Wall clock time and date at job start Tue Mar 9 2021 12:58:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47182 * 2 1 4 4 C 1.50696 * 109.47185 * 119.99778 * 2 1 3 5 5 C 1.38274 * 119.94301 * 65.00307 * 4 2 1 6 6 C 1.38141 * 120.05552 * 180.27916 * 5 4 2 7 7 C 1.38738 * 119.94395 * 359.44290 * 6 5 4 8 8 O 1.35898 * 120.05510 * 180.29870 * 7 6 5 9 9 C 1.42901 * 117.00084 * 0.27943 * 8 7 6 10 10 F 1.39900 * 109.47092 * 299.99790 * 9 8 7 11 11 F 1.39899 * 109.47250 * 59.99806 * 9 8 7 12 12 C 1.50701 * 109.47116 * 179.97438 * 9 8 7 13 13 O 1.21284 * 119.99697 * 359.97438 * 12 9 8 14 14 N 1.34771 * 120.00084 * 180.02562 * 12 9 8 15 15 C 1.46501 * 120.00186 * 180.02562 * 14 12 9 16 16 C 1.52997 * 109.47261 * 179.97438 * 15 14 12 17 17 C 1.53002 * 109.47105 * 179.97438 * 16 15 14 18 18 H 1.09006 * 112.85026 * 43.80794 * 17 16 15 19 19 C 1.53778 * 113.61490 * 174.99895 * 17 16 15 20 20 C 1.53777 * 87.08541 * 139.98121 * 19 17 16 21 21 H 1.08999 * 113.62030 * 219.93678 * 20 19 17 22 22 F 1.39903 * 113.61123 * 89.11196 * 20 19 17 23 23 C 1.53773 * 113.61627 * 272.49874 * 17 16 15 24 24 C 1.38730 * 119.88604 * 0.57278 * 7 6 5 25 25 C 1.38149 * 119.94512 * 359.70901 * 24 7 6 26 26 H 0.96696 * 114.00119 * 59.99558 * 1 2 3 27 27 H 1.08998 * 109.47382 * 240.00321 * 2 1 3 28 28 H 1.48503 * 110.00048 * 59.99824 * 3 2 1 29 29 H 1.48497 * 110.00195 * 181.31741 * 3 2 1 30 30 H 1.08002 * 119.96836 * 359.97438 * 5 4 2 31 31 H 1.07998 * 120.02987 * 179.70379 * 6 5 4 32 32 H 0.97001 * 120.00279 * 359.97438 * 14 12 9 33 33 H 1.08998 * 109.46884 * 299.99814 * 15 14 12 34 34 H 1.09002 * 109.47477 * 59.99359 * 15 14 12 35 35 H 1.08998 * 109.47179 * 299.99828 * 16 15 14 36 36 H 1.08996 * 109.47038 * 59.99809 * 16 15 14 37 37 H 1.09002 * 113.61694 * 254.53655 * 19 17 16 38 38 H 1.09007 * 113.61697 * 25.34963 * 19 17 16 39 39 H 1.09004 * 113.61372 * 334.56199 * 23 17 16 40 40 H 1.08998 * 113.61757 * 105.46914 * 23 17 16 41 41 H 1.07997 * 120.02650 * 179.67529 * 24 7 6 42 42 H 1.07997 * 119.96847 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.6841 -2.0605 1.3972 6 6 2.1385 -2.7127 2.5270 7 6 2.8535 -2.0145 3.4893 8 8 3.3068 -2.6552 4.5987 9 6 3.0162 -4.0502 4.7065 10 9 1.6300 -4.2393 4.7033 11 9 3.5821 -4.7296 3.6224 12 6 3.5938 -4.5858 5.9913 13 8 4.1955 -3.8459 6.7405 14 7 3.4425 -5.8872 6.3071 15 6 4.0035 -6.4078 7.5563 16 6 3.6924 -7.9014 7.6717 17 6 4.2789 -8.4452 8.9761 18 1 4.1017 -7.7870 9.8267 19 6 3.9172 -9.9148 9.2486 20 6 5.3587 -10.0942 9.7530 21 1 5.8123 -11.0386 9.4523 22 9 5.5120 -9.8282 11.1179 23 6 5.7390 -8.9102 8.8483 24 6 3.1000 -0.6598 3.3198 25 6 2.6383 -0.0109 2.1909 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7703 -0.0321 30 1 1.1309 -2.6045 0.6459 31 1 1.9410 -3.7663 2.6591 32 1 2.9616 -6.4791 5.7077 33 1 5.0834 -6.2600 7.5590 34 1 3.5623 -5.8788 8.4011 35 1 2.6125 -8.0489 7.6692 36 1 4.1334 -8.4306 6.8270 37 1 3.1635 -10.0421 10.0257 38 1 3.6948 -10.4844 8.3462 39 1 6.0163 -9.2056 7.8363 40 1 6.4564 -8.2265 9.3023 41 1 3.6518 -0.1129 4.0699 42 1 2.8297 1.0438 2.0588 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_4549640.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:04 Heat of formation + Delta-G solvation = -194.095138 kcal Electronic energy + Delta-G solvation = -29778.953130 eV Core-core repulsion = 24891.299984 eV Total energy + Delta-G solvation = -4887.653146 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.122 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -50.81588 -48.79198 -48.66558 -41.36576 -41.03266 -39.63562 -39.13178 -37.32692 -36.52441 -32.55438 -32.26500 -32.15007 -29.03963 -27.08521 -26.54519 -25.73501 -24.41361 -23.18553 -22.63101 -22.24078 -20.73529 -20.48643 -19.87107 -19.61414 -18.44111 -17.97711 -17.50281 -17.22282 -17.08241 -16.97088 -16.77556 -16.63592 -16.23257 -16.07173 -15.83176 -15.58273 -15.46850 -15.29532 -15.18512 -15.03801 -14.87078 -14.70011 -14.50845 -14.14577 -13.96882 -13.93863 -13.76655 -13.67057 -13.35769 -13.07537 -12.85582 -12.37819 -12.25899 -12.13867 -12.04211 -11.93552 -11.58430 -11.39891 -11.18489 -10.61051 -10.37451 -10.16904 -9.51625 -5.01253 0.04000 0.19939 0.50882 0.72764 1.23756 1.60851 1.75692 1.93194 2.04112 2.45745 2.74758 3.06381 3.10579 3.29536 3.34136 3.35979 3.46504 3.59689 3.62347 3.65670 3.80181 3.83990 3.94744 4.07683 4.10806 4.15280 4.30940 4.36393 4.43954 4.44042 4.47423 4.57693 4.63879 4.77359 4.80355 4.82665 4.86268 4.90289 4.95310 5.10216 5.27064 5.33929 5.35673 5.75084 5.87962 6.40220 6.57793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.069 4.069 3 Si 0.682 3.318 4 C -0.097 4.097 5 C -0.049 4.049 6 C -0.188 4.188 7 C 0.107 3.893 8 O -0.286 6.286 9 C 0.432 3.568 10 F -0.174 7.174 11 F -0.175 7.175 12 C 0.515 3.485 13 O -0.467 6.467 14 N -0.704 5.704 15 C 0.117 3.883 16 C -0.122 4.122 17 C -0.107 4.107 18 H 0.101 0.899 19 C -0.157 4.157 20 C 0.061 3.939 21 H 0.097 0.903 22 F -0.197 7.197 23 C -0.161 4.161 24 C -0.120 4.120 25 C -0.087 4.087 26 H 0.383 0.617 27 H 0.076 0.924 28 H -0.249 1.249 29 H -0.253 1.253 30 H 0.137 0.863 31 H 0.137 0.863 32 H 0.410 0.590 33 H 0.080 0.920 34 H 0.080 0.920 35 H 0.078 0.922 36 H 0.077 0.923 37 H 0.083 0.917 38 H 0.101 0.899 39 H 0.101 0.899 40 H 0.083 0.917 41 H 0.143 0.857 42 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.435 -2.995 -5.123 6.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.180 4.180 3 Si 0.583 3.417 4 C -0.097 4.097 5 C -0.067 4.067 6 C -0.207 4.207 7 C 0.064 3.936 8 O -0.202 6.202 9 C 0.354 3.646 10 F -0.156 7.156 11 F -0.156 7.156 12 C 0.293 3.707 13 O -0.338 6.338 14 N -0.358 5.358 15 C -0.005 4.005 16 C -0.160 4.160 17 C -0.126 4.126 18 H 0.119 0.881 19 C -0.195 4.195 20 C 0.025 3.975 21 H 0.115 0.885 22 F -0.177 7.177 23 C -0.198 4.198 24 C -0.139 4.139 25 C -0.105 4.105 26 H 0.231 0.769 27 H 0.094 0.906 28 H -0.174 1.174 29 H -0.178 1.178 30 H 0.154 0.846 31 H 0.154 0.846 32 H 0.246 0.754 33 H 0.099 0.901 34 H 0.098 0.902 35 H 0.097 0.903 36 H 0.096 0.904 37 H 0.101 0.899 38 H 0.119 0.881 39 H 0.119 0.881 40 H 0.101 0.899 41 H 0.161 0.839 42 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.307 -2.099 -3.395 4.003 hybrid contribution -0.406 -1.060 -0.330 1.182 sum -0.713 -3.159 -3.725 4.936 Atomic orbital electron populations 1.86497 1.17139 1.81819 1.49746 1.24640 0.85781 1.10391 0.97165 0.95279 0.80891 0.78049 0.87483 1.19368 1.00207 0.94285 0.95888 1.20813 0.96134 0.93433 0.96370 1.21591 1.02270 1.01072 0.95759 1.18927 0.96364 0.92548 0.85779 1.86661 1.73626 1.18947 1.40987 1.21841 0.76104 0.80838 0.85807 1.93197 1.30990 1.94782 1.96596 1.93191 1.84629 1.80145 1.57667 1.19288 0.82222 0.83823 0.85414 1.90885 1.38141 1.56459 1.48290 1.45818 1.57120 1.08252 1.24651 1.21646 0.99821 0.94338 0.84659 1.21805 1.02350 0.93601 0.98249 1.22515 0.95711 0.96502 0.97904 0.88088 1.23615 0.96626 0.96512 1.02720 1.22373 0.98502 0.99724 0.76889 0.88475 1.92835 1.96468 1.95431 1.32994 1.23707 0.97430 0.97786 1.00924 1.20338 1.03325 0.90992 0.99235 1.20743 0.97716 0.99027 0.92969 0.76939 0.90635 1.17392 1.17802 0.84551 0.84565 0.75432 0.90130 0.90170 0.90289 0.90411 0.89875 0.88078 0.88081 0.89865 0.83944 0.85238 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.09 12.81 -35.23 -0.45 -0.54 16 2 C -0.07 0.00 2.79 36.00 0.10 0.11 16 3 Si 0.68 -0.75 29.85 -169.99 -5.07 -5.82 16 4 C -0.10 -0.25 5.38 -104.60 -0.56 -0.81 16 5 C -0.05 -0.12 9.68 -39.60 -0.38 -0.50 16 6 C -0.19 -0.57 8.26 -39.43 -0.33 -0.90 16 7 C 0.11 0.44 6.48 -39.21 -0.25 0.18 16 8 O -0.29 -1.31 9.60 -39.33 -0.38 -1.69 16 9 C 0.43 1.04 2.05 36.01 0.07 1.11 16 10 F -0.17 -0.32 15.27 2.25 0.03 -0.29 16 11 F -0.17 -0.28 15.31 2.25 0.03 -0.24 16 12 C 0.52 1.13 7.34 -10.99 -0.08 1.05 16 13 O -0.47 -2.65 16.50 -14.36 -0.24 -2.88 16 14 N -0.70 1.02 5.56 -60.30 -0.33 0.68 16 15 C 0.12 -0.26 5.67 -4.04 -0.02 -0.28 16 16 C -0.12 0.52 5.17 -26.73 -0.14 0.38 16 17 C -0.11 0.32 3.63 -89.81 -0.33 0.00 16 18 H 0.10 -0.22 8.13 -51.93 -0.42 -0.64 16 19 C -0.16 0.46 7.54 -25.92 -0.20 0.27 16 20 C 0.06 -0.09 5.69 -25.92 -0.15 -0.24 16 21 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 22 F -0.20 -0.40 17.38 2.25 0.04 -0.36 16 23 C -0.16 0.44 7.53 -25.92 -0.20 0.24 16 24 C -0.12 -0.40 9.99 -39.43 -0.39 -0.79 16 25 C -0.09 -0.25 8.66 -39.61 -0.34 -0.59 16 26 H 0.38 -1.89 8.74 45.56 0.40 -1.49 16 27 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 28 H -0.25 -0.50 7.05 56.52 0.40 -0.11 16 29 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 30 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 31 H 0.14 0.26 5.10 -52.49 -0.27 -0.01 16 32 H 0.41 -1.63 8.47 -40.82 -0.35 -1.98 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 36 H 0.08 -0.39 7.84 -51.93 -0.41 -0.80 16 37 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.10 -0.45 8.10 -51.92 -0.42 -0.87 16 39 H 0.10 -0.41 7.90 -51.93 -0.41 -0.82 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.14 0.26 8.06 -52.49 -0.42 -0.17 16 42 H 0.13 0.23 4.86 -52.49 -0.26 -0.02 16 LS Contribution 364.35 15.07 5.49 5.49 Total: 0.00 -8.73 364.35 -9.20 -17.93 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -5.13 Total: -11.49 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -3.19 Total: -0.79 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -0.33 Total: 0.68 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -1.07 Total: -5.11 kcal Atomic # 9 Polarization: -1.00 SS G_CDS: 0.11 Total: -0.89 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.07 Total: -5.82 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -8.73 -9.20 -17.93 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_4549640.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -176.164 kcal (2) G-P(sol) polarization free energy of solvation -8.734 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -184.898 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.197 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.931 kcal (6) G-S(sol) free energy of system = (1) + (5) -194.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds