Wall clock time and date at job start Tue Mar 9 2021 12:57:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47182 * 2 1 4 4 C 1.50696 * 109.47185 * 119.99778 * 2 1 3 5 5 C 1.38274 * 119.94301 * 65.00307 * 4 2 1 6 6 C 1.38141 * 120.05552 * 180.27916 * 5 4 2 7 7 C 1.38738 * 119.94395 * 359.44290 * 6 5 4 8 8 O 1.35898 * 120.05510 * 180.29870 * 7 6 5 9 9 C 1.42901 * 117.00084 * 0.27943 * 8 7 6 10 10 C 1.50701 * 109.47116 * 179.97438 * 9 8 7 11 11 O 1.21284 * 119.99697 * 359.97438 * 10 9 8 12 12 N 1.34771 * 120.00084 * 180.02562 * 10 9 8 13 13 C 1.46501 * 120.00186 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47261 * 179.97438 * 13 12 10 15 15 C 1.53002 * 109.47105 * 179.97438 * 14 13 12 16 16 H 1.09006 * 112.85026 * 43.80794 * 15 14 13 17 17 C 1.53778 * 113.61490 * 174.99895 * 15 14 13 18 18 C 1.53777 * 87.08541 * 139.98121 * 17 15 14 19 19 H 1.08994 * 113.61671 * 220.02115 * 18 17 15 20 20 F 1.39903 * 113.61123 * 89.11196 * 18 17 15 21 21 C 1.53773 * 113.61627 * 272.49874 * 15 14 13 22 22 C 1.38730 * 119.88604 * 0.57278 * 7 6 5 23 23 C 1.38149 * 119.94512 * 359.70901 * 22 7 6 24 24 H 0.96702 * 114.00258 * 300.00375 * 1 2 3 25 25 H 1.08998 * 109.47382 * 240.00321 * 2 1 3 26 26 H 1.48498 * 110.00262 * 178.67946 * 3 2 1 27 27 H 1.48500 * 109.99835 * 300.00120 * 3 2 1 28 28 H 1.08002 * 119.96836 * 359.97438 * 5 4 2 29 29 H 1.07998 * 120.02987 * 179.70379 * 6 5 4 30 30 H 1.08998 * 109.47080 * 299.99770 * 9 8 7 31 31 H 1.08996 * 109.47179 * 59.99778 * 9 8 7 32 32 H 0.97001 * 120.00279 * 359.97438 * 12 10 9 33 33 H 1.08998 * 109.46884 * 299.99814 * 13 12 10 34 34 H 1.09002 * 109.47477 * 59.99359 * 13 12 10 35 35 H 1.08998 * 109.47179 * 299.99828 * 14 13 12 36 36 H 1.08996 * 109.47038 * 59.99809 * 14 13 12 37 37 H 1.09002 * 113.61694 * 254.53655 * 17 15 14 38 38 H 1.09007 * 113.61697 * 25.34963 * 17 15 14 39 39 H 1.09004 * 113.61372 * 334.56199 * 21 15 14 40 40 H 1.08998 * 113.61757 * 105.46914 * 21 15 14 41 41 H 1.07997 * 120.02650 * 179.67529 * 22 7 6 42 42 H 1.07997 * 119.96847 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.6841 -2.0605 1.3972 6 6 2.1385 -2.7127 2.5270 7 6 2.8535 -2.0145 3.4893 8 8 3.3068 -2.6552 4.5987 9 6 3.0162 -4.0502 4.7065 10 6 3.5938 -4.5858 5.9913 11 8 4.1955 -3.8459 6.7405 12 7 3.4425 -5.8872 6.3071 13 6 4.0035 -6.4078 7.5563 14 6 3.6924 -7.9014 7.6717 15 6 4.2789 -8.4452 8.9761 16 1 4.1017 -7.7870 9.8267 17 6 3.9172 -9.9148 9.2486 18 6 5.3587 -10.0942 9.7530 19 1 5.8127 -11.0380 9.4510 20 9 5.5120 -9.8282 11.1179 21 6 5.7390 -8.9102 8.8483 22 6 3.1000 -0.6598 3.3198 23 6 2.6383 -0.0109 2.1909 24 1 -0.3934 0.4417 0.7650 25 1 1.7924 -0.5138 -0.8900 26 1 3.5346 1.7703 0.0322 27 1 1.5615 2.4679 -1.2085 28 1 1.1309 -2.6045 0.6459 29 1 1.9410 -3.7663 2.6591 30 1 1.9362 -4.1975 4.7040 31 1 3.4571 -4.5795 3.8618 32 1 2.9616 -6.4791 5.7077 33 1 5.0834 -6.2600 7.5590 34 1 3.5623 -5.8788 8.4011 35 1 2.6125 -8.0489 7.6692 36 1 4.1334 -8.4306 6.8270 37 1 3.1635 -10.0421 10.0257 38 1 3.6948 -10.4844 8.3462 39 1 6.0163 -9.2056 7.8363 40 1 6.4564 -8.2265 9.3023 41 1 3.6518 -0.1129 4.0699 42 1 2.8297 1.0438 2.0588 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_2989410.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:36 Heat of formation + Delta-G solvation = -103.793195 kcal Electronic energy + Delta-G solvation = -24077.892264 eV Core-core repulsion = 20133.062855 eV Total energy + Delta-G solvation = -3944.829409 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -48.64304 -41.56254 -40.62374 -39.58040 -38.95771 -37.15554 -36.15193 -32.58761 -32.12149 -31.83074 -29.51758 -27.04649 -26.38695 -25.76573 -24.02715 -23.04440 -22.41315 -21.68308 -20.59272 -19.51869 -18.53045 -18.16117 -17.59289 -17.48552 -17.07415 -16.87761 -16.61037 -16.43579 -16.37275 -15.92674 -15.85532 -15.50869 -15.30232 -14.95216 -14.69444 -14.61875 -14.20786 -14.01491 -13.88233 -13.73420 -13.52418 -13.34620 -13.22743 -12.71782 -12.28553 -12.18554 -12.17467 -12.05078 -11.97208 -11.71815 -11.36894 -11.26356 -10.89337 -10.43053 -10.26175 -10.08486 -9.24190 -5.03452 0.22049 0.31426 1.29906 1.39347 1.44712 1.63965 1.97866 2.49868 2.62997 3.10697 3.15077 3.39030 3.41386 3.47551 3.52976 3.67666 3.68280 3.71047 3.83283 3.84188 3.86348 3.92635 4.07675 4.21692 4.23787 4.34288 4.39113 4.46601 4.53990 4.55699 4.59155 4.63209 4.74028 4.84809 4.90913 4.95087 4.95757 5.13883 5.21324 5.25836 5.30713 5.45119 5.61673 6.17607 6.32189 6.56917 7.03735 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.063 4.063 3 Si 0.684 3.316 4 C -0.158 4.158 5 C -0.051 4.051 6 C -0.210 4.210 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.041 3.959 10 C 0.515 3.485 11 O -0.511 6.511 12 N -0.729 5.729 13 C 0.120 3.880 14 C -0.120 4.120 15 C -0.108 4.108 16 H 0.100 0.900 17 C -0.157 4.157 18 C 0.061 3.939 19 H 0.097 0.903 20 F -0.197 7.197 21 C -0.160 4.160 22 C -0.141 4.141 23 C -0.074 4.074 24 H 0.379 0.621 25 H 0.112 0.888 26 H -0.257 1.257 27 H -0.255 1.255 28 H 0.129 0.871 29 H 0.130 0.870 30 H 0.095 0.905 31 H 0.095 0.905 32 H 0.402 0.598 33 H 0.072 0.928 34 H 0.071 0.929 35 H 0.075 0.925 36 H 0.074 0.926 37 H 0.082 0.918 38 H 0.100 0.900 39 H 0.100 0.900 40 H 0.082 0.918 41 H 0.138 0.862 42 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.643 -3.901 -1.525 4.952 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.174 4.174 3 Si 0.586 3.414 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.229 4.229 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.038 4.038 10 C 0.299 3.701 11 O -0.385 6.385 12 N -0.383 5.383 13 C -0.003 4.003 14 C -0.158 4.158 15 C -0.126 4.126 16 H 0.118 0.882 17 C -0.195 4.195 18 C 0.025 3.975 19 H 0.115 0.885 20 F -0.177 7.177 21 C -0.198 4.198 22 C -0.160 4.160 23 C -0.091 4.091 24 H 0.226 0.774 25 H 0.129 0.871 26 H -0.182 1.182 27 H -0.180 1.180 28 H 0.147 0.853 29 H 0.148 0.852 30 H 0.113 0.887 31 H 0.112 0.888 32 H 0.237 0.763 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.094 0.906 36 H 0.093 0.907 37 H 0.101 0.899 38 H 0.118 0.882 39 H 0.118 0.882 40 H 0.101 0.899 41 H 0.156 0.844 42 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -1.495 -2.969 -1.741 3.753 hybrid contribution -0.232 -1.201 -0.471 1.310 sum -1.727 -4.170 -2.212 5.026 Atomic orbital electron populations 1.86498 1.17216 1.81703 1.49291 1.24963 0.85137 1.09944 0.97331 0.94783 0.81166 0.78154 0.87298 1.20250 1.02617 0.95126 0.97837 1.20800 0.96278 0.93556 0.96267 1.21289 1.04513 1.00699 0.96391 1.19075 0.93890 0.92326 0.85888 1.86168 1.73568 1.21250 1.39051 1.22465 1.01763 0.82261 0.97324 1.20030 0.80564 0.82337 0.87184 1.90797 1.39895 1.56899 1.50923 1.45823 1.58777 1.09475 1.24270 1.21422 0.99433 0.93692 0.85745 1.21775 1.01951 0.94229 0.97862 1.22515 0.95640 0.96349 0.98138 0.88208 1.23614 0.96568 0.96687 1.02638 1.22375 0.98533 0.99715 0.76892 0.88531 1.92833 1.96472 1.95430 1.33003 1.23696 0.97539 0.97737 1.00828 1.20415 1.04291 0.91677 0.99591 1.20817 0.96426 0.99127 0.92776 0.77362 0.87068 1.18192 1.17973 0.85292 0.85240 0.88681 0.88765 0.76342 0.90986 0.91026 0.90626 0.90749 0.89948 0.88155 0.88164 0.89922 0.84383 0.84847 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.07 12.83 -35.23 -0.45 -0.53 16 2 C -0.06 0.02 2.80 36.00 0.10 0.12 16 3 Si 0.68 -0.65 29.80 -169.99 -5.07 -5.72 16 4 C -0.16 -0.02 5.35 -104.60 -0.56 -0.58 16 5 C -0.05 -0.01 9.68 -39.60 -0.38 -0.39 16 6 C -0.21 0.03 9.04 -39.43 -0.36 -0.32 16 7 C 0.13 0.20 6.69 -39.21 -0.26 -0.06 16 8 O -0.29 -0.74 9.67 -39.33 -0.38 -1.12 16 9 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 10 C 0.51 0.59 7.91 -10.99 -0.09 0.50 16 11 O -0.51 -3.26 16.50 -14.36 -0.24 -3.49 16 12 N -0.73 1.63 5.56 -60.30 -0.33 1.30 16 13 C 0.12 -0.20 5.67 -4.04 -0.02 -0.23 16 14 C -0.12 0.48 5.17 -26.73 -0.14 0.34 16 15 C -0.11 0.28 3.63 -89.81 -0.33 -0.05 16 16 H 0.10 -0.16 8.13 -51.93 -0.42 -0.58 16 17 C -0.16 0.43 7.54 -25.92 -0.20 0.23 16 18 C 0.06 -0.08 5.69 -25.92 -0.15 -0.23 16 19 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 20 F -0.20 -0.45 17.38 2.25 0.04 -0.41 16 21 C -0.16 0.37 7.53 -25.92 -0.20 0.18 16 22 C -0.14 -0.15 9.99 -39.43 -0.39 -0.54 16 23 C -0.07 0.01 8.66 -39.61 -0.34 -0.33 16 24 H 0.38 -1.38 8.70 45.56 0.40 -0.98 16 25 H 0.11 0.01 7.96 -51.93 -0.41 -0.41 16 26 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 27 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 28 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 29 H 0.13 -0.35 6.30 -52.49 -0.33 -0.68 16 30 H 0.10 -0.35 7.65 -51.93 -0.40 -0.75 16 31 H 0.09 -0.34 7.67 -51.93 -0.40 -0.74 16 32 H 0.40 -2.25 8.47 -40.82 -0.35 -2.60 16 33 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 36 H 0.07 -0.36 7.84 -51.93 -0.41 -0.77 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.10 -0.43 8.10 -51.92 -0.42 -0.85 16 39 H 0.10 -0.38 7.90 -51.93 -0.41 -0.79 16 40 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.14 0.04 8.06 -52.49 -0.42 -0.38 16 42 H 0.13 -0.30 4.90 -52.49 -0.26 -0.56 16 LS Contribution 355.08 15.07 5.35 5.35 Total: 0.00 -9.89 355.08 -10.19 -20.08 By element: Atomic # 1 Polarization: -8.25 SS G_CDS: -5.99 Total: -14.24 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -3.12 Total: -1.22 kcal Atomic # 7 Polarization: 1.63 SS G_CDS: -0.33 Total: 1.30 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -1.07 Total: -5.14 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.07 Total: -5.72 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.89 -10.19 -20.08 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_2989410.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.714 kcal (2) G-P(sol) polarization free energy of solvation -9.893 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.079 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds