Wall clock time and date at job start Tue Mar 9 2021 12:58:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35897 * 117.00616 * 2 1 4 4 C 1.38608 * 120.03000 * 180.27511 * 3 2 1 5 5 C 1.38658 * 119.89348 * 180.20766 * 4 3 2 6 6 O 1.35892 * 120.03332 * 179.78950 * 5 4 3 7 7 C 1.42905 * 116.99665 * 359.72454 * 6 5 4 8 8 C 1.50699 * 109.46972 * 179.97438 * 7 6 5 9 9 O 1.21282 * 120.00041 * 359.97438 * 8 7 6 10 10 N 1.34779 * 120.00037 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00169 * 179.97438 * 10 8 7 12 12 C 1.52996 * 109.46993 * 180.02562 * 11 10 8 13 13 C 1.53002 * 109.46972 * 179.97438 * 12 11 10 14 14 H 1.09003 * 112.84871 * 316.19987 * 13 12 11 15 15 C 1.53780 * 113.61143 * 87.50496 * 13 12 11 16 16 C 1.53781 * 87.08291 * 139.98302 * 15 13 12 17 17 H 1.08998 * 113.61095 * 220.01762 * 16 15 13 18 18 F 1.39902 * 113.61516 * 89.11206 * 16 15 13 19 19 C 1.53776 * 113.61452 * 184.99909 * 13 12 11 20 20 C 1.38759 * 119.94047 * 359.51127 * 5 4 3 21 21 C 1.50698 * 119.97323 * 180.27745 * 20 5 4 22 22 O 1.42892 * 109.47035 * 74.99823 * 21 20 5 23 23 Si 1.86294 * 109.47276 * 195.00394 * 21 20 5 24 24 C 1.38202 * 120.05525 * 0.25574 * 20 5 4 25 25 C 1.38150 * 120.10827 * 359.97438 * 24 20 5 26 26 H 1.08992 * 109.47487 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47278 * 300.00481 * 1 2 3 28 28 H 1.09010 * 109.46761 * 60.00224 * 1 2 3 29 29 H 1.08000 * 120.05555 * 359.97019 * 4 3 2 30 30 H 1.09004 * 109.47054 * 299.99725 * 7 6 5 31 31 H 1.09000 * 109.47187 * 59.99780 * 7 6 5 32 32 H 0.96996 * 119.99844 * 0.02562 * 10 8 7 33 33 H 1.09004 * 109.47042 * 300.00295 * 11 10 8 34 34 H 1.09004 * 109.46923 * 59.99881 * 11 10 8 35 35 H 1.08996 * 109.47452 * 300.00215 * 12 11 10 36 36 H 1.09000 * 109.47054 * 60.00055 * 12 11 10 37 37 H 1.09000 * 113.61178 * 254.52965 * 15 13 12 38 38 H 1.08997 * 113.61918 * 25.42912 * 15 13 12 39 39 H 1.09001 * 113.61656 * 334.57234 * 19 13 12 40 40 H 1.09005 * 113.61189 * 105.47351 * 19 13 12 41 41 H 1.09004 * 109.46938 * 315.00432 * 21 20 5 42 42 H 0.96702 * 113.99948 * 179.97438 * 22 21 20 43 43 H 1.48510 * 109.99673 * 299.99857 * 23 21 20 44 44 H 1.48505 * 110.00380 * 61.31431 * 23 21 20 45 45 H 1.07997 * 119.94276 * 179.97438 * 24 20 5 46 46 H 1.08005 * 119.97242 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 3.4302 1.2839 -0.0058 5 6 4.0569 2.5208 -0.0014 6 8 5.4138 2.5958 -0.0027 7 6 6.1317 1.3602 -0.0025 8 6 7.6126 1.6397 -0.0047 9 8 8.0136 2.7843 -0.0067 10 7 8.4913 0.6177 -0.0045 11 6 9.9309 0.8895 -0.0072 12 6 10.6995 -0.4334 -0.0069 13 6 12.2030 -0.1496 -0.0103 14 1 12.4830 0.6403 -0.7073 15 6 12.7997 0.0269 1.3959 16 6 14.0143 -0.7725 0.8953 17 1 14.4055 -1.4774 1.6288 18 9 15.0105 0.0235 0.3197 19 6 13.0684 -1.4148 -0.1331 20 6 3.2973 3.6820 -0.0015 21 6 3.9777 5.0267 -0.0031 22 8 4.5027 5.2933 -1.3050 23 14 2.7447 6.3470 0.4518 24 6 1.9174 3.6065 -0.0007 25 6 1.2907 2.3753 -0.0002 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8901 29 1 4.0197 0.3790 -0.0098 30 1 5.8708 0.7884 0.8881 31 1 5.8691 0.7872 -0.8919 32 1 8.1705 -0.2976 -0.0032 33 1 10.1912 1.4604 -0.8985 34 1 10.1939 1.4632 0.8815 35 1 10.4393 -1.0047 0.8841 36 1 10.4363 -1.0067 -0.8958 37 1 13.0312 1.0624 1.6452 38 1 12.2344 -0.4813 2.1771 39 1 12.5765 -2.3172 0.2300 40 1 13.5168 -1.5432 -1.1183 41 1 4.7909 5.0233 0.7228 42 1 4.9551 6.1447 -1.3799 43 1 1.6309 6.3619 -0.5304 44 1 2.2149 6.0988 1.8167 45 1 1.3280 4.5114 -0.0003 46 1 0.2122 2.3188 0.0000 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_4974312.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:15 Heat of formation + Delta-G solvation = -134.972826 kcal Electronic energy + Delta-G solvation = -28835.444110 eV Core-core repulsion = 24415.042840 eV Total energy + Delta-G solvation = -4420.401270 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.156 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -48.67218 -41.92337 -40.94207 -39.96637 -39.33971 -38.25658 -37.06001 -36.16389 -32.56501 -32.31657 -31.38984 -29.39643 -28.45983 -26.83637 -26.12569 -25.82055 -23.80478 -22.82336 -22.48002 -21.73443 -20.42916 -20.00279 -18.59987 -18.41030 -17.95152 -17.57971 -17.44661 -17.23861 -16.89516 -16.87674 -16.79049 -16.53039 -16.33315 -15.88484 -15.68701 -15.61471 -15.29237 -15.18093 -14.66611 -14.54775 -14.11539 -13.88665 -13.81591 -13.66397 -13.48338 -13.41210 -13.25587 -13.10097 -12.61795 -12.53296 -12.47508 -12.01834 -11.95984 -11.94093 -11.81171 -11.75338 -11.24658 -11.16312 -10.89842 -10.24384 -10.22966 -9.84601 -9.24140 -4.94755 0.02172 0.15458 1.29805 1.37874 1.39833 1.63097 1.91084 2.12626 2.39503 2.51743 3.28597 3.34924 3.43049 3.50980 3.56161 3.61040 3.72683 3.84251 3.86235 3.87533 3.97912 3.99322 4.08705 4.11144 4.18119 4.24378 4.27925 4.31573 4.32624 4.43835 4.51175 4.59410 4.69065 4.73042 4.74293 4.83003 4.86726 4.92854 5.02870 5.06606 5.11400 5.12536 5.18393 5.28015 5.32055 5.49804 6.01686 6.22612 6.40608 6.89974 7.08031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.324 6.324 3 C 0.167 3.833 4 C -0.247 4.247 5 C 0.180 3.820 6 O -0.298 6.298 7 C 0.032 3.968 8 C 0.513 3.487 9 O -0.569 6.569 10 N -0.709 5.709 11 C 0.120 3.880 12 C -0.107 4.107 13 C -0.110 4.110 14 H 0.081 0.919 15 C -0.157 4.157 16 C 0.043 3.957 17 H 0.113 0.887 18 F -0.222 7.222 19 C -0.148 4.148 20 C -0.167 4.167 21 C -0.075 4.075 22 O -0.564 6.564 23 Si 0.779 3.221 24 C -0.057 4.057 25 C -0.241 4.241 26 H 0.122 0.878 27 H 0.067 0.933 28 H 0.065 0.935 29 H 0.163 0.837 30 H 0.126 0.874 31 H 0.121 0.879 32 H 0.422 0.578 33 H 0.052 0.948 34 H 0.058 0.942 35 H 0.095 0.905 36 H 0.087 0.913 37 H 0.066 0.934 38 H 0.121 0.879 39 H 0.124 0.876 40 H 0.073 0.927 41 H 0.066 0.934 42 H 0.396 0.604 43 H -0.279 1.279 44 H -0.284 1.284 45 H 0.135 0.865 46 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.664 -6.114 2.183 7.018 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.237 6.237 3 C 0.120 3.880 4 C -0.266 4.266 5 C 0.134 3.866 6 O -0.210 6.210 7 C -0.045 4.045 8 C 0.298 3.702 9 O -0.447 6.447 10 N -0.364 5.364 11 C -0.003 4.003 12 C -0.144 4.144 13 C -0.129 4.129 14 H 0.099 0.901 15 C -0.195 4.195 16 C 0.007 3.993 17 H 0.131 0.869 18 F -0.203 7.203 19 C -0.185 4.185 20 C -0.168 4.168 21 C -0.183 4.183 22 O -0.373 6.373 23 Si 0.683 3.317 24 C -0.074 4.074 25 C -0.259 4.259 26 H 0.141 0.859 27 H 0.085 0.915 28 H 0.084 0.916 29 H 0.181 0.819 30 H 0.143 0.857 31 H 0.138 0.862 32 H 0.259 0.741 33 H 0.071 0.929 34 H 0.076 0.924 35 H 0.113 0.887 36 H 0.106 0.894 37 H 0.085 0.915 38 H 0.139 0.861 39 H 0.142 0.858 40 H 0.092 0.908 41 H 0.084 0.916 42 H 0.246 0.754 43 H -0.206 1.206 44 H -0.211 1.211 45 H 0.152 0.848 46 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -3.192 -5.727 2.269 6.938 hybrid contribution 0.073 -0.678 -0.162 0.701 sum -3.118 -6.405 2.107 7.429 Atomic orbital electron populations 1.23423 0.75986 1.05968 1.02491 1.86056 1.23744 1.26042 1.87857 1.18805 0.91764 0.84768 0.92639 1.20628 0.93254 0.97601 1.15132 1.18498 0.82095 0.92875 0.93162 1.86198 1.14930 1.31931 1.87958 1.22798 0.88636 0.86352 1.06761 1.20400 0.88396 0.85284 0.76083 1.90765 1.80748 1.23236 1.49930 1.45680 1.06297 1.09591 1.74785 1.21392 0.78512 0.98846 1.01548 1.21692 0.92600 0.95356 1.04756 1.22476 0.94569 0.98484 0.97379 0.90092 1.23730 0.96134 1.01434 0.98178 1.22744 0.86023 0.93246 0.97297 0.86943 1.92776 1.64186 1.76635 1.86711 1.23617 0.96416 0.98722 0.99781 1.18945 0.92876 0.93421 1.11597 1.24800 1.04945 0.99935 0.88641 1.86446 1.77535 1.44169 1.29167 0.94104 0.76541 0.84898 0.76170 1.20754 0.92603 0.98251 0.95827 1.21342 1.01602 0.91273 1.11712 0.85940 0.91466 0.91614 0.81915 0.85667 0.86173 0.74053 0.92939 0.92360 0.88688 0.89419 0.91470 0.86083 0.85775 0.90806 0.91637 0.75364 1.20645 1.21096 0.84799 0.82723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.32 -0.91 10.49 -92.39 -0.97 -1.88 16 3 C 0.17 0.85 6.68 22.49 0.15 1.00 16 4 C -0.25 -1.17 8.97 22.46 0.20 -0.97 16 5 C 0.18 1.59 6.66 22.49 0.15 1.74 16 6 O -0.30 -2.85 8.99 -73.30 -0.66 -3.51 16 7 C 0.03 0.00 5.22 71.24 0.37 0.37 16 8 C 0.51 2.29 7.91 87.66 0.69 2.98 16 9 O -0.57 -9.04 16.50 16.00 0.26 -8.77 16 10 N -0.71 2.56 5.56 -463.05 -2.57 -0.01 16 11 C 0.12 -0.25 5.66 86.38 0.49 0.24 16 12 C -0.11 0.88 5.16 30.59 0.16 1.04 16 13 C -0.11 0.51 3.63 -10.27 -0.04 0.47 16 14 H 0.08 -0.07 8.13 -2.39 -0.02 -0.09 16 15 C -0.16 0.67 7.53 31.12 0.23 0.90 16 16 C 0.04 -0.09 5.69 31.12 0.18 0.09 16 17 H 0.11 -0.64 8.14 -2.39 -0.02 -0.66 16 18 F -0.22 -1.40 17.38 44.97 0.78 -0.62 16 19 C -0.15 0.84 7.54 31.12 0.23 1.07 16 20 C -0.17 -1.65 5.31 -19.75 -0.10 -1.76 16 21 C -0.07 -0.53 2.36 71.24 0.17 -0.37 16 22 O -0.56 -4.66 12.86 -148.98 -1.92 -6.58 16 23 Si 0.78 1.24 30.19 68.60 2.07 3.31 16 24 C -0.06 -0.42 8.65 22.24 0.19 -0.23 16 25 C -0.24 -1.12 9.04 22.38 0.20 -0.91 16 26 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 27 H 0.07 -0.38 7.66 -2.39 -0.02 -0.40 16 28 H 0.07 -0.35 7.66 -2.38 -0.02 -0.37 16 29 H 0.16 -0.22 6.30 -2.91 -0.02 -0.24 16 30 H 0.13 -0.80 7.67 -2.38 -0.02 -0.82 16 31 H 0.12 -0.62 7.65 -2.39 -0.02 -0.64 16 32 H 0.42 -4.88 8.47 -92.71 -0.79 -5.66 16 33 H 0.05 0.11 8.14 -2.38 -0.02 0.09 16 34 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 35 H 0.09 -1.11 7.84 -2.39 -0.02 -1.13 16 36 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 37 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 38 H 0.12 -1.04 7.90 -2.39 -0.02 -1.05 16 39 H 0.12 -1.29 8.10 -2.39 -0.02 -1.31 16 40 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 41 H 0.07 0.50 7.82 -2.38 -0.02 0.49 16 42 H 0.40 -0.65 8.74 -74.06 -0.65 -1.30 16 43 H -0.28 -1.68 6.75 99.48 0.67 -1.01 16 44 H -0.28 -1.75 7.11 99.48 0.71 -1.04 16 45 H 0.13 0.75 4.89 -2.91 -0.01 0.74 16 46 H 0.16 -0.10 6.29 -2.91 -0.02 -0.12 16 Total: 0.00 -29.08 383.77 0.98 -28.10 By element: Atomic # 1 Polarization: -16.35 SS G_CDS: -0.41 Total: -16.76 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: 4.39 Total: 6.71 kcal Atomic # 7 Polarization: 2.56 SS G_CDS: -2.57 Total: -0.01 kcal Atomic # 8 Polarization: -17.46 SS G_CDS: -3.28 Total: -20.74 kcal Atomic # 9 Polarization: -1.40 SS G_CDS: 0.78 Total: -0.62 kcal Atomic # 14 Polarization: 1.24 SS G_CDS: 2.07 Total: 3.31 kcal Total: -29.08 0.98 -28.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_4974312.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.876 kcal (2) G-P(sol) polarization free energy of solvation -29.081 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.097 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.973 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds