Wall clock time and date at job start Tue Mar 9 2021 12:55:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43206 * 179.97438 * 2 1 4 4 C 1.39609 * 120.15102 * 66.73096 * 3 2 1 5 5 C 1.37969 * 119.84605 * 180.02562 * 4 3 2 6 6 C 1.38341 * 120.14668 * 359.74892 * 5 4 3 7 7 C 1.38380 * 120.30830 * 0.50970 * 6 5 4 8 8 C 1.50701 * 119.92557 * 179.76250 * 7 6 5 9 9 H 1.09002 * 112.85047 * 170.05973 * 8 7 6 10 10 C 1.53781 * 113.61772 * 301.25688 * 8 7 6 11 11 C 1.53777 * 87.08336 * 140.06093 * 10 8 7 12 12 H 1.08998 * 113.61354 * 219.93545 * 11 10 8 13 13 N 1.46500 * 113.61088 * 89.11940 * 11 10 8 14 14 C 1.34772 * 120.00149 * 155.00452 * 13 11 10 15 15 O 1.21280 * 119.99925 * 359.97438 * 14 13 11 16 16 C 1.50696 * 120.00417 * 179.97438 * 14 13 11 17 17 N 1.46497 * 109.47413 * 179.97438 * 16 14 13 18 18 C 1.36837 * 125.06242 * 265.02223 * 17 16 14 19 19 C 1.34239 * 109.93684 * 180.02562 * 18 17 16 20 20 C 1.50701 * 126.50120 * 180.02562 * 19 18 17 21 21 O 1.42891 * 109.47056 * 254.97203 * 20 19 18 22 22 Si 1.86304 * 109.46903 * 14.97527 * 20 19 18 23 23 C 1.46497 * 106.99954 * 0.02562 * 19 18 17 24 24 C 1.39586 * 134.03685 * 180.02562 * 23 19 18 25 25 C 1.36670 * 119.76154 * 179.23475 * 24 23 19 26 26 C 1.38789 * 120.52837 * 0.66207 * 25 24 23 27 27 C 1.37786 * 120.66482 * 359.57258 * 26 25 24 28 28 C 1.37693 * 125.06188 * 84.72264 * 17 16 14 29 29 C 1.53775 * 87.07992 * 334.56762 * 11 10 8 30 30 C 1.37928 * 120.15057 * 359.48854 * 7 6 5 31 31 H 1.08001 * 120.07839 * 0.04696 * 4 3 2 32 32 H 1.08001 * 119.92522 * 180.02562 * 5 4 3 33 33 H 1.08005 * 119.84384 * 180.25654 * 6 5 4 34 34 H 1.08997 * 113.61673 * 254.61641 * 10 8 7 35 35 H 1.09005 * 113.61396 * 25.51470 * 10 8 7 36 36 H 0.96999 * 119.99703 * 334.99353 * 13 11 10 37 37 H 1.08996 * 109.47225 * 299.99701 * 16 14 13 38 38 H 1.08999 * 109.47102 * 59.99481 * 16 14 13 39 39 H 1.07993 * 125.03242 * 0.02586 * 18 17 16 40 40 H 1.09003 * 109.47229 * 134.97190 * 20 19 18 41 41 H 0.96705 * 114.00089 * 60.00542 * 21 20 19 42 42 H 1.48493 * 109.99837 * 180.02562 * 22 20 19 43 43 H 1.48501 * 109.99899 * 301.31877 * 22 20 19 44 44 H 1.08004 * 120.11691 * 359.97438 * 24 23 19 45 45 H 1.08000 * 119.73230 * 180.20655 * 25 24 23 46 46 H 1.07994 * 119.66422 * 179.59798 * 26 25 24 47 47 H 1.07998 * 120.10865 * 179.97438 * 27 26 25 48 48 H 1.08993 * 113.61636 * 270.87622 * 29 11 10 49 49 H 1.09008 * 113.61006 * 139.97865 * 29 11 10 50 50 H 1.08001 * 120.07402 * 180.27470 * 30 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2695 -0.4760 -1.1090 5 6 4.6492 -0.4729 -1.1021 6 6 5.3373 0.0058 -0.0015 7 6 4.6484 0.4747 1.1032 8 6 5.4068 0.9892 2.2995 9 1 4.7642 1.4856 3.0266 10 6 6.3536 -0.0502 2.9224 11 6 7.3614 1.0960 3.1101 12 1 8.3920 0.8101 2.8999 13 7 7.2159 1.8024 4.3853 14 6 8.2690 2.4513 4.9203 15 8 9.3373 2.4501 4.3462 16 6 8.1192 3.1784 6.2317 17 7 9.3963 3.7967 6.5960 18 6 10.3341 3.2365 7.4201 19 6 11.3847 4.0626 7.5462 20 6 12.6257 3.8161 8.3648 21 8 12.5792 4.6107 9.5515 22 14 12.7166 2.0137 8.8275 23 6 11.0959 5.2492 6.7372 24 6 11.7865 6.4323 6.4690 25 6 11.2363 7.3649 5.6351 26 6 9.9898 7.1514 5.0634 27 6 9.2888 5.9930 5.3184 28 6 9.8344 5.0255 6.1555 29 6 6.6626 1.7979 1.9338 30 6 3.2691 0.4775 1.1096 31 1 2.7334 -0.8458 -1.9705 32 1 5.1931 -0.8409 -1.9595 33 1 6.4174 0.0097 -0.0030 34 1 5.9874 -0.4677 3.8603 35 1 6.6869 -0.8139 2.2196 36 1 6.3614 1.8031 4.8445 37 1 7.3562 3.9506 6.1339 38 1 7.8237 2.4718 7.0072 39 1 10.2426 2.2725 7.8983 40 1 13.5057 4.0861 7.7810 41 1 11.8201 4.4236 10.1207 42 1 13.9358 1.7576 9.6355 43 1 11.5071 1.6252 9.5966 44 1 12.7576 6.6047 6.9093 45 1 11.7726 8.2786 5.4253 46 1 9.5653 7.9007 4.4117 47 1 8.3193 5.8364 4.8691 48 1 7.0804 1.5397 0.9608 49 1 6.5459 2.8727 2.0737 50 1 2.7327 0.8478 1.9707 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:00 Heat of formation + Delta-G solvation = 91.027653 kcal Electronic energy + Delta-G solvation = -33688.324728 eV Core-core repulsion = 29227.880988 eV Total energy + Delta-G solvation = -4460.443740 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.157 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.53076 -41.76345 -40.54738 -39.20615 -38.04569 -37.60370 -37.34645 -34.83899 -34.03065 -32.45914 -32.25021 -31.29351 -30.14496 -29.01328 -26.97959 -26.57504 -25.66207 -24.97536 -23.69562 -23.11094 -22.72544 -21.90468 -20.94562 -20.59959 -19.24477 -18.68606 -18.49482 -17.72327 -17.54180 -17.39131 -17.04468 -16.62873 -16.42486 -16.31189 -16.13163 -15.94018 -15.55608 -15.39466 -15.24183 -15.10495 -14.85422 -14.65107 -14.61645 -14.34073 -14.22149 -14.18036 -14.01386 -13.79693 -13.75507 -13.60801 -13.36007 -13.07432 -13.04633 -12.75110 -12.61543 -12.47620 -12.30126 -12.06202 -11.95170 -11.89919 -11.64508 -11.49932 -11.15776 -10.44782 -10.36938 -10.31359 -10.13231 -9.90366 -9.04579 -8.55614 -4.88252 -0.36479 0.10851 0.25727 0.77453 1.32060 1.36327 1.38304 1.60305 1.64648 1.67800 1.85247 2.01307 2.03599 2.70754 2.77567 3.09139 3.18591 3.35221 3.40780 3.44285 3.50962 3.57342 3.62979 3.70567 3.71151 3.77525 3.83823 3.86019 3.89549 4.03795 4.04294 4.25096 4.29865 4.35034 4.41160 4.47872 4.52146 4.57840 4.60346 4.69811 4.70655 4.76225 4.78235 4.79292 4.87281 4.88641 4.97813 5.11274 5.15177 5.23767 5.25889 5.39335 5.61999 5.62862 5.78842 5.84360 5.88181 6.10011 6.27552 6.34151 6.45479 6.58096 6.94463 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.411 5.411 2 C 0.249 3.751 3 C -0.025 4.025 4 C -0.073 4.073 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.073 4.073 8 C -0.075 4.075 9 H 0.100 0.900 10 C -0.135 4.135 11 C 0.120 3.880 12 H 0.107 0.893 13 N -0.712 5.712 14 C 0.494 3.506 15 O -0.508 6.508 16 C 0.091 3.909 17 N -0.466 5.466 18 C 0.066 3.934 19 C -0.192 4.192 20 C -0.037 4.037 21 O -0.531 6.531 22 Si 0.682 3.318 23 C -0.086 4.086 24 C -0.065 4.065 25 C -0.145 4.145 26 C -0.096 4.096 27 C -0.128 4.128 28 C 0.109 3.891 29 C -0.143 4.143 30 C -0.067 4.067 31 H 0.133 0.867 32 H 0.136 0.864 33 H 0.132 0.868 34 H 0.079 0.921 35 H 0.101 0.899 36 H 0.402 0.598 37 H 0.118 0.882 38 H 0.122 0.878 39 H 0.168 0.832 40 H 0.114 0.886 41 H 0.372 0.628 42 H -0.256 1.256 43 H -0.261 1.261 44 H 0.123 0.877 45 H 0.123 0.877 46 H 0.125 0.875 47 H 0.114 0.886 48 H 0.097 0.903 49 H 0.076 0.924 50 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.554 -3.018 -0.768 3.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.086 5.086 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.073 4.073 8 C -0.093 4.093 9 H 0.118 0.882 10 C -0.173 4.173 11 C 0.014 3.986 12 H 0.125 0.875 13 N -0.365 5.365 14 C 0.278 3.722 15 O -0.382 6.382 16 C -0.035 4.035 17 N -0.149 5.149 18 C -0.059 4.059 19 C -0.200 4.200 20 C -0.148 4.148 21 O -0.337 6.337 22 Si 0.584 3.416 23 C -0.090 4.090 24 C -0.083 4.083 25 C -0.165 4.165 26 C -0.115 4.115 27 C -0.148 4.148 28 C 0.005 3.995 29 C -0.182 4.182 30 C -0.088 4.088 31 H 0.151 0.849 32 H 0.154 0.846 33 H 0.150 0.850 34 H 0.097 0.903 35 H 0.119 0.881 36 H 0.237 0.763 37 H 0.136 0.864 38 H 0.140 0.860 39 H 0.185 0.815 40 H 0.132 0.868 41 H 0.220 0.780 42 H -0.180 1.180 43 H -0.185 1.185 44 H 0.141 0.859 45 H 0.141 0.859 46 H 0.143 0.857 47 H 0.132 0.868 48 H 0.116 0.884 49 H 0.094 0.906 50 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.232 -3.518 -0.837 3.821 hybrid contribution -0.918 0.617 0.794 1.361 sum -2.150 -2.902 -0.043 3.612 Atomic orbital electron populations 1.81315 1.12064 1.08132 1.07115 1.25745 0.92701 0.94050 0.94119 1.15987 0.84306 1.05569 0.96943 1.21251 0.94532 0.96810 0.96776 1.21140 0.93581 0.99626 0.98928 1.21301 1.00653 0.96078 0.92501 1.19577 0.92724 0.99296 0.95703 1.21631 0.95105 0.97484 0.95065 0.88168 1.23445 0.95421 0.96434 1.01983 1.21865 1.00890 0.92673 0.83156 0.87460 1.45629 1.13543 1.54018 1.23350 1.21002 0.84480 0.79537 0.87174 1.90820 1.26507 1.59111 1.61714 1.21581 0.86215 0.99569 0.96133 1.43199 1.15824 1.14996 1.40907 1.21578 0.89152 0.98703 0.96464 1.20587 0.97854 0.95615 1.05948 1.24284 0.97088 1.06862 0.86518 1.86607 1.50738 1.62651 1.33686 0.95047 0.80459 0.77787 0.88354 1.18937 0.94294 0.95447 1.00345 1.20313 0.99295 0.91823 0.96884 1.20678 0.96387 0.99973 0.99416 1.20827 0.94860 0.96327 0.99518 1.19945 1.00670 0.93685 1.00536 1.18166 0.95015 0.86803 0.99536 1.23574 0.95021 1.00414 0.99154 1.21072 0.93642 0.97232 0.96829 0.84876 0.84638 0.85019 0.90261 0.88071 0.76312 0.86429 0.85981 0.81457 0.86777 0.78035 1.18026 1.18549 0.85907 0.85921 0.85737 0.86775 0.88417 0.90550 0.85050 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.81 18.54 41.84 0.78 -1.03 16 2 C 0.25 0.36 15.33 -22.47 -0.34 0.01 16 3 C -0.02 0.03 5.73 -106.93 -0.61 -0.58 16 4 C -0.07 0.18 9.76 -39.17 -0.38 -0.20 16 5 C -0.11 0.40 10.03 -39.64 -0.40 0.01 16 6 C -0.09 0.33 8.55 -39.49 -0.34 -0.01 16 7 C -0.07 0.26 5.29 -104.68 -0.55 -0.29 16 8 C -0.07 0.37 3.85 -90.96 -0.35 0.02 16 9 H 0.10 -0.59 8.08 -51.93 -0.42 -1.01 16 10 C -0.13 0.70 7.29 -25.92 -0.19 0.51 16 11 C 0.12 -0.44 4.32 -67.12 -0.29 -0.73 16 12 H 0.11 -0.17 7.46 -51.93 -0.39 -0.56 16 13 N -0.71 3.08 5.26 -53.03 -0.28 2.80 16 14 C 0.49 -0.68 7.90 -10.99 -0.09 -0.77 16 15 O -0.51 -1.83 16.02 5.56 0.09 -1.74 16 16 C 0.09 -0.30 6.48 -5.20 -0.03 -0.34 16 17 N -0.47 -0.27 2.27 -115.72 -0.26 -0.53 16 18 C 0.07 0.03 9.89 -16.73 -0.17 -0.14 16 19 C -0.19 -0.38 5.58 -102.71 -0.57 -0.96 16 20 C -0.04 -0.04 3.06 36.01 0.11 0.07 16 21 O -0.53 -1.24 12.88 -35.23 -0.45 -1.69 16 22 Si 0.68 -0.31 30.82 -169.99 -5.24 -5.55 16 23 C -0.09 -0.32 6.35 -105.14 -0.67 -0.98 16 24 C -0.06 -0.21 10.05 -39.65 -0.40 -0.61 16 25 C -0.15 -0.32 9.97 -39.94 -0.40 -0.72 16 26 C -0.10 -0.17 10.01 -39.54 -0.40 -0.57 16 27 C -0.13 -0.26 10.00 -39.43 -0.39 -0.65 16 28 C 0.11 0.31 6.79 -83.99 -0.57 -0.26 16 29 C -0.14 0.57 7.25 -25.92 -0.19 0.38 16 30 C -0.07 0.18 9.41 -39.17 -0.37 -0.19 16 31 H 0.13 -0.46 8.06 -52.49 -0.42 -0.89 16 32 H 0.14 -0.71 8.06 -52.49 -0.42 -1.13 16 33 H 0.13 -0.70 6.70 -52.48 -0.35 -1.05 16 34 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 35 H 0.10 -0.53 7.65 -51.93 -0.40 -0.92 16 36 H 0.40 -2.90 8.70 -40.82 -0.36 -3.26 16 37 H 0.12 -0.63 8.14 -51.93 -0.42 -1.05 16 38 H 0.12 -0.79 8.12 -51.93 -0.42 -1.21 16 39 H 0.17 -0.37 6.27 -52.49 -0.33 -0.70 16 40 H 0.11 0.12 7.96 -51.93 -0.41 -0.30 16 41 H 0.37 -0.27 8.70 45.56 0.40 0.13 16 42 H -0.26 -0.71 7.11 56.52 0.40 -0.30 16 43 H -0.26 -0.11 7.00 56.52 0.40 0.29 16 44 H 0.12 0.29 8.06 -52.48 -0.42 -0.14 16 45 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 46 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 47 H 0.11 0.00 8.06 -52.49 -0.42 -0.42 16 48 H 0.10 -0.41 6.38 -51.93 -0.33 -0.74 16 49 H 0.08 -0.22 8.14 -51.92 -0.42 -0.65 16 50 H 0.13 -0.50 8.05 -52.49 -0.42 -0.92 16 LS Contribution 429.63 15.07 6.47 6.47 Total: 0.00 -11.87 429.63 -12.93 -24.79 By element: Atomic # 1 Polarization: -10.08 SS G_CDS: -6.44 Total: -16.52 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -7.59 Total: -7.00 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: 0.23 Total: 1.23 kcal Atomic # 8 Polarization: -3.07 SS G_CDS: -0.36 Total: -3.43 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: -5.24 Total: -5.55 kcal Total LS contribution 6.47 Total: 6.47 kcal Total: -11.87 -12.93 -24.79 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.822 kcal (2) G-P(sol) polarization free energy of solvation -11.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 103.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.794 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds