.76397 1.90823 1.26669 1.76233 1.46546 1.21497 0.95096 0.94319 1.13088 1.24465 0.99495 0.80319 0.99707 1.83699 1.27511 1.26855 1.68904 1.21174 0.81617 0.96224 1.07357 1.23798 1.04094 0.97296 0.89376 1.86463 1.77740 1.43352 1.27484 0.95100 0.79100 0.84210 0.80489 1.22499 1.00574 0.89008 1.01532 1.23452 0.95466 1.01495 0.96888 1.21074 0.93652 0.96793 0.97271 0.84888 0.84642 0.84965 0.88336 0.90442 0.76724 0.76976 0.88649 0.75917 1.17674 1.17405 0.81770 0.90285 0.88002 0.85066 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.02 18.54 41.84 0.78 -1.24 16 2 C 0.25 0.50 15.33 -22.48 -0.34 0.16 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.14 9.76 -39.16 -0.38 -0.25 16 5 C -0.11 0.33 10.03 -39.64 -0.40 -0.06 16 6 C -0.09 0.27 8.60 -39.49 -0.34 -0.07 16 7 C -0.07 0.19 5.28 -104.68 -0.55 -0.36 16 8 C -0.08 0.28 3.86 -90.96 -0.35 -0.07 16 9 H 0.10 -0.46 8.09 -51.93 -0.42 -0.88 16 10 C -0.14 0.38 7.25 -25.92 -0.19 0.19 16 11 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 12 H 0.11 -0.01 7.46 -51.93 -0.39 -0.39 16 13 N -0.71 1.03 5.26 -54.10 -0.28 0.75 16 14 C 0.59 1.43 7.81 -12.54 -0.10 1.33 16 15 O -0.53 -3.42 16.58 5.27 0.09 -3.33 16 16 C -0.24 -0.43 6.31 -103.28 -0.65 -1.08 16 17 C 0.03 -0.02 11.61 30.08 0.35 0.33 16 18 O -0.17 -0.32 8.89 7.67 0.07 -0.25 16 19 C -0.02 -0.03 6.24 -35.74 -0.22 -0.26 16 20 C -0.04 0.03 2.97 36.01 0.11 0.14 16 21 O -0.54 0.38 12.84 -35.23 -0.45 -0.07 16 22 Si 0.71 -1.28 32.08 -169.99 -5.45 -6.73 16 23 C -0.12 -0.34 10.88 -37.46 -0.41 -0.75 16 24 C -0.14 0.52 7.29 -25.91 -0.19 0.33 16 25 C -0.07 0.12 9.41 -39.17 -0.37 -0.24 16 26 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 27 H 0.14 -0.63 8.06 -52.49 -0.42 -1.06 16 28 H 0.13 -0.61 6.64 -52.48 -0.35 -0.96 16 29 H 0.10 -0.32 6.30 -51.93 -0.33 -0.65 16 30 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.40 -1.77 7.67 -40.82 -0.31 -2.09 16 32 H 0.21 -1.17 7.47 -52.48 -0.39 -1.56 16 33 H 0.10 -0.30 7.96 -51.93 -0.41 -0.71 16 34 H 0.39 -2.43 8.74 45.56 0.40 -2.03 16 35 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 36 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 37 H 0.16 0.47 8.06 -52.48 -0.42 0.04 16 38 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 39 H 0.10 -0.42 7.72 -51.93 -0.40 -0.82 16 40 H 0.13 -0.39 8.05 -52.48 -0.42 -0.82 16 LS Contribution 357.66 15.07 5.39 5.39 Total: 0.00 -12.08 357.66 -9.15 -21.23 By element: Atomic # 1 Polarization: -9.63 SS G_CDS: -4.34 Total: -13.97 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -4.94 Total: -1.77 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: 0.49 Total: -0.49 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.30 Total: -3.66 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.45 Total: -6.73 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -12.08 -9.15 -21.23 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13456056.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.770 kcal (2) G-P(sol) polarization free energy of solvation -12.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.226 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds