Wall clock time and date at job start Tue Mar 9 2021 12:53:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.43194 * 179.97438 * 2 1 4 4 C 1.39612 * 120.15206 * 85.83188 * 3 2 1 5 5 C 1.37967 * 119.84751 * 179.97438 * 4 3 2 6 6 C 1.38335 * 120.15287 * 0.02562 * 5 4 3 7 7 C 1.38388 * 120.30468 * 359.97438 * 6 5 4 8 8 C 1.50700 * 119.92255 * 179.97438 * 7 6 5 9 9 H 1.09002 * 112.84909 * 191.19599 * 8 7 6 10 10 C 1.53783 * 113.69114 * 322.46059 * 8 7 6 11 11 C 1.53780 * 87.07812 * 139.99586 * 10 8 7 12 12 H 1.09004 * 113.69001 * 220.00428 * 11 10 8 13 13 N 1.46501 * 113.61524 * 89.12072 * 11 10 8 14 14 C 1.34771 * 120.00458 * 107.49963 * 13 11 10 15 15 O 1.21283 * 120.00108 * 359.97438 * 14 13 11 16 16 C 1.50696 * 120.00166 * 179.97438 * 14 13 11 17 17 C 1.50709 * 109.47071 * 179.97438 * 16 14 13 18 18 C 1.34843 * 125.88988 * 84.97789 * 17 16 14 19 19 C 1.40890 * 107.41713 * 180.02562 * 18 17 16 20 20 C 1.34842 * 107.41687 * 0.02562 * 19 18 17 21 21 C 1.50706 * 125.89233 * 179.97438 * 20 19 18 22 22 O 1.42895 * 109.47147 * 245.02719 * 21 20 19 23 23 Si 1.86299 * 109.46748 * 5.02361 * 21 20 19 24 24 N 1.36338 * 125.88964 * 265.30543 * 17 16 14 25 25 C 1.53774 * 87.08415 * 334.56616 * 11 10 8 26 26 C 1.37923 * 120.15087 * 0.25552 * 7 6 5 27 27 H 1.08007 * 120.07596 * 359.96924 * 4 3 2 28 28 H 1.08001 * 119.92263 * 179.97438 * 5 4 3 29 29 H 1.08000 * 119.84739 * 179.97438 * 6 5 4 30 30 H 1.08998 * 113.61343 * 25.44670 * 10 8 7 31 31 H 1.09003 * 113.61173 * 254.54013 * 10 8 7 32 32 H 0.96999 * 119.99595 * 287.49722 * 13 11 10 33 33 H 1.09006 * 109.46893 * 60.00409 * 16 14 13 34 34 H 1.08999 * 109.47273 * 299.99730 * 16 14 13 35 35 H 1.08003 * 126.29190 * 0.02562 * 18 17 16 36 36 H 1.08004 * 126.29059 * 179.97438 * 19 18 17 37 37 H 1.09000 * 109.47318 * 125.01831 * 21 20 19 38 38 H 0.96700 * 113.99916 * 179.97438 * 22 21 20 39 39 H 1.48501 * 109.99913 * 178.67998 * 23 21 20 40 40 H 1.48502 * 110.00097 * 300.00038 * 23 21 20 41 41 H 0.97004 * 125.64061 * 359.97438 * 24 17 16 42 42 H 1.09007 * 113.61592 * 139.97970 * 25 11 10 43 43 H 1.08998 * 113.61649 * 270.80276 * 25 11 10 44 44 H 1.08002 * 120.07761 * 179.72208 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2693 -0.0868 -1.2040 5 6 4.6489 -0.0851 -1.1968 6 6 5.3374 0.0024 -0.0001 7 6 4.6486 0.0893 1.1971 8 6 5.4073 0.1837 2.4957 9 1 4.7690 0.0516 3.3694 10 6 6.6832 -0.6740 2.5297 11 6 7.3564 0.4970 3.2648 12 1 8.3825 0.6818 2.9470 13 7 7.2148 0.4345 4.7217 14 6 8.2767 0.1190 5.4891 15 8 9.3497 -0.1137 4.9737 16 6 8.1311 0.0553 6.9877 17 6 9.4546 -0.3159 7.6057 18 6 10.4510 0.5390 7.9131 19 6 11.5012 -0.2192 8.4674 20 6 11.1068 -1.5086 8.4769 21 6 11.9144 -2.6759 8.9833 22 8 12.2198 -3.5513 7.8960 23 14 13.4975 -2.0529 9.7424 24 7 9.8533 -1.5749 7.9445 25 6 6.3262 1.4137 2.5844 26 6 3.2694 0.0840 1.2047 27 1 2.7330 -0.1557 -2.1390 28 1 5.1927 -0.1531 -2.1274 29 1 6.4174 0.0029 -0.0001 30 1 7.1039 -0.8701 1.5434 31 1 6.5882 -1.5741 3.1371 32 1 6.3566 0.6202 5.1339 33 1 7.3853 -0.6956 7.2486 34 1 7.8144 1.0282 7.3636 35 1 10.4451 1.6084 7.7622 36 1 12.4485 0.1622 8.8191 37 1 11.3394 -3.2168 9.7349 38 1 12.7395 -4.3264 8.1492 39 1 14.2884 -3.1917 10.2742 40 1 14.2907 -1.3135 8.7279 41 1 9.3308 -2.3838 7.8281 42 1 5.9428 2.1990 3.2360 43 1 6.6498 1.7895 1.6138 44 1 2.7331 0.1473 2.1400 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_14644196.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:15 Heat of formation + Delta-G solvation = 61.476352 kcal Electronic energy + Delta-G solvation = -26900.384930 eV Core-core repulsion = 22978.875789 eV Total energy + Delta-G solvation = -3921.509140 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.142 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.30940 -41.49719 -40.34658 -38.98028 -37.84475 -37.45541 -34.58513 -33.14600 -32.24568 -31.94178 -31.81618 -29.44006 -26.64341 -26.28236 -25.16636 -24.69235 -22.83892 -22.16481 -21.32222 -20.99306 -20.67110 -18.99790 -18.62828 -18.25337 -18.00300 -17.28337 -16.93590 -16.51357 -16.31949 -15.98241 -15.79477 -15.33842 -15.17869 -15.07665 -14.84506 -14.66420 -14.50972 -14.30168 -14.17422 -14.02163 -13.98499 -13.78312 -13.58071 -13.40761 -13.33911 -13.01136 -12.84531 -12.76279 -12.49236 -12.42365 -11.95522 -11.75137 -11.64710 -11.19801 -10.96267 -10.60845 -10.03453 -9.91487 -9.78389 -9.66231 -8.94164 -4.88191 -0.19874 0.37045 1.06228 1.30506 1.55865 1.62365 1.64378 1.85932 1.90257 2.00030 2.32110 2.52022 2.82108 2.85146 3.40066 3.52520 3.70444 3.72607 3.76803 3.92790 3.93649 4.01678 4.09041 4.18291 4.20225 4.25096 4.30388 4.32377 4.50214 4.51809 4.65423 4.73338 4.78641 4.82720 4.84028 4.93123 5.02204 5.07244 5.08774 5.22960 5.25821 5.32291 5.34424 5.42101 5.55404 5.71550 5.88910 6.01893 6.14224 6.39246 6.52729 6.57608 6.70612 7.31473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.473 5.473 2 C 0.277 3.723 3 C -0.046 4.046 4 C -0.076 4.076 5 C -0.118 4.118 6 C -0.085 4.085 7 C -0.075 4.075 8 C -0.064 4.064 9 H 0.116 0.884 10 C -0.143 4.143 11 C 0.111 3.889 12 H 0.078 0.922 13 N -0.700 5.700 14 C 0.512 3.488 15 O -0.579 6.579 16 C -0.066 4.066 17 C 0.035 3.965 18 C -0.200 4.200 19 C -0.205 4.205 20 C 0.017 3.983 21 C -0.064 4.064 22 O -0.566 6.566 23 Si 0.791 3.209 24 N -0.537 5.537 25 C -0.124 4.124 26 C -0.066 4.066 27 H 0.140 0.860 28 H 0.153 0.847 29 H 0.146 0.854 30 H 0.098 0.902 31 H 0.066 0.934 32 H 0.419 0.581 33 H 0.131 0.869 34 H 0.147 0.853 35 H 0.143 0.857 36 H 0.146 0.854 37 H 0.097 0.903 38 H 0.396 0.604 39 H -0.278 1.278 40 H -0.308 1.308 41 H 0.419 0.581 42 H 0.089 0.911 43 H 0.102 0.898 44 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.164 0.759 4.048 4.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.149 5.149 2 C -0.038 4.038 3 C -0.049 4.049 4 C -0.097 4.097 5 C -0.136 4.136 6 C -0.103 4.103 7 C -0.075 4.075 8 C -0.082 4.082 9 H 0.134 0.866 10 C -0.182 4.182 11 C 0.006 3.994 12 H 0.097 0.903 13 N -0.352 5.352 14 C 0.299 3.701 15 O -0.458 6.458 16 C -0.106 4.106 17 C -0.080 4.080 18 C -0.224 4.224 19 C -0.230 4.230 20 C -0.096 4.096 21 C -0.172 4.172 22 O -0.376 6.376 23 Si 0.695 3.305 24 N -0.132 5.132 25 C -0.162 4.162 26 C -0.087 4.087 27 H 0.157 0.843 28 H 0.171 0.829 29 H 0.164 0.836 30 H 0.116 0.884 31 H 0.085 0.915 32 H 0.257 0.743 33 H 0.149 0.851 34 H 0.165 0.835 35 H 0.161 0.839 36 H 0.163 0.837 37 H 0.115 0.885 38 H 0.247 0.753 39 H -0.204 1.204 40 H -0.236 1.236 41 H 0.257 0.743 42 H 0.108 0.892 43 H 0.121 0.879 44 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.743 0.873 3.328 3.520 hybrid contribution -0.094 -1.468 -0.832 1.690 sum -0.837 -0.594 2.496 2.699 Atomic orbital electron populations 1.81322 1.13771 1.10945 1.08878 1.26147 0.93067 0.92207 0.92342 1.16101 0.82894 1.09722 0.96200 1.21406 0.95108 0.96498 0.96667 1.21368 0.93181 0.99364 0.99642 1.21583 1.01532 0.95597 0.91622 1.19703 0.92426 0.99762 0.95584 1.21602 0.94585 0.96970 0.95019 0.86636 1.23571 0.95644 0.97354 1.01593 1.21839 0.99821 0.97691 0.80095 0.90344 1.45546 1.13132 1.70561 1.06005 1.21059 0.83463 0.75360 0.90216 1.90775 1.28959 1.50093 1.75994 1.20271 0.93538 1.07565 0.89235 1.19949 0.98242 0.84102 1.05663 1.20838 0.94261 0.99839 1.07488 1.20873 1.01094 0.92488 1.08524 1.19875 0.87189 0.95219 1.07328 1.24709 1.08395 0.91637 0.92451 1.86577 1.76282 1.39055 1.35719 0.93561 0.72481 0.81109 0.83337 1.41857 1.14275 1.08550 1.48568 1.23387 0.94436 0.96315 1.02069 1.21216 0.94028 0.96675 0.96738 0.84254 0.82883 0.83616 0.88357 0.91547 0.74343 0.85101 0.83488 0.83878 0.83655 0.88515 0.75314 1.20431 1.23582 0.74348 0.89236 0.87916 0.83962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.13 18.54 19.00 0.35 -4.78 16 2 C 0.28 1.22 15.33 88.33 1.35 2.57 16 3 C -0.05 0.08 5.73 -21.36 -0.12 -0.04 16 4 C -0.08 0.34 9.76 22.54 0.22 0.56 16 5 C -0.12 0.84 10.03 22.23 0.22 1.06 16 6 C -0.08 0.64 8.61 22.33 0.19 0.84 16 7 C -0.07 0.53 5.28 -19.90 -0.11 0.42 16 8 C -0.06 0.61 3.85 -11.01 -0.04 0.57 16 9 H 0.12 -1.42 8.09 -2.39 -0.02 -1.44 16 10 C -0.14 0.91 7.25 31.12 0.23 1.13 16 11 C 0.11 -0.52 4.32 45.51 0.20 -0.33 16 12 H 0.08 0.11 7.46 -2.39 -0.02 0.09 16 13 N -0.70 4.43 5.26 -440.05 -2.32 2.12 16 14 C 0.51 0.25 7.82 87.66 0.69 0.94 16 15 O -0.58 -7.28 15.63 -3.04 -0.05 -7.33 16 16 C -0.07 0.37 6.24 29.10 0.18 0.55 16 17 C 0.03 0.10 5.66 41.08 0.23 0.33 16 18 C -0.20 -1.22 10.76 22.14 0.24 -0.98 16 19 C -0.20 -1.42 9.37 22.14 0.21 -1.22 16 20 C 0.02 0.10 6.53 41.08 0.27 0.37 16 21 C -0.06 -0.09 3.07 71.24 0.22 0.13 16 22 O -0.57 -2.60 12.86 -148.98 -1.92 -4.52 16 23 Si 0.79 -0.04 30.60 68.60 2.10 2.06 16 24 N -0.54 -1.90 6.07 -171.12 -1.04 -2.94 16 25 C -0.12 1.16 7.29 31.12 0.23 1.38 16 26 C -0.07 0.33 9.41 22.54 0.21 0.55 16 27 H 0.14 -0.88 8.06 -2.91 -0.02 -0.90 16 28 H 0.15 -1.67 8.06 -2.91 -0.02 -1.70 16 29 H 0.15 -1.54 6.65 -2.91 -0.02 -1.56 16 30 H 0.10 -0.67 6.31 -2.39 -0.02 -0.69 16 31 H 0.07 -0.28 8.14 -2.39 -0.02 -0.29 16 32 H 0.42 -5.61 8.70 -92.71 -0.81 -6.41 16 33 H 0.13 -1.54 8.14 -2.38 -0.02 -1.56 16 34 H 0.15 -1.66 8.14 -2.39 -0.02 -1.68 16 35 H 0.14 0.49 8.06 -2.91 -0.02 0.47 16 36 H 0.15 0.63 6.24 -2.91 -0.02 0.61 16 37 H 0.10 -0.39 7.96 -2.39 -0.02 -0.41 16 38 H 0.40 -1.68 8.74 -74.06 -0.65 -2.33 16 39 H -0.28 -0.66 7.11 99.48 0.71 0.05 16 40 H -0.31 -2.81 7.11 99.48 0.71 -2.11 16 41 H 0.42 -0.26 8.96 -92.71 -0.83 -1.09 16 42 H 0.09 -0.96 8.14 -2.38 -0.02 -0.98 16 43 H 0.10 -0.97 7.73 -2.39 -0.02 -0.99 16 44 H 0.14 -1.09 8.05 -2.91 -0.02 -1.12 16 Total: 0.00 -31.16 381.15 0.58 -30.58 By element: Atomic # 1 Polarization: -22.85 SS G_CDS: -1.17 Total: -24.02 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: 4.61 Total: 8.83 kcal Atomic # 7 Polarization: -2.60 SS G_CDS: -3.00 Total: -5.60 kcal Atomic # 8 Polarization: -9.89 SS G_CDS: -1.96 Total: -11.85 kcal Atomic # 14 Polarization: -0.04 SS G_CDS: 2.10 Total: 2.06 kcal Total: -31.16 0.58 -30.58 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_14644196.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.057 kcal (2) G-P(sol) polarization free energy of solvation -31.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.577 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.581 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.476 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds