Wall clock time and date at job start Tue Mar 9 2021 12:57:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37867 * 126.45650 * 2 1 4 4 C 1.46683 * 126.23224 * 359.97438 * 3 2 1 5 5 O 1.21690 * 120.00413 * 359.97438 * 4 3 2 6 6 N 1.34782 * 119.99856 * 179.97438 * 4 3 2 7 7 C 1.46493 * 120.00048 * 179.97438 * 6 4 3 8 8 C 1.52998 * 109.47217 * 180.02562 * 7 6 4 9 9 C 1.52997 * 109.47274 * 180.02562 * 8 7 6 10 10 H 1.09004 * 112.84915 * 45.32959 * 9 8 7 11 11 C 1.53775 * 113.61861 * 176.53244 * 9 8 7 12 12 C 1.53780 * 87.08512 * 139.97973 * 11 9 8 13 13 H 1.09001 * 113.60953 * 220.01550 * 12 11 9 14 14 F 1.39896 * 113.61257 * 89.11790 * 12 11 9 15 15 C 1.53784 * 113.61552 * 274.13958 * 9 8 7 16 16 N 1.37652 * 107.53548 * 179.97438 * 3 2 1 17 17 C 1.35533 * 108.64151 * 0.02562 * 16 3 2 18 18 C 1.50696 * 125.56318 * 179.97438 * 17 16 3 19 19 O 1.42902 * 109.46974 * 245.02074 * 18 17 16 20 20 Si 1.86299 * 109.47489 * 5.01977 * 18 17 16 21 21 C 1.35450 * 108.87160 * 359.72356 * 17 16 3 22 22 H 1.09001 * 109.46953 * 89.99965 * 1 2 3 23 23 H 1.09000 * 109.47318 * 209.99562 * 1 2 3 24 24 H 1.09000 * 109.47161 * 330.00193 * 1 2 3 25 25 H 0.97004 * 119.99960 * 359.97438 * 6 4 3 26 26 H 1.09005 * 109.47502 * 300.00437 * 7 6 4 27 27 H 1.08999 * 109.47008 * 60.00053 * 7 6 4 28 28 H 1.08997 * 109.47259 * 299.99921 * 8 7 6 29 29 H 1.08999 * 109.47089 * 60.00102 * 8 7 6 30 30 H 1.09000 * 113.61602 * 254.53329 * 11 9 8 31 31 H 1.09006 * 113.61620 * 25.42787 * 11 9 8 32 32 H 1.09005 * 113.61464 * 334.56426 * 15 9 8 33 33 H 1.09000 * 113.61829 * 105.47027 * 15 9 8 34 34 H 0.96999 * 125.67932 * 179.97438 * 16 3 2 35 35 H 1.08998 * 109.47425 * 125.02434 * 18 17 16 36 36 H 0.96698 * 114.00257 * 179.97438 * 19 18 17 37 37 H 1.48500 * 109.99972 * 300.00739 * 20 18 17 38 38 H 1.48505 * 109.99516 * 61.31888 * 20 18 17 39 39 H 1.08007 * 126.07018 * 180.26576 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5093 -0.0005 5 8 0.7027 2.7766 -0.0015 6 7 2.8037 3.5000 0.0001 7 6 2.3678 4.8985 -0.0010 8 6 3.5932 5.8146 -0.0007 9 6 3.1380 7.2753 -0.0012 10 1 2.3376 7.4695 0.7128 11 6 4.2974 8.2820 0.0843 12 6 3.5262 9.1372 -0.9349 13 1 4.1640 9.5997 -1.6881 14 9 2.6344 10.0408 -0.3473 15 6 2.8582 7.8329 -1.4068 16 7 3.6284 0.6625 0.0006 17 6 3.6218 -0.6928 0.0004 18 6 4.8434 -1.5752 0.0003 19 8 4.8964 -2.3151 -1.2211 20 14 6.3714 -0.5206 0.1542 21 6 2.3380 -1.1247 0.0058 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8900 0.5138 24 1 -0.3633 0.8900 0.5138 25 1 3.7500 3.2868 0.0012 26 1 1.7701 5.0922 -0.8917 27 1 1.7682 5.0929 0.8882 28 1 4.1913 5.6212 0.8898 29 1 4.1925 5.6202 -0.8902 30 1 4.3963 8.7520 1.0628 31 1 5.2418 7.8938 -0.2972 32 1 3.4084 7.3217 -2.1969 33 1 1.7969 7.9410 -1.6305 34 1 4.4191 1.2244 0.0004 35 1 4.7926 -2.2662 0.8417 36 1 5.6591 -2.9055 -1.2906 37 1 6.4523 0.4260 -0.9871 38 1 6.3435 0.2299 1.4354 39 1 2.0136 -2.1549 0.0111 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_13940406.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:21 Heat of formation + Delta-G solvation = -53.788982 kcal Electronic energy + Delta-G solvation = -21856.644625 eV Core-core repulsion = 18295.465983 eV Total energy + Delta-G solvation = -3561.178642 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.64461 -42.59731 -40.34377 -39.43194 -37.79564 -36.22467 -33.68355 -32.40875 -31.10929 -28.30339 -27.33763 -26.98580 -25.55598 -23.13776 -22.34148 -21.53626 -20.66480 -20.31790 -19.52693 -18.62979 -17.45182 -17.09164 -16.88616 -16.68914 -16.53613 -16.12120 -15.85396 -15.67240 -15.27892 -14.95001 -14.90384 -14.50384 -14.29607 -14.01827 -13.76093 -13.68271 -13.54359 -13.38902 -13.24342 -12.96863 -12.70347 -12.49376 -12.21300 -12.17435 -11.98053 -11.37080 -11.26487 -10.91606 -10.56353 -10.25023 -9.78754 -9.14642 -5.38510 0.32601 0.91700 1.27998 1.54919 1.60138 1.82759 2.00659 2.36994 3.10382 3.14799 3.24394 3.40899 3.50617 3.65846 3.67015 3.73805 3.93381 4.06636 4.13761 4.23508 4.26711 4.32738 4.38945 4.46464 4.59148 4.63382 4.74468 4.78365 4.85077 4.91051 4.93582 4.96445 5.05243 5.20757 5.27392 5.30627 5.48264 5.68319 5.92976 6.13582 6.37297 6.44856 7.11895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C -0.066 4.066 3 C -0.054 4.054 4 C 0.590 3.410 5 O -0.518 6.518 6 N -0.736 5.736 7 C 0.120 3.880 8 C -0.122 4.122 9 C -0.107 4.107 10 H 0.100 0.900 11 C -0.157 4.157 12 C 0.062 3.938 13 H 0.097 0.903 14 F -0.196 7.196 15 C -0.160 4.160 16 N -0.542 5.542 17 C 0.058 3.942 18 C -0.045 4.045 19 O -0.541 6.541 20 Si 0.682 3.318 21 C -0.167 4.167 22 H 0.070 0.930 23 H 0.066 0.934 24 H 0.081 0.919 25 H 0.392 0.608 26 H 0.073 0.927 27 H 0.073 0.927 28 H 0.073 0.927 29 H 0.072 0.928 30 H 0.082 0.918 31 H 0.099 0.901 32 H 0.099 0.901 33 H 0.083 0.917 34 H 0.406 0.594 35 H 0.090 0.910 36 H 0.386 0.614 37 H -0.250 1.250 38 H -0.250 1.250 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.923 -2.818 0.337 8.416 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.075 4.075 3 C -0.166 4.166 4 C 0.378 3.622 5 O -0.394 6.394 6 N -0.388 5.388 7 C -0.003 4.003 8 C -0.160 4.160 9 C -0.125 4.125 10 H 0.118 0.882 11 C -0.195 4.195 12 C 0.026 3.974 13 H 0.115 0.885 14 F -0.177 7.177 15 C -0.198 4.198 16 N -0.143 5.143 17 C -0.058 4.058 18 C -0.157 4.157 19 O -0.347 6.347 20 Si 0.582 3.418 21 C -0.192 4.192 22 H 0.089 0.911 23 H 0.084 0.916 24 H 0.100 0.900 25 H 0.225 0.775 26 H 0.091 0.909 27 H 0.091 0.909 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.101 0.899 31 H 0.118 0.882 32 H 0.118 0.882 33 H 0.102 0.898 34 H 0.245 0.755 35 H 0.108 0.892 36 H 0.234 0.766 37 H -0.174 1.174 38 H -0.174 1.174 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 6.898 -1.284 0.318 7.024 hybrid contribution 0.524 0.048 0.092 0.535 sum 7.423 -1.236 0.410 7.536 Atomic orbital electron populations 1.20396 0.88670 1.03233 1.02618 1.20054 0.96142 0.90422 1.00863 1.20193 0.83095 0.93640 1.19647 1.16995 0.85861 0.82874 0.76452 1.90846 1.15769 1.83101 1.49638 1.45922 1.09166 1.06789 1.76929 1.21410 0.97022 0.78678 1.03151 1.21785 0.97294 0.93891 1.02991 1.22506 0.98847 0.93187 0.98004 0.88167 1.23610 0.98359 0.96911 1.00636 1.22405 0.90692 0.88194 0.96145 0.88518 1.92830 1.70103 1.69051 1.85733 1.23719 1.02855 0.95638 0.97562 1.42016 1.07073 1.06392 1.58777 1.19542 0.95917 0.82029 1.08277 1.24023 1.01742 0.99165 0.90748 1.86523 1.51466 1.60370 1.36345 0.94431 0.83877 0.82942 0.80504 1.20635 0.90263 0.99197 1.09093 0.91142 0.91552 0.90011 0.77548 0.90852 0.90908 0.90836 0.90914 0.89927 0.88236 0.88223 0.89843 0.75500 0.89246 0.76581 1.17399 1.17428 0.83301 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.29 9.83 36.01 0.35 0.07 16 2 C -0.07 -0.26 6.21 -104.16 -0.65 -0.91 16 3 C -0.05 -0.19 7.06 -81.98 -0.58 -0.77 16 4 C 0.59 2.27 7.79 -12.85 -0.10 2.17 16 5 O -0.52 -3.59 14.80 5.20 0.08 -3.51 16 6 N -0.74 -0.34 5.55 -61.62 -0.34 -0.68 16 7 C 0.12 -0.03 5.67 -4.05 -0.02 -0.05 16 8 C -0.12 0.32 5.15 -26.73 -0.14 0.18 16 9 C -0.11 0.19 3.62 -89.81 -0.32 -0.14 16 10 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 11 C -0.16 0.32 7.54 -25.92 -0.20 0.13 16 12 C 0.06 -0.05 5.70 -25.83 -0.15 -0.19 16 13 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 14 F -0.20 -0.53 17.38 2.25 0.04 -0.49 16 15 C -0.16 0.26 7.54 -25.83 -0.19 0.06 16 16 N -0.54 -0.77 5.47 -5.70 -0.03 -0.81 16 17 C 0.06 0.10 6.13 -81.95 -0.50 -0.40 16 18 C -0.04 0.07 2.98 36.00 0.11 0.17 16 19 O -0.54 0.57 12.86 -35.23 -0.45 0.11 16 20 Si 0.68 -2.22 30.98 -169.99 -5.27 -7.49 16 21 C -0.17 -0.47 10.66 -39.98 -0.43 -0.90 16 22 H 0.07 0.21 8.14 -51.93 -0.42 -0.22 16 23 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 24 H 0.08 0.37 6.49 -51.93 -0.34 0.03 16 25 H 0.39 -0.79 7.60 -40.82 -0.31 -1.10 16 26 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 27 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 28 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 29 H 0.07 -0.24 7.88 -51.93 -0.41 -0.65 16 30 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 32 H 0.10 -0.29 7.92 -51.93 -0.41 -0.70 16 33 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.41 -0.34 6.00 -40.82 -0.24 -0.58 16 35 H 0.09 -0.29 7.96 -51.93 -0.41 -0.71 16 36 H 0.39 -2.43 8.74 45.56 0.40 -2.04 16 37 H -0.25 0.16 7.11 56.52 0.40 0.56 16 38 H -0.25 0.29 7.11 56.52 0.40 0.69 16 39 H 0.15 0.21 8.06 -52.48 -0.42 -0.21 16 LS Contribution 329.12 15.07 4.96 4.96 Total: 0.00 -8.64 329.12 -9.40 -18.04 By element: Atomic # 1 Polarization: -3.99 SS G_CDS: -5.57 Total: -9.57 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -2.82 Total: -0.57 kcal Atomic # 7 Polarization: -1.11 SS G_CDS: -0.37 Total: -1.49 kcal Atomic # 8 Polarization: -3.02 SS G_CDS: -0.38 Total: -3.40 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: -5.27 Total: -7.49 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -8.64 -9.40 -18.04 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_13940406.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.745 kcal (2) G-P(sol) polarization free energy of solvation -8.640 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.385 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.044 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds