Wall clock time and date at job start Tue Mar 9 2021 12:57:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42911 * 1 3 3 Si 1.86298 * 109.46937 * 2 1 4 4 C 1.50703 * 109.46807 * 120.00070 * 2 1 3 5 5 C 1.34850 * 125.88970 * 245.04331 * 4 2 1 6 6 C 1.40891 * 107.42017 * 179.73816 * 5 4 2 7 7 C 1.34855 * 107.41114 * 0.37169 * 6 5 4 8 8 C 1.50698 * 125.88468 * 179.88789 * 7 6 5 9 9 C 1.50706 * 109.47294 * 274.69085 * 8 7 6 10 10 O 1.21279 * 119.99507 * 0.02562 * 9 8 7 11 11 N 1.34774 * 120.00020 * 180.02562 * 9 8 7 12 12 C 1.46496 * 119.99544 * 180.02562 * 11 9 8 13 13 C 1.53005 * 109.47059 * 180.02562 * 12 11 9 14 14 C 1.52996 * 109.47571 * 180.02562 * 13 12 11 15 15 H 1.09009 * 112.84387 * 314.66269 * 14 13 12 16 16 C 1.53773 * 113.61836 * 85.85632 * 14 13 12 17 17 C 1.53960 * 87.02019 * 139.95527 * 16 14 13 18 18 H 1.08999 * 113.74400 * 220.06251 * 17 16 14 19 19 F 1.39898 * 113.53528 * 89.18888 * 17 16 14 20 20 C 1.53782 * 113.61762 * 183.47263 * 14 13 12 21 21 N 1.36333 * 125.89321 * 64.99975 * 4 2 1 22 22 H 0.96700 * 113.99598 * 300.00213 * 1 2 3 23 23 H 1.08996 * 109.47162 * 239.99527 * 2 1 3 24 24 H 1.48496 * 109.99724 * 178.67868 * 3 2 1 25 25 H 1.48495 * 110.00014 * 299.99774 * 3 2 1 26 26 H 1.08006 * 126.29102 * 359.93987 * 5 4 2 27 27 H 1.07990 * 126.29517 * 180.24084 * 6 5 4 28 28 H 1.09001 * 109.46665 * 154.69466 * 8 7 6 29 29 H 1.09000 * 109.47722 * 34.69798 * 8 7 6 30 30 H 0.96994 * 119.99756 * 0.02562 * 11 9 8 31 31 H 1.08996 * 109.47366 * 299.99598 * 12 11 9 32 32 H 1.08992 * 109.47635 * 60.00246 * 12 11 9 33 33 H 1.09004 * 109.46832 * 299.99894 * 13 12 11 34 34 H 1.09001 * 109.47420 * 59.99456 * 13 12 11 35 35 H 1.08991 * 113.61916 * 254.53321 * 16 14 13 36 36 H 1.09002 * 113.61243 * 25.44138 * 16 14 13 37 37 H 1.09001 * 113.60848 * 334.55926 * 20 14 13 38 38 H 1.08990 * 113.61574 * 105.46449 * 20 14 13 39 39 H 0.97003 * 125.63450 * 0.02562 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.6294 -0.1485 2.2382 6 6 2.8920 -1.1590 3.1842 7 6 2.3515 -2.3018 2.7146 8 6 2.3914 -3.6441 3.3984 9 6 3.6786 -4.3467 3.0512 10 8 4.4844 -3.8100 2.3208 11 7 3.9343 -5.5714 3.5524 12 6 5.1859 -6.2541 3.2153 13 6 5.2258 -7.6175 3.9084 14 6 6.5332 -8.3303 3.5569 15 1 6.7735 -8.2743 2.4951 16 6 7.7073 -7.9520 4.4750 17 6 8.1116 -9.4370 4.4359 18 1 8.4549 -9.8238 5.3953 19 9 8.9758 -9.7531 3.3820 20 6 6.6360 -9.7506 4.1376 21 7 1.7577 -2.0319 1.5174 22 1 -0.3933 0.4417 0.7651 23 1 1.7924 -0.5139 -0.8899 24 1 3.5346 1.7703 0.0322 25 1 1.5616 2.4678 -1.2085 26 1 2.9291 0.8867 2.3088 27 1 3.4293 -1.0407 4.1135 28 1 1.5469 -4.2470 3.0647 29 1 2.3336 -3.5039 4.4778 30 1 3.2896 -6.0007 4.1362 31 1 5.2442 -6.3939 2.1359 32 1 6.0301 -5.6513 3.5497 33 1 5.1673 -7.4781 4.9879 34 1 4.3816 -8.2202 3.5736 35 1 8.4330 -7.2884 4.0049 36 1 7.3969 -7.6099 5.4623 37 1 6.0321 -9.9011 5.0325 38 1 6.4980 -10.5368 3.3955 39 1 1.2889 -2.6740 0.9615 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_14644196.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:23 Heat of formation + Delta-G solvation = -58.844953 kcal Electronic energy + Delta-G solvation = -21353.762389 eV Core-core repulsion = 17792.364503 eV Total energy + Delta-G solvation = -3561.397885 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -48.69332 -42.33196 -40.61774 -39.35619 -37.70115 -36.08406 -33.33339 -31.94628 -31.65449 -29.32196 -26.87125 -26.13011 -24.86939 -22.86671 -21.95684 -21.35916 -21.00929 -20.42843 -18.95878 -18.16020 -17.40872 -17.16992 -16.84036 -16.77415 -16.43273 -16.17261 -16.01041 -15.63743 -15.23385 -15.01083 -14.64727 -14.54322 -14.28238 -14.05682 -13.86032 -13.83689 -13.57524 -13.42709 -13.09398 -12.76994 -12.50001 -12.12001 -12.00659 -11.98061 -11.82447 -11.24665 -11.16789 -10.88670 -10.64070 -10.14328 -9.80252 -8.96817 -4.97237 1.10666 1.26002 1.60306 1.69293 1.86798 1.94651 2.30627 2.51851 3.26767 3.33726 3.50930 3.59772 3.66913 3.70272 3.79285 3.87058 3.99447 4.14905 4.20391 4.27549 4.37301 4.43257 4.48647 4.57955 4.62460 4.71913 4.74219 4.79707 4.81292 4.91932 5.01154 5.12338 5.17909 5.25269 5.28871 5.41991 5.47873 5.99883 6.13287 6.51967 6.66101 6.70885 7.25317 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.053 4.053 3 Si 0.812 3.188 4 C -0.023 4.023 5 C -0.201 4.201 6 C -0.201 4.201 7 C 0.032 3.968 8 C -0.065 4.065 9 C 0.506 3.494 10 O -0.584 6.584 11 N -0.717 5.717 12 C 0.120 3.880 13 C -0.106 4.106 14 C -0.111 4.111 15 H 0.078 0.922 16 C -0.157 4.157 17 C 0.043 3.957 18 H 0.114 0.886 19 F -0.223 7.223 20 C -0.147 4.147 21 N -0.538 5.538 22 H 0.397 0.603 23 H 0.099 0.901 24 H -0.296 1.296 25 H -0.292 1.292 26 H 0.154 0.846 27 H 0.142 0.858 28 H 0.129 0.871 29 H 0.147 0.853 30 H 0.420 0.580 31 H 0.045 0.955 32 H 0.052 0.948 33 H 0.094 0.906 34 H 0.086 0.914 35 H 0.065 0.935 36 H 0.121 0.879 37 H 0.125 0.875 38 H 0.073 0.927 39 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.619 -2.782 7.849 10.046 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.163 4.163 3 Si 0.716 3.284 4 C -0.136 4.136 5 C -0.226 4.226 6 C -0.225 4.225 7 C -0.082 4.082 8 C -0.105 4.105 9 C 0.293 3.707 10 O -0.463 6.463 11 N -0.370 5.370 12 C -0.004 4.004 13 C -0.143 4.143 14 C -0.130 4.130 15 H 0.096 0.904 16 C -0.195 4.195 17 C 0.007 3.993 18 H 0.132 0.868 19 F -0.204 7.204 20 C -0.185 4.185 21 N -0.134 5.134 22 H 0.248 0.752 23 H 0.116 0.884 24 H -0.224 1.224 25 H -0.220 1.220 26 H 0.171 0.829 27 H 0.160 0.840 28 H 0.147 0.853 29 H 0.165 0.835 30 H 0.258 0.742 31 H 0.063 0.937 32 H 0.071 0.929 33 H 0.113 0.887 34 H 0.105 0.895 35 H 0.084 0.916 36 H 0.140 0.860 37 H 0.143 0.857 38 H 0.092 0.908 39 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges -4.550 -2.258 6.247 8.051 hybrid contribution 0.212 -1.156 -0.715 1.376 sum -4.337 -3.414 5.532 7.814 Atomic orbital electron populations 1.86443 1.17125 1.82260 1.50698 1.24923 0.85198 1.11306 0.94845 0.93070 0.77218 0.73964 0.84112 1.20988 1.07663 0.84938 1.00024 1.20931 1.05582 1.00429 0.95647 1.20872 1.06745 0.92643 1.02284 1.19957 1.03120 0.96466 0.88700 1.20254 0.95604 0.90696 1.03980 1.21137 0.88770 0.81430 0.79337 1.90760 1.50323 1.66715 1.38538 1.45881 1.22116 1.17656 1.51380 1.21285 0.86177 0.93738 0.99211 1.21677 0.97562 0.93187 1.01881 1.22475 0.95126 0.95976 0.99408 0.90401 1.23751 0.98294 0.95036 1.02385 1.22796 0.89697 0.98399 0.88409 0.86848 1.92773 1.72448 1.94050 1.61099 1.23610 0.94554 0.96945 1.03355 1.41902 1.44300 1.09218 1.17954 0.75215 0.88360 1.22354 1.21986 0.82868 0.84005 0.85296 0.83530 0.74231 0.93668 0.92925 0.88709 0.89545 0.91641 0.86040 0.85674 0.90823 0.74477 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.62 12.88 -148.98 -1.92 -2.54 16 2 C -0.05 -0.12 3.08 71.24 0.22 0.10 16 3 Si 0.81 0.19 30.60 68.60 2.10 2.29 16 4 C -0.02 -0.10 6.50 41.08 0.27 0.17 16 5 C -0.20 -0.96 9.37 22.14 0.21 -0.76 16 6 C -0.20 -1.05 10.77 22.14 0.24 -0.82 16 7 C 0.03 0.09 5.66 41.08 0.23 0.32 16 8 C -0.07 0.32 6.24 29.10 0.18 0.50 16 9 C 0.51 0.98 7.82 87.66 0.69 1.67 16 10 O -0.58 -8.14 16.03 -3.02 -0.05 -8.19 16 11 N -0.72 3.26 5.56 -463.07 -2.57 0.69 16 12 C 0.12 -0.22 5.67 86.38 0.49 0.27 16 13 C -0.11 0.85 5.15 30.59 0.16 1.01 16 14 C -0.11 0.46 3.61 -10.27 -0.04 0.43 16 15 H 0.08 -0.01 8.14 -2.38 -0.02 -0.03 16 16 C -0.16 0.59 7.54 31.18 0.24 0.83 16 17 C 0.04 -0.08 5.70 31.18 0.18 0.10 16 18 H 0.11 -0.64 8.14 -2.39 -0.02 -0.66 16 19 F -0.22 -1.47 17.38 44.97 0.78 -0.69 16 20 C -0.15 0.81 7.54 31.12 0.23 1.04 16 21 N -0.54 -1.71 6.07 -171.12 -1.04 -2.75 16 22 H 0.40 -2.73 8.70 -74.06 -0.64 -3.37 16 23 H 0.10 0.39 7.96 -2.39 -0.02 0.37 16 24 H -0.30 -2.09 7.11 99.48 0.71 -1.39 16 25 H -0.29 -1.81 7.11 99.48 0.71 -1.10 16 26 H 0.15 0.13 6.24 -2.91 -0.02 0.12 16 27 H 0.14 0.41 8.06 -2.92 -0.02 0.39 16 28 H 0.13 -1.37 8.14 -2.39 -0.02 -1.39 16 29 H 0.15 -1.56 8.14 -2.39 -0.02 -1.58 16 30 H 0.42 -5.17 8.47 -92.71 -0.79 -5.96 16 31 H 0.04 0.12 8.14 -2.39 -0.02 0.10 16 32 H 0.05 0.10 8.14 -2.39 -0.02 0.08 16 33 H 0.09 -1.09 7.87 -2.38 -0.02 -1.11 16 34 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 35 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 36 H 0.12 -0.99 7.92 -2.39 -0.02 -1.01 16 37 H 0.13 -1.30 8.10 -2.39 -0.02 -1.32 16 38 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 39 H 0.42 -0.07 8.96 -92.71 -0.83 -0.90 16 Total: 0.00 -25.71 332.94 -0.55 -26.26 By element: Atomic # 1 Polarization: -18.80 SS G_CDS: -1.14 Total: -19.94 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: 3.29 Total: 4.86 kcal Atomic # 7 Polarization: 1.55 SS G_CDS: -3.61 Total: -2.06 kcal Atomic # 8 Polarization: -8.76 SS G_CDS: -1.97 Total: -10.72 kcal Atomic # 9 Polarization: -1.47 SS G_CDS: 0.78 Total: -0.69 kcal Atomic # 14 Polarization: 0.19 SS G_CDS: 2.10 Total: 2.29 kcal Total: -25.71 -0.55 -26.26 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_14644196.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.584 kcal (2) G-P(sol) polarization free energy of solvation -25.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.296 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.548 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.261 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds