Wall clock time and date at job start Tue Mar 9 2021 12:53:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39612 * 120.14955 * 169.87853 * 3 2 1 5 5 C 1.37968 * 119.84628 * 179.97438 * 4 3 2 6 6 C 1.38340 * 120.15449 * 359.74616 * 5 4 3 7 7 C 1.38389 * 120.30126 * 0.50780 * 6 5 4 8 8 C 1.50699 * 119.92185 * 179.76415 * 7 6 5 9 9 H 1.09006 * 112.84776 * 168.53207 * 8 7 6 10 10 C 1.53778 * 113.61622 * 299.72424 * 8 7 6 11 11 C 1.53785 * 87.08000 * 139.98296 * 10 8 7 12 12 H 1.08996 * 113.61070 * 219.93637 * 11 10 8 13 13 N 1.46501 * 113.61194 * 89.11865 * 11 10 8 14 14 C 1.34774 * 119.99563 * 155.00031 * 13 11 10 15 15 O 1.21278 * 120.00283 * 359.97438 * 14 13 11 16 16 C 1.50704 * 119.99611 * 179.97438 * 14 13 11 17 17 O 1.42904 * 109.47033 * 179.97438 * 16 14 13 18 18 C 1.35895 * 117.00129 * 179.97438 * 17 16 14 19 19 C 1.38709 * 120.05826 * 179.97438 * 18 17 16 20 20 C 1.50705 * 120.02687 * 0.02562 * 19 18 17 21 21 O 1.42900 * 109.47128 * 285.02154 * 20 19 18 22 22 Si 1.86301 * 109.46951 * 165.02034 * 20 19 18 23 23 C 1.38164 * 119.94688 * 180.02562 * 19 18 17 24 24 C 1.38245 * 120.05645 * 359.97438 * 23 19 18 25 25 C 1.38290 * 120.10982 * 0.02562 * 24 23 19 26 26 C 1.38126 * 120.05768 * 0.02562 * 25 24 23 27 27 C 1.53780 * 87.08164 * 334.56831 * 11 10 8 28 28 C 1.37929 * 120.15130 * 359.49100 * 7 6 5 29 29 H 1.08003 * 120.07926 * 359.95562 * 4 3 2 30 30 H 1.08004 * 119.92619 * 180.02562 * 5 4 3 31 31 H 1.07993 * 119.85127 * 180.27002 * 6 5 4 32 32 H 1.09002 * 113.61681 * 25.43486 * 10 8 7 33 33 H 1.09004 * 113.69272 * 254.54223 * 10 8 7 34 34 H 0.97003 * 120.00134 * 334.99688 * 13 11 10 35 35 H 1.09001 * 109.47213 * 59.99895 * 16 14 13 36 36 H 1.09002 * 109.47209 * 299.99541 * 16 14 13 37 37 H 1.08997 * 109.46741 * 45.02259 * 20 19 18 38 38 H 0.96705 * 113.99836 * 300.00327 * 21 20 19 39 39 H 1.48498 * 110.00059 * 58.68318 * 22 20 19 40 40 H 1.48502 * 109.99868 * 180.02562 * 22 20 19 41 41 H 1.07997 * 119.97398 * 179.97438 * 23 19 18 42 42 H 1.07995 * 119.94685 * 179.74958 * 24 23 19 43 43 H 1.08005 * 119.97140 * 179.97438 * 25 24 23 44 44 H 1.07998 * 120.03163 * 179.97438 * 26 25 24 45 45 H 1.08995 * 113.61697 * 139.98106 * 27 11 10 46 46 H 1.08993 * 113.61409 * 270.88630 * 27 11 10 47 47 H 1.07995 * 120.07687 * 180.27324 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2686 1.1894 -0.2122 5 6 4.6483 1.1829 -0.2103 6 6 5.3374 0.0031 0.0063 7 6 4.6492 -1.1798 0.2120 8 6 5.4085 -2.4610 0.4419 9 1 4.7706 -3.2753 0.7856 10 6 6.3280 -2.8505 -0.7276 11 6 7.3591 -3.2805 0.3292 12 1 8.3847 -3.0166 0.0712 13 7 7.2197 -4.6766 0.7510 14 6 8.2829 -5.3399 1.2470 15 8 9.3550 -4.7813 1.3437 16 6 8.1394 -6.7758 1.6814 17 8 9.3955 -7.2545 2.1665 18 6 9.4392 -8.5413 2.6013 19 6 10.6263 -9.0714 3.0847 20 6 11.8694 -8.2205 3.1289 21 8 12.3962 -8.0779 1.8082 22 14 13.1409 -9.0350 4.2201 23 6 10.6682 -10.3801 3.5257 24 6 9.5281 -11.1610 3.4860 25 6 8.3433 -10.6348 3.0045 26 6 8.2964 -9.3274 2.5614 27 6 6.6842 -2.2790 1.2812 28 6 3.2699 -1.1877 0.2128 29 1 2.7319 2.1119 -0.3776 30 1 5.1916 2.1019 -0.3739 31 1 6.4173 0.0044 0.0110 32 1 6.6496 -2.0020 -1.3315 33 1 5.9471 -3.6770 -1.3277 34 1 6.3623 -5.1234 0.6733 35 1 7.8231 -7.3823 0.8328 36 1 7.3941 -6.8429 2.4739 37 1 11.6227 -7.2375 3.5298 38 1 12.6380 -8.9150 1.3887 39 1 13.4623 -10.3891 3.7020 40 1 14.3715 -8.2055 4.2724 41 1 11.5923 -10.7934 3.9018 42 1 9.5638 -12.1849 3.8274 43 1 7.4540 -11.2470 2.9741 44 1 7.3710 -8.9171 2.1851 45 1 6.5898 -2.6442 2.3038 46 1 7.1031 -1.2743 1.2265 47 1 2.7341 -2.1107 0.3779 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_2989392.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:27 Heat of formation + Delta-G solvation = 17.768779 kcal Electronic energy + Delta-G solvation = -30472.320847 eV Core-core repulsion = 26167.433983 eV Total energy + Delta-G solvation = -4304.886864 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.146 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.77713 -41.31595 -40.40927 -39.17232 -38.37466 -37.59488 -37.44510 -34.70402 -32.75725 -32.23782 -32.09510 -31.16671 -29.34143 -26.68183 -26.65699 -26.11472 -24.87136 -23.65230 -22.78867 -22.61235 -21.82076 -20.74358 -19.53028 -18.96382 -18.33261 -18.07762 -17.45643 -17.28123 -17.11596 -16.88561 -16.65160 -16.36081 -16.03953 -15.85109 -15.58587 -15.43832 -15.15284 -15.09027 -15.01309 -14.83297 -14.44458 -14.18232 -14.16909 -14.01486 -13.78472 -13.71539 -13.50230 -13.37622 -13.04132 -12.96315 -12.79960 -12.52151 -12.48404 -12.10525 -11.87440 -11.75069 -11.67457 -11.67184 -11.21847 -11.00510 -10.52439 -10.14382 -9.95786 -9.90920 -9.66037 -9.19576 -4.94641 -0.19063 0.25471 0.37728 0.44053 1.29810 1.43515 1.49692 1.55049 1.56488 1.90903 1.94148 2.60976 2.72048 2.82716 2.85809 3.46533 3.49643 3.53493 3.71262 3.73011 3.76151 3.91526 3.93843 3.99377 4.00851 4.09396 4.15012 4.18811 4.20081 4.32943 4.33910 4.39299 4.51976 4.55569 4.67918 4.70615 4.78236 4.83742 4.89559 4.99973 5.01331 5.06313 5.08832 5.19055 5.30400 5.35048 5.39566 5.42242 5.50826 5.55256 5.67915 5.78218 5.89733 6.29997 6.39861 6.48291 6.53792 7.14183 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.277 3.723 3 C -0.046 4.046 4 C -0.076 4.076 5 C -0.118 4.118 6 C -0.084 4.084 7 C -0.075 4.075 8 C -0.064 4.064 9 H 0.117 0.883 10 C -0.124 4.124 11 C 0.110 3.890 12 H 0.081 0.919 13 N -0.692 5.692 14 C 0.515 3.485 15 O -0.570 6.570 16 C 0.036 3.964 17 O -0.313 6.313 18 C 0.130 3.870 19 C -0.164 4.164 20 C -0.082 4.082 21 O -0.549 6.549 22 Si 0.781 3.219 23 C -0.089 4.089 24 C -0.155 4.155 25 C -0.075 4.075 26 C -0.211 4.211 27 C -0.142 4.142 28 C -0.066 4.066 29 H 0.139 0.861 30 H 0.153 0.847 31 H 0.147 0.853 32 H 0.105 0.895 33 H 0.089 0.911 34 H 0.421 0.579 35 H 0.120 0.880 36 H 0.125 0.875 37 H 0.097 0.903 38 H 0.381 0.619 39 H -0.266 1.266 40 H -0.308 1.308 41 H 0.145 0.855 42 H 0.149 0.851 43 H 0.153 0.847 44 H 0.155 0.845 45 H 0.069 0.931 46 H 0.102 0.898 47 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.814 -4.211 0.926 4.678 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.038 4.038 3 C -0.049 4.049 4 C -0.097 4.097 5 C -0.136 4.136 6 C -0.103 4.103 7 C -0.075 4.075 8 C -0.082 4.082 9 H 0.135 0.865 10 C -0.161 4.161 11 C 0.005 3.995 12 H 0.099 0.901 13 N -0.346 5.346 14 C 0.301 3.699 15 O -0.448 6.448 16 C -0.042 4.042 17 O -0.225 6.225 18 C 0.084 3.916 19 C -0.165 4.165 20 C -0.189 4.189 21 O -0.356 6.356 22 Si 0.685 3.315 23 C -0.106 4.106 24 C -0.173 4.173 25 C -0.093 4.093 26 C -0.230 4.230 27 C -0.181 4.181 28 C -0.086 4.086 29 H 0.157 0.843 30 H 0.171 0.829 31 H 0.165 0.835 32 H 0.123 0.877 33 H 0.108 0.892 34 H 0.259 0.741 35 H 0.137 0.863 36 H 0.143 0.857 37 H 0.115 0.885 38 H 0.230 0.770 39 H -0.192 1.192 40 H -0.236 1.236 41 H 0.163 0.837 42 H 0.167 0.833 43 H 0.171 0.829 44 H 0.173 0.827 45 H 0.088 0.912 46 H 0.120 0.880 47 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -1.998 -3.383 1.150 4.094 hybrid contribution -0.151 -0.072 -1.321 1.332 sum -2.150 -3.455 -0.171 4.072 Atomic orbital electron populations 1.81320 1.13794 1.08940 1.10905 1.26154 0.93078 0.92332 0.92202 1.16103 0.82879 0.96570 1.09395 1.21406 0.95138 0.96639 0.96499 1.21372 0.93156 0.99687 0.99337 1.21594 1.01583 0.91699 0.95412 1.19690 0.92405 0.95652 0.99729 1.21615 0.94617 0.94830 0.97155 0.86536 1.23404 0.94278 1.02700 0.95764 1.21911 1.00198 0.80571 0.96811 0.90059 1.45342 1.12658 1.12656 1.63964 1.20514 0.84014 0.88329 0.77026 1.90780 1.28954 1.70121 1.54918 1.22718 0.86486 0.92256 1.02753 1.86189 1.33496 1.25649 1.77206 1.19057 0.94609 0.83174 0.94720 1.19705 0.94325 0.95997 1.06517 1.25192 0.98868 1.04752 0.90111 1.86650 1.83865 1.35903 1.29208 0.94056 0.75350 0.75678 0.86444 1.21184 1.00195 0.91717 0.97518 1.21397 0.92434 1.01347 1.02111 1.21399 0.99003 0.94319 0.94551 1.21595 0.97908 0.96166 1.07313 1.23583 0.95444 1.00302 0.98736 1.21215 0.94034 0.96718 0.96662 0.84297 0.82882 0.83499 0.87663 0.89212 0.74102 0.86251 0.85727 0.88497 0.77030 1.19168 1.23628 0.83734 0.83311 0.82914 0.82711 0.91247 0.87993 0.83955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.04 18.54 19.00 0.35 -4.69 16 2 C 0.28 1.15 15.33 88.33 1.35 2.50 16 3 C -0.05 0.10 5.73 -21.36 -0.12 -0.03 16 4 C -0.08 0.36 9.76 22.54 0.22 0.58 16 5 C -0.12 0.88 10.03 22.23 0.22 1.11 16 6 C -0.08 0.69 8.62 22.33 0.19 0.88 16 7 C -0.07 0.57 5.28 -19.90 -0.11 0.47 16 8 C -0.06 0.65 3.85 -11.01 -0.04 0.61 16 9 H 0.12 -1.52 8.09 -2.38 -0.02 -1.54 16 10 C -0.12 1.22 7.29 31.12 0.23 1.44 16 11 C 0.11 -0.55 4.32 45.52 0.20 -0.35 16 12 H 0.08 0.09 7.46 -2.39 -0.02 0.07 16 13 N -0.69 4.13 5.26 -440.04 -2.32 1.82 16 14 C 0.51 1.21 7.91 87.66 0.69 1.91 16 15 O -0.57 -8.42 16.10 16.01 0.26 -8.16 16 16 C 0.04 -0.10 5.22 71.24 0.37 0.27 16 17 O -0.31 -2.18 9.00 -73.34 -0.66 -2.84 16 18 C 0.13 0.49 6.66 22.51 0.15 0.64 16 19 C -0.16 -0.62 5.27 -19.77 -0.10 -0.73 16 20 C -0.08 -0.50 2.38 71.24 0.17 -0.33 16 21 O -0.55 -5.52 12.88 -148.98 -1.92 -7.44 16 22 Si 0.78 0.90 30.25 68.60 2.07 2.98 16 23 C -0.09 0.05 8.66 22.25 0.19 0.24 16 24 C -0.15 0.49 10.04 22.28 0.22 0.72 16 25 C -0.07 0.31 10.04 22.26 0.22 0.53 16 26 C -0.21 0.53 9.04 22.37 0.20 0.73 16 27 C -0.14 1.00 7.25 31.12 0.23 1.22 16 28 C -0.07 0.36 9.41 22.54 0.21 0.57 16 29 H 0.14 -0.90 8.06 -2.91 -0.02 -0.93 16 30 H 0.15 -1.73 8.06 -2.91 -0.02 -1.75 16 31 H 0.15 -1.66 6.63 -2.91 -0.02 -1.67 16 32 H 0.11 -1.07 7.73 -2.39 -0.02 -1.09 16 33 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 34 H 0.42 -5.73 8.70 -92.71 -0.81 -6.54 16 35 H 0.12 -1.03 7.66 -2.39 -0.02 -1.05 16 36 H 0.13 -1.19 7.66 -2.39 -0.02 -1.21 16 37 H 0.10 0.90 7.83 -2.39 -0.02 0.88 16 38 H 0.38 1.01 8.70 -74.05 -0.64 0.37 16 39 H -0.27 -0.50 6.68 99.48 0.66 0.17 16 40 H -0.31 -2.90 7.11 99.48 0.71 -2.19 16 41 H 0.15 -0.52 4.86 -2.91 -0.01 -0.54 16 42 H 0.15 -1.14 8.06 -2.91 -0.02 -1.16 16 43 H 0.15 -1.43 8.06 -2.91 -0.02 -1.46 16 44 H 0.16 -1.37 6.30 -2.91 -0.02 -1.39 16 45 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 46 H 0.10 -0.79 6.29 -2.39 -0.02 -0.81 16 47 H 0.14 -1.16 8.05 -2.91 -0.02 -1.19 16 Total: 0.00 -31.82 402.39 2.08 -29.74 By element: Atomic # 1 Polarization: -24.00 SS G_CDS: -0.41 Total: -24.41 kcal Atomic # 6 Polarization: 8.29 SS G_CDS: 4.70 Total: 13.00 kcal Atomic # 7 Polarization: -0.91 SS G_CDS: -1.96 Total: -2.87 kcal Atomic # 8 Polarization: -16.12 SS G_CDS: -2.32 Total: -18.44 kcal Atomic # 14 Polarization: 0.90 SS G_CDS: 2.07 Total: 2.98 kcal Total: -31.82 2.08 -29.74 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_2989392.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.511 kcal (2) G-P(sol) polarization free energy of solvation -31.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.081 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.742 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds