Wall clock time and date at job start Tue Mar 9 2021 12:54:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39608 * 120.14639 * 175.13798 * 3 2 1 5 5 C 1.37974 * 119.84372 * 179.97438 * 4 3 2 6 6 C 1.38342 * 120.14875 * 0.27850 * 5 4 3 7 7 C 1.38385 * 120.30524 * 359.44605 * 6 5 4 8 8 C 1.50701 * 119.92116 * 180.25592 * 7 6 5 9 9 H 1.09007 * 112.84614 * 169.09592 * 8 7 6 10 10 C 1.53781 * 113.61590 * 300.29322 * 8 7 6 11 11 C 1.53784 * 87.08057 * 139.98214 * 10 8 7 12 12 H 1.08992 * 113.61435 * 219.93662 * 11 10 8 13 13 N 1.46502 * 113.61357 * 89.11665 * 11 10 8 14 14 C 1.34770 * 120.00027 * 155.00166 * 13 11 10 15 15 O 1.21281 * 119.99832 * 359.97438 * 14 13 11 16 16 C 1.50697 * 119.99958 * 180.02562 * 14 13 11 17 17 F 1.39900 * 109.47006 * 299.99421 * 16 14 13 18 18 F 1.39902 * 109.47714 * 59.99446 * 16 14 13 19 19 O 1.42907 * 109.47339 * 179.97438 * 16 14 13 20 20 C 1.35892 * 117.00163 * 179.97438 * 19 16 14 21 21 C 1.38738 * 120.06000 * 359.72209 * 20 19 16 22 22 C 1.38140 * 119.94490 * 179.69761 * 21 20 19 23 23 C 1.38267 * 120.05520 * 0.60344 * 22 21 20 24 24 C 1.50708 * 119.94168 * 179.70056 * 23 22 21 25 25 O 1.42898 * 109.46659 * 244.97257 * 24 23 22 26 26 Si 1.86297 * 109.47262 * 4.97241 * 24 23 22 27 27 C 1.38260 * 120.11037 * 359.67061 * 23 22 21 28 28 C 1.38143 * 120.06037 * 0.02965 * 27 23 22 29 29 C 1.53778 * 113.61771 * 37.79404 * 8 7 6 30 30 C 1.37922 * 120.15281 * 0.55119 * 7 6 5 31 31 H 1.07999 * 120.08035 * 359.97438 * 4 3 2 32 32 H 1.08002 * 119.92160 * 179.97438 * 5 4 3 33 33 H 1.08005 * 119.84349 * 179.71729 * 6 5 4 34 34 H 1.09003 * 113.61448 * 254.53153 * 10 8 7 35 35 H 1.09001 * 113.61169 * 25.43703 * 10 8 7 36 36 H 0.97007 * 119.99995 * 334.99796 * 13 11 10 37 37 H 1.08000 * 120.01955 * 359.97438 * 21 20 19 38 38 H 1.08004 * 119.97233 * 180.27471 * 22 21 20 39 39 H 1.09002 * 109.47012 * 124.97618 * 24 23 22 40 40 H 0.96700 * 114.00175 * 60.00020 * 25 24 23 41 41 H 1.48496 * 110.00233 * 179.97438 * 26 24 23 42 42 H 1.48501 * 110.00081 * 301.32435 * 26 24 23 43 43 H 1.08010 * 119.96741 * 180.02562 * 27 23 22 44 44 H 1.07994 * 120.02908 * 179.97438 * 28 27 23 45 45 H 1.08999 * 113.61240 * 334.56333 * 29 8 7 46 46 H 1.08997 * 113.61807 * 105.46514 * 29 8 7 47 47 H 1.07996 * 120.07981 * 179.70730 * 30 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2686 1.2039 -0.1023 5 6 4.6484 1.1973 -0.1012 6 6 5.3374 0.0015 -0.0047 7 6 4.6492 -1.1943 0.1027 8 6 5.4086 -2.4913 0.2131 9 1 4.7706 -3.3338 0.4801 10 6 6.3280 -2.7710 -0.9875 11 6 7.3591 -3.2968 0.0250 12 1 8.3847 -3.0102 -0.2075 13 7 7.2198 -4.7259 0.3160 14 6 8.2829 -5.4323 0.7484 15 8 9.3551 -4.8850 0.8963 16 6 8.1397 -6.9024 1.0472 17 9 7.1828 -7.0831 2.0516 18 9 7.7343 -7.5762 -0.1099 19 8 9.3958 -7.4239 1.4861 20 6 9.4396 -8.7455 1.7992 21 6 8.2959 -9.5234 1.6919 22 6 8.3446 -10.8680 2.0049 23 6 9.5289 -11.4361 2.4367 24 6 9.5775 -12.9018 2.7838 25 8 9.8511 -13.0521 4.1783 26 14 7.9371 -13.6894 2.3844 27 6 10.6688 -10.6618 2.5499 28 6 10.6268 -9.3180 2.2323 29 6 6.6842 -2.3877 1.0656 30 6 3.2700 -1.2023 0.1028 31 1 2.7319 2.1376 -0.1822 32 1 5.1916 2.1273 -0.1807 33 1 6.4174 0.0017 -0.0089 34 1 5.9460 -3.5387 -1.6605 35 1 6.6496 -1.8702 -1.5103 36 1 6.3623 -5.1637 0.1974 37 1 7.3693 -9.0790 1.3597 38 1 7.4555 -11.4750 1.9172 39 1 10.3638 -13.3864 2.2050 40 1 9.1908 -12.6440 4.7549 41 1 7.9723 -15.1351 2.7216 42 1 6.8525 -13.0164 3.1432 43 1 11.5928 -11.1080 2.8870 44 1 11.5174 -8.7136 2.3213 45 1 7.1032 -1.3822 1.1040 46 1 6.5899 -2.8459 2.0500 47 1 2.7342 -2.1366 0.1820 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_4549640.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:06 Heat of formation + Delta-G solvation = -78.292508 kcal Electronic energy + Delta-G solvation = -35919.504046 eV Core-core repulsion = 30671.543700 eV Total energy + Delta-G solvation = -5247.960346 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.127 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -50.85870 -48.83444 -41.99096 -41.33940 -40.76052 -39.52032 -39.07605 -37.40090 -37.32689 -35.11223 -32.48005 -32.45270 -32.29303 -31.99223 -29.13453 -27.06344 -26.71501 -26.10354 -25.08370 -24.47048 -23.17532 -22.85776 -22.43978 -21.12463 -20.63059 -19.79214 -19.64722 -19.24125 -18.62904 -17.74528 -17.54124 -17.39208 -17.04803 -16.80865 -16.58221 -16.46180 -16.28622 -16.04805 -15.86502 -15.69452 -15.41510 -15.32332 -15.29667 -15.15593 -15.09558 -15.06521 -14.78150 -14.38217 -14.35159 -14.22767 -14.19396 -14.17081 -13.81864 -13.75361 -13.52099 -13.23316 -13.09906 -12.99806 -12.77885 -12.40347 -12.23866 -12.10723 -12.05044 -11.72267 -11.59348 -11.52649 -10.65003 -10.62352 -10.16779 -10.13836 -9.92427 -9.56183 -5.00768 -0.37042 0.05244 0.09925 0.17272 0.44438 0.65357 1.23245 1.54132 1.65109 1.71504 1.84841 1.91951 1.97808 2.47169 2.67523 2.70093 2.77464 3.08104 3.22487 3.32111 3.34305 3.40108 3.52774 3.56978 3.64071 3.66472 3.71537 3.82981 3.87178 4.02315 4.08948 4.19181 4.21319 4.29442 4.38942 4.41454 4.44887 4.46806 4.53443 4.64202 4.69450 4.73568 4.75997 4.81227 4.92221 5.04799 5.06688 5.10682 5.15948 5.32735 5.35554 5.39005 5.61108 5.70986 5.86642 6.35077 6.35711 6.45949 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.411 5.411 2 C 0.249 3.751 3 C -0.024 4.024 4 C -0.073 4.073 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.073 4.073 8 C -0.077 4.077 9 H 0.103 0.897 10 C -0.133 4.133 11 C 0.116 3.884 12 H 0.115 0.885 13 N -0.688 5.688 14 C 0.520 3.480 15 O -0.464 6.464 16 C 0.432 3.568 17 F -0.175 7.175 18 F -0.174 7.174 19 O -0.286 6.286 20 C 0.107 3.893 21 C -0.187 4.187 22 C -0.079 4.079 23 C -0.140 4.140 24 C -0.072 4.072 25 O -0.529 6.529 26 Si 0.683 3.317 27 C -0.055 4.055 28 C -0.126 4.126 29 C -0.143 4.143 30 C -0.066 4.066 31 H 0.133 0.867 32 H 0.136 0.864 33 H 0.133 0.867 34 H 0.083 0.917 35 H 0.107 0.893 36 H 0.411 0.589 37 H 0.136 0.864 38 H 0.135 0.865 39 H 0.120 0.880 40 H 0.376 0.624 41 H -0.255 1.255 42 H -0.260 1.260 43 H 0.140 0.860 44 H 0.141 0.859 45 H 0.103 0.897 46 H 0.080 0.920 47 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.533 1.545 -3.035 3.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.086 5.086 2 C -0.067 4.067 3 C -0.028 4.028 4 C -0.093 4.093 5 C -0.133 4.133 6 C -0.106 4.106 7 C -0.073 4.073 8 C -0.095 4.095 9 H 0.121 0.879 10 C -0.171 4.171 11 C 0.012 3.988 12 H 0.133 0.867 13 N -0.342 5.342 14 C 0.298 3.702 15 O -0.334 6.334 16 C 0.354 3.646 17 F -0.156 7.156 18 F -0.155 7.155 19 O -0.202 6.202 20 C 0.064 3.936 21 C -0.205 4.205 22 C -0.096 4.096 23 C -0.140 4.140 24 C -0.181 4.181 25 O -0.335 6.335 26 Si 0.585 3.415 27 C -0.073 4.073 28 C -0.144 4.144 29 C -0.181 4.181 30 C -0.087 4.087 31 H 0.151 0.849 32 H 0.154 0.846 33 H 0.150 0.850 34 H 0.101 0.899 35 H 0.125 0.875 36 H 0.247 0.753 37 H 0.153 0.847 38 H 0.152 0.848 39 H 0.138 0.862 40 H 0.224 0.776 41 H -0.180 1.180 42 H -0.185 1.185 43 H 0.158 0.842 44 H 0.159 0.841 45 H 0.122 0.878 46 H 0.099 0.901 47 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 0.507 1.315 -2.844 3.174 hybrid contribution -0.400 0.064 1.048 1.124 sum 0.107 1.379 -1.795 2.266 Atomic orbital electron populations 1.81317 1.12065 1.06872 1.08312 1.25740 0.92699 0.94154 0.94059 1.15987 0.84321 0.95067 1.07378 1.21258 0.94549 0.96775 0.96731 1.21138 0.93570 0.98722 0.99834 1.21300 1.00648 0.91693 0.96913 1.19534 0.92735 0.94836 1.00224 1.21669 0.95175 0.95187 0.97455 0.87924 1.23469 0.94992 1.02537 0.96100 1.22081 1.01737 0.78021 0.97011 0.86666 1.45458 1.12141 1.10241 1.66323 1.19285 0.85874 0.85187 0.79902 1.90882 1.25846 1.68528 1.48178 1.21806 0.76987 0.90784 0.75017 1.93196 1.64972 1.95981 1.61472 1.93201 1.90418 1.82146 1.49741 1.86669 1.29253 1.23966 1.80324 1.18985 0.95586 0.80984 0.98044 1.21463 0.97612 0.95434 1.05996 1.20853 0.97474 0.94098 0.97200 1.20309 0.94001 0.96870 1.02869 1.24983 1.13379 0.94886 0.84899 1.86610 1.51925 1.79857 1.15125 0.95000 0.74880 0.79606 0.92043 1.20905 0.98508 0.91934 0.95980 1.20539 0.96218 0.95339 1.02348 1.23610 0.94871 1.00959 0.98697 1.21079 0.93632 0.96820 0.97151 0.84866 0.84626 0.84963 0.89853 0.87504 0.75345 0.84656 0.84813 0.86194 0.77595 1.18029 1.18486 0.84247 0.84108 0.87830 0.90111 0.84981 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.82 18.54 41.84 0.78 -1.04 16 2 C 0.25 0.36 15.33 -22.47 -0.34 0.01 16 3 C -0.02 0.03 5.73 -106.93 -0.61 -0.58 16 4 C -0.07 0.19 9.76 -39.17 -0.38 -0.19 16 5 C -0.11 0.44 10.03 -39.64 -0.40 0.04 16 6 C -0.09 0.37 8.59 -39.49 -0.34 0.03 16 7 C -0.07 0.28 5.28 -104.68 -0.55 -0.27 16 8 C -0.08 0.39 3.85 -90.96 -0.35 0.04 16 9 H 0.10 -0.59 8.09 -51.93 -0.42 -1.01 16 10 C -0.13 0.72 7.29 -25.92 -0.19 0.53 16 11 C 0.12 -0.44 4.32 -67.12 -0.29 -0.73 16 12 H 0.12 -0.31 7.46 -51.93 -0.39 -0.70 16 13 N -0.69 2.06 5.26 -53.02 -0.28 1.78 16 14 C 0.52 0.25 7.34 -10.99 -0.08 0.17 16 15 O -0.46 -1.76 16.10 -14.35 -0.23 -1.99 16 16 C 0.43 0.32 2.05 36.00 0.07 0.40 16 17 F -0.17 -0.04 15.27 2.25 0.03 0.00 16 18 F -0.17 -0.01 15.31 2.25 0.03 0.03 16 19 O -0.29 -0.80 9.60 -39.31 -0.38 -1.18 16 20 C 0.11 0.22 6.48 -39.21 -0.25 -0.04 16 21 C -0.19 -0.18 8.26 -39.43 -0.33 -0.50 16 22 C -0.08 0.01 8.66 -39.61 -0.34 -0.33 16 23 C -0.14 0.01 5.35 -104.60 -0.56 -0.55 16 24 C -0.07 0.05 2.80 36.01 0.10 0.15 16 25 O -0.53 -0.44 12.83 -35.23 -0.45 -0.89 16 26 Si 0.68 -0.86 29.88 -169.99 -5.08 -5.94 16 27 C -0.06 -0.01 9.68 -39.61 -0.38 -0.39 16 28 C -0.13 -0.13 9.99 -39.43 -0.39 -0.53 16 29 C -0.14 0.63 7.25 -25.92 -0.19 0.45 16 30 C -0.07 0.18 9.41 -39.17 -0.37 -0.19 16 31 H 0.13 -0.48 8.06 -52.49 -0.42 -0.90 16 32 H 0.14 -0.74 8.06 -52.49 -0.42 -1.17 16 33 H 0.13 -0.79 6.66 -52.48 -0.35 -1.14 16 34 H 0.08 -0.47 8.14 -51.93 -0.42 -0.89 16 35 H 0.11 -0.63 7.71 -51.93 -0.40 -1.03 16 36 H 0.41 -2.17 8.70 -40.82 -0.36 -2.52 16 37 H 0.14 0.01 5.10 -52.49 -0.27 -0.26 16 38 H 0.13 -0.26 4.83 -52.48 -0.25 -0.51 16 39 H 0.12 -0.18 7.96 -51.93 -0.41 -0.60 16 40 H 0.38 -0.70 8.70 45.56 0.40 -0.30 16 41 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 42 H -0.26 -0.16 7.01 56.52 0.40 0.24 16 43 H 0.14 -0.14 8.06 -52.48 -0.42 -0.56 16 44 H 0.14 -0.01 8.06 -52.49 -0.42 -0.43 16 45 H 0.10 -0.54 6.32 -51.93 -0.33 -0.86 16 46 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 47 H 0.13 -0.50 8.05 -52.49 -0.42 -0.93 16 LS Contribution 412.48 15.07 6.22 6.22 Total: 0.00 -9.46 412.48 -10.48 -19.94 By element: Atomic # 1 Polarization: -9.46 SS G_CDS: -4.94 Total: -14.41 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: -6.18 Total: -2.51 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: 0.50 Total: 0.74 kcal Atomic # 8 Polarization: -3.01 SS G_CDS: -1.06 Total: -4.07 kcal Atomic # 9 Polarization: -0.05 SS G_CDS: 0.07 Total: 0.02 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.08 Total: -5.94 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -9.46 -10.48 -19.94 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_4549640.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.355 kcal (2) G-P(sol) polarization free energy of solvation -9.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.481 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.293 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds