Wall clock time and date at job start Tue Mar 9 2021 12:53:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39608 * 120.15477 * 2.78241 * 3 2 1 5 5 C 1.37968 * 119.84901 * 179.97438 * 4 3 2 6 6 C 1.38341 * 120.14786 * 359.97438 * 5 4 3 7 7 C 1.38384 * 120.30518 * 359.97438 * 6 5 4 8 8 C 1.50703 * 119.91989 * 179.97438 * 7 6 5 9 9 H 1.09003 * 112.84376 * 168.80353 * 8 7 6 10 10 C 1.53779 * 113.61746 * 299.99941 * 8 7 6 11 11 C 1.53789 * 87.08024 * 140.06681 * 10 8 7 12 12 H 1.08994 * 113.61359 * 219.93397 * 11 10 8 13 13 N 1.46501 * 113.61246 * 89.11640 * 11 10 8 14 14 C 1.34774 * 119.99594 * 154.99939 * 13 11 10 15 15 O 1.21279 * 120.00476 * 0.02562 * 14 13 11 16 16 C 1.50705 * 119.99676 * 180.02562 * 14 13 11 17 17 C 1.53546 * 109.82427 * 80.00077 * 16 14 13 18 18 C 1.53032 * 108.56341 * 180.48764 * 17 16 14 19 19 C 1.50208 * 110.18023 * 310.51166 * 18 17 16 20 20 C 1.50693 * 118.54770 * 199.94294 * 19 18 17 21 21 O 1.42898 * 109.47235 * 70.00389 * 20 19 18 22 22 Si 1.86305 * 109.46954 * 190.00173 * 20 19 18 23 23 C 1.30767 * 123.15991 * 19.96997 * 19 18 17 24 24 N 1.38931 * 121.74983 * 359.66104 * 23 19 18 25 25 C 1.53778 * 113.69269 * 37.54084 * 8 7 6 26 26 C 1.37921 * 120.15233 * 0.25646 * 7 6 5 27 27 H 1.08004 * 120.07386 * 0.02562 * 4 3 2 28 28 H 1.07997 * 119.92652 * 179.97438 * 5 4 3 29 29 H 1.08001 * 119.84733 * 180.02562 * 6 5 4 30 30 H 1.08997 * 113.61123 * 25.51920 * 10 8 7 31 31 H 1.09003 * 113.69378 * 254.62449 * 10 8 7 32 32 H 0.97001 * 119.99860 * 335.00300 * 13 11 10 33 33 H 1.09002 * 109.81493 * 319.13619 * 16 14 13 34 34 H 1.09001 * 109.61905 * 60.76131 * 17 16 14 35 35 H 1.09003 * 109.61797 * 300.21244 * 17 16 14 36 36 H 1.09002 * 109.32995 * 70.68866 * 18 17 16 37 37 H 1.08996 * 109.33232 * 190.34132 * 18 17 16 38 38 H 1.08996 * 109.47512 * 310.00284 * 20 19 18 39 39 H 0.96699 * 114.00039 * 59.99281 * 21 20 19 40 40 H 1.48498 * 109.99776 * 180.02562 * 22 20 19 41 41 H 1.48496 * 109.99894 * 301.31923 * 22 20 19 42 42 H 1.07996 * 119.17862 * 179.63029 * 23 19 18 43 43 H 0.97001 * 120.55852 * 193.29416 * 24 23 19 44 44 H 1.09000 * 113.61722 * 105.45643 * 25 8 7 45 45 H 1.09000 * 113.61486 * 334.55040 * 25 8 7 46 46 H 1.08006 * 120.07719 * 179.74361 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2698 -1.2048 -0.0586 5 6 4.6495 -1.1968 -0.0588 6 6 5.3374 0.0021 -0.0016 7 6 4.6480 1.2007 0.0556 8 6 5.4061 2.5016 0.1182 9 1 4.7674 3.3714 -0.0356 10 6 6.3244 2.6211 1.3459 11 6 7.3548 3.2792 0.4130 12 1 8.3809 2.9664 0.6060 13 7 7.2125 4.7339 0.3147 14 6 8.2743 5.4938 -0.0193 15 8 9.3475 4.9733 -0.2388 16 6 8.1280 6.9904 -0.1199 17 6 8.1775 7.6139 1.2824 18 6 8.0144 9.1295 1.1477 19 6 8.9584 9.6619 0.1076 20 6 9.2971 11.1301 0.1265 21 8 10.1097 11.4169 1.2664 22 14 10.2269 11.5729 -1.4261 23 6 9.5016 8.9123 -0.8160 24 7 9.2445 7.5493 -0.8961 25 6 6.6823 2.5151 -0.7397 26 6 3.2688 1.2070 0.0613 27 1 2.7340 -2.1414 -0.1045 28 1 5.1937 -2.1285 -0.1037 29 1 6.4174 0.0028 -0.0024 30 1 6.6478 1.6595 1.7444 31 1 5.9417 3.2912 2.1157 32 1 6.3540 5.1502 0.4899 33 1 7.1817 7.2376 -0.6011 34 1 9.1364 7.3889 1.7493 35 1 7.3677 7.2111 1.8908 36 1 6.9894 9.3575 0.8552 37 1 8.2297 9.6022 2.1059 38 1 8.3785 11.7143 0.1790 39 1 10.9455 10.9309 1.2860 40 1 10.5673 13.0183 -1.4193 41 1 11.4657 10.7602 -1.5254 42 1 10.1675 9.3639 -1.5363 43 1 9.7925 6.9761 -1.4548 44 1 6.5873 3.1001 -1.6545 45 1 7.1035 1.5245 -0.9113 46 1 2.7320 2.1430 0.1101 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_15413834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:18 Heat of formation + Delta-G solvation = 38.889771 kcal Electronic energy + Delta-G solvation = -27913.556448 eV Core-core repulsion = 23963.756402 eV Total energy + Delta-G solvation = -3949.800046 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.94643 -41.05572 -39.89793 -38.97507 -37.44923 -37.30598 -34.86066 -33.25907 -33.11178 -32.44160 -31.97741 -27.83911 -26.96372 -26.29962 -25.46786 -24.97214 -23.78094 -23.03373 -22.05640 -20.92928 -19.51940 -19.15330 -19.14078 -18.11747 -17.52912 -17.38314 -16.90693 -16.73680 -16.37503 -16.29375 -15.92305 -15.61059 -15.37553 -15.25507 -15.21283 -15.08473 -14.77098 -14.41874 -14.30057 -14.19215 -13.98799 -13.88660 -13.75403 -13.68037 -13.17951 -13.13025 -13.02335 -12.92670 -12.73073 -12.25236 -12.03895 -12.01188 -11.92992 -11.64829 -11.47496 -11.28368 -10.92353 -10.30740 -10.27265 -10.11617 -9.88783 -8.53152 -4.91023 -0.34917 0.12527 1.28895 1.37960 1.42939 1.60865 1.66343 1.72871 1.86917 2.03959 2.54275 2.72474 2.79261 3.20869 3.36545 3.43117 3.49605 3.57118 3.64007 3.66007 3.72753 3.78503 3.87721 3.91237 3.93526 4.05547 4.22677 4.26852 4.31641 4.43283 4.49554 4.51325 4.54417 4.61264 4.64309 4.71562 4.73342 4.78186 4.80223 4.89821 4.97892 5.11753 5.12929 5.16718 5.23004 5.28698 5.41598 5.52071 5.63556 6.13393 6.30448 6.47158 6.58443 6.77027 6.98111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.411 5.411 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.073 4.073 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.073 4.073 8 C -0.074 4.074 9 H 0.101 0.899 10 C -0.135 4.135 11 C 0.118 3.882 12 H 0.107 0.893 13 N -0.709 5.709 14 C 0.516 3.484 15 O -0.528 6.528 16 C 0.136 3.864 17 C -0.126 4.126 18 C -0.054 4.054 19 C -0.274 4.274 20 C -0.051 4.051 21 O -0.536 6.536 22 Si 0.667 3.333 23 C 0.138 3.862 24 N -0.731 5.731 25 C -0.143 4.143 26 C -0.067 4.067 27 H 0.133 0.867 28 H 0.135 0.865 29 H 0.132 0.868 30 H 0.101 0.899 31 H 0.079 0.921 32 H 0.404 0.596 33 H 0.093 0.907 34 H 0.075 0.925 35 H 0.079 0.921 36 H 0.068 0.932 37 H 0.078 0.922 38 H 0.109 0.891 39 H 0.372 0.628 40 H -0.261 1.261 41 H -0.264 1.264 42 H 0.135 0.865 43 H 0.409 0.591 44 H 0.077 0.923 45 H 0.097 0.903 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.616 -1.753 -1.032 2.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.086 5.086 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.106 4.106 7 C -0.073 4.073 8 C -0.093 4.093 9 H 0.119 0.881 10 C -0.173 4.173 11 C 0.013 3.987 12 H 0.125 0.875 13 N -0.361 5.361 14 C 0.301 3.699 15 O -0.403 6.403 16 C 0.027 3.973 17 C -0.165 4.165 18 C -0.091 4.091 19 C -0.284 4.284 20 C -0.162 4.162 21 O -0.342 6.342 22 Si 0.570 3.430 23 C 0.018 3.982 24 N -0.365 5.365 25 C -0.182 4.182 26 C -0.087 4.087 27 H 0.151 0.849 28 H 0.153 0.847 29 H 0.150 0.850 30 H 0.119 0.881 31 H 0.098 0.902 32 H 0.239 0.761 33 H 0.110 0.890 34 H 0.094 0.906 35 H 0.097 0.903 36 H 0.087 0.913 37 H 0.096 0.904 38 H 0.126 0.874 39 H 0.220 0.780 40 H -0.186 1.186 41 H -0.190 1.190 42 H 0.151 0.849 43 H 0.246 0.754 44 H 0.095 0.905 45 H 0.116 0.884 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -0.232 -1.448 -1.328 1.978 hybrid contribution 0.818 -0.427 0.759 1.195 sum 0.586 -1.875 -0.569 2.045 Atomic orbital electron populations 1.81313 1.12065 1.06890 1.08355 1.25740 0.92698 0.94132 0.94037 1.15987 0.84311 0.95017 1.07481 1.21247 0.94523 0.96774 0.96846 1.21134 0.93587 0.98701 0.99881 1.21303 1.00640 0.91688 0.96941 1.19579 0.92733 0.94943 1.00008 1.21630 0.95118 0.95009 0.97520 0.88079 1.23447 0.95473 1.02095 0.96326 1.21877 1.00827 0.79385 0.96642 0.87523 1.45608 1.12882 1.06648 1.70941 1.20635 0.84041 0.89023 0.76165 1.90743 1.26666 1.74393 1.48492 1.20999 0.92229 0.89370 0.94704 1.21874 1.03534 0.97007 0.94106 1.19970 0.97954 0.92904 0.98311 1.20825 1.09978 0.96275 1.01359 1.24691 0.99216 0.94790 0.97498 1.86571 1.34215 1.69407 1.44033 0.95423 0.83834 0.80198 0.83571 1.20428 0.97894 0.83786 0.96138 1.44281 1.34856 1.05889 1.51439 1.23577 0.94999 1.01635 0.97963 1.21077 0.93646 0.96788 0.97233 0.84891 0.84671 0.85034 0.88107 0.90207 0.76142 0.88953 0.90640 0.90282 0.91322 0.90360 0.87352 0.78023 1.18607 1.19025 0.84853 0.75410 0.90475 0.88428 0.85002 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.84 18.54 41.84 0.78 -1.07 16 2 C 0.25 0.38 15.33 -22.47 -0.34 0.04 16 3 C -0.02 0.03 5.73 -106.93 -0.61 -0.58 16 4 C -0.07 0.17 9.76 -39.17 -0.38 -0.21 16 5 C -0.12 0.39 10.03 -39.64 -0.40 0.00 16 6 C -0.09 0.32 8.61 -39.49 -0.34 -0.02 16 7 C -0.07 0.25 5.28 -104.68 -0.55 -0.30 16 8 C -0.07 0.35 3.85 -90.96 -0.35 0.00 16 9 H 0.10 -0.56 8.09 -51.93 -0.42 -0.98 16 10 C -0.14 0.64 7.29 -25.92 -0.19 0.46 16 11 C 0.12 -0.39 4.32 -67.11 -0.29 -0.68 16 12 H 0.11 -0.14 7.46 -51.93 -0.39 -0.53 16 13 N -0.71 2.52 5.26 -53.01 -0.28 2.25 16 14 C 0.52 -0.41 7.10 -10.98 -0.08 -0.49 16 15 O -0.53 -1.72 15.66 5.56 0.09 -1.63 16 16 C 0.14 -0.27 3.36 -68.51 -0.23 -0.50 16 17 C -0.13 0.24 5.47 -26.43 -0.14 0.10 16 18 C -0.05 0.07 5.86 -28.10 -0.16 -0.10 16 19 C -0.27 0.16 5.36 -101.24 -0.54 -0.38 16 20 C -0.05 0.01 2.81 36.00 0.10 0.11 16 21 O -0.54 -0.93 12.88 -35.23 -0.45 -1.39 16 22 Si 0.67 -0.46 29.94 -169.99 -5.09 -5.55 16 23 C 0.14 -0.12 9.60 -15.98 -0.15 -0.27 16 24 N -0.73 0.55 5.47 -55.42 -0.30 0.24 16 25 C -0.14 0.56 7.25 -25.92 -0.19 0.37 16 26 C -0.07 0.17 9.41 -39.17 -0.37 -0.20 16 27 H 0.13 -0.45 8.06 -52.48 -0.42 -0.87 16 28 H 0.14 -0.69 8.06 -52.49 -0.42 -1.12 16 29 H 0.13 -0.69 6.65 -52.49 -0.35 -1.04 16 30 H 0.10 -0.49 7.72 -51.93 -0.40 -0.89 16 31 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.40 -2.45 8.70 -40.82 -0.36 -2.80 16 33 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 34 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.11 -0.06 7.96 -51.93 -0.41 -0.47 16 39 H 0.37 -0.31 8.70 45.56 0.40 0.09 16 40 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 41 H -0.26 -0.32 6.83 56.52 0.39 0.07 16 42 H 0.13 -0.24 4.26 -52.49 -0.22 -0.46 16 43 H 0.41 -0.17 8.08 -40.82 -0.33 -0.50 16 44 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 45 H 0.10 -0.42 6.31 -51.93 -0.33 -0.75 16 46 H 0.13 -0.48 8.05 -52.48 -0.42 -0.90 16 LS Contribution 383.22 15.07 5.77 5.77 Total: 0.00 -9.00 383.22 -10.97 -19.97 By element: Atomic # 1 Polarization: -9.67 SS G_CDS: -6.25 Total: -15.92 kcal Atomic # 6 Polarization: 2.55 SS G_CDS: -5.23 Total: -2.68 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: 0.19 Total: 1.42 kcal Atomic # 8 Polarization: -2.65 SS G_CDS: -0.37 Total: -3.02 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.09 Total: -5.55 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.00 -10.97 -19.97 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_15413834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.862 kcal (2) G-P(sol) polarization free energy of solvation -9.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.972 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds