Wall clock time and date at job start Tue Mar 9 2021 12:57:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47030 * 2 1 4 4 C 1.50696 * 109.47278 * 239.99675 * 2 1 3 5 5 C 1.38268 * 119.94238 * 119.72540 * 4 2 1 6 6 C 1.38148 * 120.05255 * 179.72402 * 5 4 2 7 7 C 1.38731 * 119.94303 * 0.55323 * 6 5 4 8 8 O 1.35900 * 120.05280 * 179.74897 * 7 6 5 9 9 C 1.42897 * 117.00207 * 359.97334 * 8 7 6 10 10 C 1.53005 * 109.47223 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47105 * 179.97438 * 10 9 8 12 12 O 1.21278 * 119.99985 * 0.02562 * 11 10 9 13 13 N 1.34781 * 119.99787 * 179.97438 * 11 10 9 14 14 C 1.46491 * 119.99579 * 180.02562 * 13 11 10 15 15 C 1.53005 * 109.46897 * 180.02562 * 14 13 11 16 16 C 1.53000 * 109.47203 * 180.02562 * 15 14 13 17 17 H 1.09001 * 112.85154 * 316.20118 * 16 15 14 18 18 C 1.53778 * 113.61462 * 87.50153 * 16 15 14 19 19 C 1.53780 * 87.08030 * 139.98000 * 18 16 15 20 20 H 1.09004 * 113.61919 * 220.01700 * 19 18 16 21 21 F 1.39911 * 113.61237 * 89.11844 * 19 18 16 22 22 C 1.53776 * 87.08427 * 334.57178 * 19 18 16 23 23 C 1.38728 * 119.89302 * 359.72113 * 7 6 5 24 24 C 1.38154 * 119.93919 * 0.02562 * 23 7 6 25 25 H 0.96700 * 114.00022 * 300.00827 * 1 2 3 26 26 H 1.08997 * 109.46978 * 119.99554 * 2 1 3 27 27 H 1.48506 * 110.00048 * 178.68200 * 3 2 1 28 28 H 1.48502 * 109.99996 * 299.99525 * 3 2 1 29 29 H 1.07998 * 119.97204 * 359.97438 * 5 4 2 30 30 H 1.08003 * 120.02568 * 180.27470 * 6 5 4 31 31 H 1.08998 * 109.47221 * 300.00355 * 9 8 7 32 32 H 1.09003 * 109.47106 * 60.00320 * 9 8 7 33 33 H 1.08998 * 109.47207 * 300.00236 * 10 9 8 34 34 H 1.09003 * 109.46922 * 60.00080 * 10 9 8 35 35 H 0.96996 * 119.99855 * 0.02562 * 13 11 10 36 36 H 1.08998 * 109.47462 * 300.00303 * 14 13 11 37 37 H 1.09003 * 109.47191 * 60.00468 * 14 13 11 38 38 H 1.08998 * 109.47207 * 300.00331 * 15 14 13 39 39 H 1.09003 * 109.46922 * 60.00175 * 15 14 13 40 40 H 1.08998 * 113.61670 * 254.53267 * 18 16 15 41 41 H 1.09005 * 113.61338 * 25.43457 * 18 16 15 42 42 H 1.09003 * 113.61240 * 270.88342 * 22 19 18 43 43 H 1.09000 * 113.69619 * 139.99111 * 22 19 18 44 44 H 1.07991 * 120.03247 * 180.02562 * 23 7 6 45 45 H 1.07997 * 119.96817 * 179.97438 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7216 -0.0357 -2.1426 6 6 3.1880 -0.6864 -3.2684 7 6 2.8536 -2.0146 -3.4891 8 8 3.3070 -2.6554 -4.5984 9 6 4.1235 -1.9003 -5.4957 10 6 4.5346 -2.7824 -6.6763 11 6 5.3951 -1.9858 -7.6229 12 8 5.6544 -0.8268 -7.3772 13 7 5.8773 -2.5617 -8.7420 14 6 6.7143 -1.7874 -9.6618 15 6 7.1253 -2.6695 -10.8425 16 6 7.9999 -1.8611 -11.8029 17 1 7.6144 -0.8578 -11.9838 18 6 9.4961 -1.8935 -11.4489 19 6 9.7703 -2.0029 -12.9582 20 1 10.5764 -2.6932 -13.2067 21 9 9.8983 -0.7641 -13.5957 22 6 8.3681 -2.6206 -13.0884 23 6 2.0559 -2.6877 -2.5752 24 6 1.5963 -2.0340 -1.4482 25 1 -0.3933 0.4418 0.7650 26 1 1.7923 -0.5138 0.8900 27 1 3.5346 1.7703 0.0321 28 1 1.5616 2.4679 -1.2086 29 1 2.9776 0.9996 -1.9728 30 1 3.8089 -0.1603 -3.9785 31 1 3.5616 -1.0413 -5.8627 32 1 5.0149 -1.5546 -4.9723 33 1 5.0963 -3.6415 -6.3097 34 1 3.6429 -3.1277 -7.1996 35 1 5.6702 -3.4887 -8.9383 36 1 6.1524 -0.9285 -10.0287 37 1 7.6058 -1.4418 -9.1384 38 1 7.6870 -3.5287 -10.4759 39 1 6.2336 -3.0148 -11.3658 40 1 9.8599 -0.9669 -11.0051 41 1 9.7925 -2.7786 -10.8860 42 1 8.3561 -3.7045 -12.9737 43 1 7.8202 -2.2820 -13.9677 44 1 1.7945 -3.7218 -2.7445 45 1 0.9750 -2.5575 -0.7367 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_4549602.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:39 Heat of formation + Delta-G solvation = -111.697522 kcal Electronic energy + Delta-G solvation = -25695.171019 eV Core-core repulsion = 21594.461233 eV Total energy + Delta-G solvation = -4100.709785 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -48.64545 -41.36441 -40.78470 -39.56547 -39.02680 -37.21720 -36.20080 -33.58803 -32.22643 -31.81802 -31.27871 -27.14417 -26.88870 -26.07213 -25.06368 -23.50480 -22.93218 -22.02565 -21.48528 -20.58602 -19.51186 -18.37255 -17.98069 -17.56430 -17.40417 -17.31987 -16.97549 -16.72139 -16.63996 -16.51094 -15.96759 -15.69486 -15.55800 -15.46740 -14.87658 -14.70644 -14.65165 -14.34188 -14.03439 -13.85582 -13.79618 -13.66858 -13.59706 -13.25595 -12.99009 -12.81219 -12.67474 -12.33863 -12.18280 -11.97194 -11.91039 -11.83781 -11.71170 -11.37361 -11.28955 -10.95443 -10.29460 -10.23089 -9.99249 -9.13686 -4.95428 0.32019 0.36270 1.31700 1.49390 1.65878 1.66221 2.00461 2.43023 2.68145 3.10704 3.15270 3.41213 3.42504 3.47606 3.52176 3.67881 3.74423 3.79135 3.79774 3.86410 3.95338 4.02271 4.08961 4.24094 4.25340 4.29056 4.37538 4.39548 4.44840 4.46634 4.55612 4.59554 4.62392 4.63487 4.74397 4.75665 4.84535 4.91725 4.96381 4.97297 5.22141 5.25928 5.30657 5.31259 5.53987 5.74000 6.28381 6.37279 6.65171 7.05201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.065 4.065 3 Si 0.680 3.320 4 C -0.114 4.114 5 C -0.083 4.083 6 C -0.201 4.201 7 C 0.137 3.863 8 O -0.315 6.315 9 C 0.073 3.927 10 C -0.141 4.141 11 C 0.519 3.481 12 O -0.538 6.538 13 N -0.730 5.730 14 C 0.118 3.882 15 C -0.121 4.121 16 C -0.108 4.108 17 H 0.099 0.901 18 C -0.160 4.160 19 C 0.061 3.939 20 H 0.097 0.903 21 F -0.197 7.197 22 C -0.157 4.157 23 C -0.149 4.149 24 C -0.050 4.050 25 H 0.382 0.618 26 H 0.074 0.926 27 H -0.256 1.256 28 H -0.251 1.251 29 H 0.120 0.880 30 H 0.134 0.866 31 H 0.073 0.927 32 H 0.073 0.927 33 H 0.108 0.892 34 H 0.108 0.892 35 H 0.403 0.597 36 H 0.070 0.930 37 H 0.070 0.930 38 H 0.074 0.926 39 H 0.075 0.925 40 H 0.082 0.918 41 H 0.100 0.900 42 H 0.100 0.900 43 H 0.082 0.918 44 H 0.136 0.864 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.042 -4.150 1.214 4.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.176 4.176 3 Si 0.582 3.418 4 C -0.114 4.114 5 C -0.100 4.100 6 C -0.219 4.219 7 C 0.092 3.908 8 O -0.229 6.229 9 C -0.003 4.003 10 C -0.181 4.181 11 C 0.305 3.695 12 O -0.415 6.415 13 N -0.382 5.382 14 C -0.005 4.005 15 C -0.158 4.158 16 C -0.126 4.126 17 H 0.117 0.883 18 C -0.198 4.198 19 C 0.025 3.975 20 H 0.115 0.885 21 F -0.178 7.178 22 C -0.195 4.195 23 C -0.167 4.167 24 C -0.068 4.068 25 H 0.229 0.771 26 H 0.092 0.908 27 H -0.181 1.181 28 H -0.176 1.176 29 H 0.137 0.863 30 H 0.152 0.848 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.126 0.874 34 H 0.126 0.874 35 H 0.238 0.762 36 H 0.088 0.912 37 H 0.089 0.911 38 H 0.092 0.908 39 H 0.093 0.907 40 H 0.100 0.900 41 H 0.118 0.882 42 H 0.118 0.882 43 H 0.101 0.899 44 H 0.154 0.846 45 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.796 -3.177 0.309 3.290 hybrid contribution 0.128 -0.701 -0.457 0.847 sum 0.923 -3.879 -0.148 3.990 Atomic orbital electron populations 1.86493 1.17352 1.81762 1.49669 1.24593 0.85566 1.10071 0.97385 0.95453 0.80666 0.78263 0.87458 1.19257 1.00864 0.94851 0.96461 1.20660 0.97253 0.98543 0.93565 1.21210 1.05798 0.94532 1.00399 1.18953 0.94172 0.90882 0.86805 1.85970 1.65078 1.40347 1.31474 1.22432 0.94712 0.93904 0.89219 1.21465 1.01374 0.99867 0.95373 1.20298 0.80074 0.87456 0.81669 1.90761 1.58862 1.17274 1.74563 1.45964 1.52939 1.16090 1.23228 1.21409 0.94752 0.94635 0.89753 1.21775 1.00412 0.98397 0.95254 1.22516 0.94746 1.00229 0.95159 0.88271 1.23693 0.96295 1.04252 0.95547 1.22380 0.99253 0.82359 0.93514 0.88517 1.92834 1.97055 1.44731 1.83134 1.23614 0.95772 1.01207 0.98915 1.20511 1.00759 1.01114 0.94340 1.20814 0.96516 0.93358 0.96069 0.77094 0.90839 1.18063 1.17602 0.86287 0.84823 0.90909 0.90905 0.87401 0.87396 0.76229 0.91194 0.91132 0.90768 0.90665 0.89965 0.88163 0.88150 0.89945 0.84613 0.84665 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.42 12.74 -35.23 -0.45 -0.87 16 2 C -0.07 -0.04 2.81 36.00 0.10 0.06 16 3 Si 0.68 -0.13 29.78 -169.99 -5.06 -5.19 16 4 C -0.11 -0.37 5.42 -104.60 -0.57 -0.93 16 5 C -0.08 -0.31 8.66 -39.60 -0.34 -0.65 16 6 C -0.20 -0.70 9.04 -39.43 -0.36 -1.05 16 7 C 0.14 0.47 6.69 -39.22 -0.26 0.21 16 8 O -0.31 -0.80 10.14 -19.43 -0.20 -1.00 16 9 C 0.07 0.08 4.03 37.16 0.15 0.23 16 10 C -0.14 0.20 6.07 -27.88 -0.17 0.03 16 11 C 0.52 0.38 7.83 -10.98 -0.09 0.29 16 12 O -0.54 -2.72 15.98 5.56 0.09 -2.63 16 13 N -0.73 1.35 5.56 -60.30 -0.33 1.02 16 14 C 0.12 -0.16 5.66 -4.04 -0.02 -0.18 16 15 C -0.12 0.42 5.17 -26.73 -0.14 0.28 16 16 C -0.11 0.24 3.63 -89.81 -0.33 -0.08 16 17 H 0.10 -0.12 8.13 -51.93 -0.42 -0.54 16 18 C -0.16 0.33 7.53 -25.92 -0.20 0.14 16 19 C 0.06 -0.06 5.69 -25.92 -0.15 -0.21 16 20 H 0.10 -0.24 8.14 -51.93 -0.42 -0.67 16 21 F -0.20 -0.49 17.38 2.25 0.04 -0.45 16 22 C -0.16 0.38 7.54 -25.92 -0.20 0.18 16 23 C -0.15 -0.40 9.99 -39.43 -0.39 -0.79 16 24 C -0.05 -0.13 9.60 -39.60 -0.38 -0.51 16 25 H 0.38 -1.65 8.74 45.56 0.40 -1.26 16 26 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 27 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 28 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 29 H 0.12 0.37 4.87 -52.49 -0.26 0.12 16 30 H 0.13 0.31 6.30 -52.48 -0.33 -0.02 16 31 H 0.07 0.12 7.62 -51.93 -0.40 -0.27 16 32 H 0.07 0.11 7.62 -51.93 -0.40 -0.29 16 33 H 0.11 -0.32 8.14 -51.93 -0.42 -0.75 16 34 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 35 H 0.40 -1.92 8.47 -40.82 -0.35 -2.27 16 36 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 38 H 0.07 -0.32 7.84 -51.93 -0.41 -0.73 16 39 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 40 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 41 H 0.10 -0.35 7.90 -51.93 -0.41 -0.76 16 42 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 43 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 44 H 0.14 0.13 8.06 -52.49 -0.42 -0.30 16 45 H 0.14 0.13 8.06 -52.49 -0.42 -0.29 16 LS Contribution 375.96 15.07 5.67 5.67 Total: 0.00 -9.34 375.96 -10.41 -19.75 By element: Atomic # 1 Polarization: -6.46 SS G_CDS: -6.82 Total: -13.29 kcal Atomic # 6 Polarization: 0.33 SS G_CDS: -3.33 Total: -3.00 kcal Atomic # 7 Polarization: 1.35 SS G_CDS: -0.33 Total: 1.02 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: -0.56 Total: -4.50 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: -5.06 Total: -5.19 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.34 -10.41 -19.75 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_4549602.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.952 kcal (2) G-P(sol) polarization free energy of solvation -9.339 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.746 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds