Wall clock time and date at job start Tue Mar 9 2021 12:58:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86301 * 109.47131 * 2 1 4 4 C 1.50698 * 109.47016 * 120.00310 * 2 1 3 5 5 C 1.35452 * 125.56221 * 244.97095 * 4 2 1 6 6 C 1.39831 * 107.86437 * 180.02562 * 5 4 2 7 7 C 1.37870 * 107.08661 * 0.02562 * 6 5 4 8 8 C 1.46680 * 126.23401 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00097 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99703 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99665 * 179.72441 * 10 8 7 12 12 C 1.53004 * 109.47198 * 180.27868 * 11 10 8 13 13 C 1.52997 * 109.47000 * 179.97438 * 12 11 10 14 14 H 1.08993 * 112.85499 * 316.19661 * 13 12 11 15 15 C 1.53788 * 113.61229 * 87.50576 * 13 12 11 16 16 C 1.53784 * 87.07938 * 139.97682 * 15 13 12 17 17 H 1.09006 * 113.61043 * 220.01348 * 16 15 13 18 18 F 1.39906 * 113.61408 * 89.11809 * 16 15 13 19 19 C 1.53782 * 87.08293 * 334.56621 * 16 15 13 20 20 N 1.35531 * 125.56586 * 65.32618 * 4 2 1 21 21 H 0.96700 * 113.99564 * 299.99742 * 1 2 3 22 22 H 1.09001 * 109.47106 * 240.00367 * 2 1 3 23 23 H 1.48495 * 110.00007 * 178.67858 * 3 2 1 24 24 H 1.48498 * 110.00176 * 300.00188 * 3 2 1 25 25 H 1.08005 * 126.06566 * 0.07424 * 5 4 2 26 26 H 1.08001 * 126.45914 * 180.02562 * 6 5 4 27 27 H 0.97001 * 120.00485 * 0.02562 * 10 8 7 28 28 H 1.09009 * 109.47454 * 300.27637 * 11 10 8 29 29 H 1.08998 * 109.47492 * 60.27932 * 11 10 8 30 30 H 1.08995 * 109.46638 * 300.00121 * 12 11 10 31 31 H 1.09006 * 109.47139 * 60.00254 * 12 11 10 32 32 H 1.08999 * 113.61354 * 254.52580 * 15 13 12 33 33 H 1.09000 * 113.61649 * 25.42826 * 15 13 12 34 34 H 1.08993 * 113.61119 * 270.88226 * 19 16 15 35 35 H 1.08996 * 113.61222 * 139.98374 * 19 16 15 36 36 H 0.97003 * 125.68075 * 0.02562 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6335 -0.1395 2.2383 6 6 2.9084 -1.1312 3.1850 7 6 2.3544 -2.3035 2.7162 8 6 2.3960 -3.6094 3.3829 9 8 2.9598 -3.7277 4.4548 10 7 1.8098 -4.6783 2.8081 11 6 1.8566 -5.9839 3.4710 12 6 1.1279 -7.0188 2.6114 13 6 1.1773 -8.3824 3.3035 14 1 2.1602 -8.6135 3.7137 15 6 0.0243 -8.6121 4.2949 16 6 -0.0366 -10.0556 3.7681 17 1 -1.0517 -10.4349 3.6502 18 9 0.7984 -10.9402 4.4593 19 6 0.5770 -9.5218 2.4629 20 7 1.7602 -2.0264 1.5059 21 1 -0.3932 0.4417 0.7651 22 1 1.7924 -0.5138 -0.8900 23 1 3.5346 1.7703 0.0322 24 1 1.5615 2.4679 -1.2084 25 1 2.9279 0.8978 2.3001 26 1 3.4523 -1.0031 4.1092 27 1 1.3608 -4.5841 1.9535 28 1 2.8952 -6.2876 3.6028 29 1 1.3720 -5.9145 4.4449 30 1 0.0894 -6.7151 2.4797 31 1 1.6125 -7.0883 1.6375 32 1 0.3263 -8.5410 5.3398 33 1 -0.8677 -8.0274 4.0704 34 1 -0.1639 -9.1858 1.7376 35 1 1.3252 -10.1851 2.0289 36 1 1.2950 -2.6662 0.9444 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_6580494.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:30 Heat of formation + Delta-G solvation = -54.837205 kcal Electronic energy + Delta-G solvation = -19799.552376 eV Core-core repulsion = 16393.865899 eV Total energy + Delta-G solvation = -3405.686477 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.63809 -42.52695 -40.36388 -39.43950 -37.80982 -36.17708 -32.67754 -31.88781 -31.09212 -27.35864 -26.98769 -25.72367 -23.35289 -22.83344 -21.56772 -21.13212 -20.61295 -19.86814 -18.19146 -17.43429 -17.08989 -16.91996 -16.63864 -16.55296 -16.14193 -15.94801 -15.52243 -15.20422 -15.09438 -14.81943 -14.41915 -14.28632 -14.00015 -13.90229 -13.67861 -13.65588 -13.23669 -12.70341 -12.27897 -12.19012 -12.09607 -11.97071 -11.38006 -11.32931 -11.06450 -10.76560 -10.26023 -10.09714 -9.28259 -5.08382 0.34626 1.08773 1.51982 1.61873 1.81569 1.98324 2.12351 2.37794 3.11217 3.15506 3.25343 3.41569 3.50711 3.51246 3.66765 3.74675 3.94441 4.08439 4.17337 4.23508 4.25390 4.38129 4.39668 4.47183 4.59870 4.64172 4.74945 4.85505 4.91514 4.95880 4.98415 5.06918 5.23680 5.31290 5.57281 5.80502 6.17126 6.34012 6.38531 7.09700 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.056 4.056 3 Si 0.722 3.278 4 C 0.021 3.979 5 C -0.199 4.199 6 C -0.098 4.098 7 C -0.052 4.052 8 C 0.589 3.411 9 O -0.523 6.523 10 N -0.734 5.734 11 C 0.120 3.880 12 C -0.121 4.121 13 C -0.107 4.107 14 H 0.100 0.900 15 C -0.160 4.160 16 C 0.061 3.939 17 H 0.097 0.903 18 F -0.197 7.197 19 C -0.158 4.158 20 N -0.524 5.524 21 H 0.384 0.616 22 H 0.114 0.886 23 H -0.253 1.253 24 H -0.254 1.254 25 H 0.152 0.848 26 H 0.153 0.847 27 H 0.394 0.606 28 H 0.072 0.928 29 H 0.073 0.927 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.082 0.918 33 H 0.100 0.900 34 H 0.100 0.900 35 H 0.082 0.918 36 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.740 1.737 -2.918 5.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.166 4.166 3 Si 0.621 3.379 4 C -0.097 4.097 5 C -0.223 4.223 6 C -0.124 4.124 7 C -0.165 4.165 8 C 0.376 3.624 9 O -0.398 6.398 10 N -0.386 5.386 11 C -0.003 4.003 12 C -0.159 4.159 13 C -0.126 4.126 14 H 0.118 0.882 15 C -0.198 4.198 16 C 0.025 3.975 17 H 0.115 0.885 18 F -0.177 7.177 19 C -0.195 4.195 20 N -0.120 5.120 21 H 0.232 0.768 22 H 0.131 0.869 23 H -0.177 1.177 24 H -0.178 1.178 25 H 0.169 0.831 26 H 0.171 0.829 27 H 0.227 0.773 28 H 0.090 0.910 29 H 0.091 0.909 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.101 0.899 33 H 0.118 0.882 34 H 0.118 0.882 35 H 0.100 0.900 36 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -2.806 1.737 -3.148 4.561 hybrid contribution -0.330 -1.100 -0.818 1.410 sum -3.136 0.637 -3.965 5.096 Atomic orbital electron populations 1.86501 1.16974 1.81796 1.49639 1.24962 0.85254 1.11087 0.95269 0.93992 0.81106 0.75909 0.86873 1.21157 1.04796 0.84197 0.99542 1.20716 1.06054 1.00183 0.95392 1.21345 1.00706 0.90125 1.00240 1.20469 1.09885 0.95926 0.90224 1.17057 0.78526 0.82140 0.84642 1.90883 1.43689 1.84421 1.20850 1.45904 1.58218 1.09498 1.24948 1.21420 1.01541 0.80885 0.96491 1.21780 1.01191 0.93727 0.99181 1.22511 0.99521 0.93823 0.96725 0.88187 1.23693 0.99725 0.95418 1.00917 1.22376 0.93414 0.88715 0.92981 0.88532 1.92833 1.74026 1.70192 1.80681 1.23615 1.01371 0.98016 0.96525 1.41948 1.43428 1.09252 1.17412 0.76822 0.86858 1.17694 1.17834 0.83061 0.82903 0.77259 0.90989 0.90877 0.90839 0.90811 0.89880 0.88180 0.88203 0.89957 0.74689 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.92 12.88 -35.23 -0.45 0.46 16 2 C -0.06 0.11 3.08 36.00 0.11 0.22 16 3 Si 0.72 -1.80 30.56 -169.99 -5.19 -7.00 16 4 C 0.02 -0.02 6.46 -81.95 -0.53 -0.55 16 5 C -0.20 0.07 9.32 -39.98 -0.37 -0.31 16 6 C -0.10 -0.15 10.65 -39.12 -0.42 -0.57 16 7 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 8 C 0.59 1.52 7.79 -12.85 -0.10 1.42 16 9 O -0.52 -3.44 16.88 5.20 0.09 -3.35 16 10 N -0.73 0.59 5.55 -61.61 -0.34 0.24 16 11 C 0.12 -0.11 5.66 -4.04 -0.02 -0.13 16 12 C -0.12 0.39 5.16 -26.73 -0.14 0.25 16 13 C -0.11 0.23 3.63 -89.80 -0.33 -0.09 16 14 H 0.10 -0.12 8.13 -51.93 -0.42 -0.54 16 15 C -0.16 0.32 7.53 -25.91 -0.20 0.13 16 16 C 0.06 -0.06 5.69 -25.92 -0.15 -0.21 16 17 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 18 F -0.20 -0.49 17.38 2.25 0.04 -0.45 16 19 C -0.16 0.37 7.54 -25.92 -0.20 0.17 16 20 N -0.52 0.57 5.99 -5.70 -0.03 0.53 16 21 H 0.38 -1.97 8.70 45.56 0.40 -1.58 16 22 H 0.11 -0.22 7.96 -51.93 -0.41 -0.63 16 23 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 24 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 25 H 0.15 -0.38 6.19 -52.48 -0.32 -0.70 16 26 H 0.15 0.20 8.06 -52.49 -0.42 -0.22 16 27 H 0.39 -1.42 7.60 -40.82 -0.31 -1.73 16 28 H 0.07 0.02 8.14 -51.92 -0.42 -0.40 16 29 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 30 H 0.07 -0.30 7.84 -51.93 -0.41 -0.70 16 31 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 32 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 33 H 0.10 -0.34 7.90 -51.93 -0.41 -0.75 16 34 H 0.10 -0.38 8.10 -51.93 -0.42 -0.80 16 35 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.42 -1.44 8.19 -40.82 -0.33 -1.77 16 LS Contribution 310.55 15.07 4.68 4.68 Total: 0.00 -8.33 310.55 -8.93 -17.27 By element: Atomic # 1 Polarization: -7.27 SS G_CDS: -4.80 Total: -12.07 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -2.91 Total: -0.32 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -0.38 Total: 0.78 kcal Atomic # 8 Polarization: -2.52 SS G_CDS: -0.37 Total: -2.89 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.19 Total: -7.00 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -8.33 -8.93 -17.27 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_6580494.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.570 kcal (2) G-P(sol) polarization free energy of solvation -8.335 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.267 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.837 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds