Wall clock time and date at job start Tue Mar 9 2021 12:58:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.33811 * 122.45353 * 2 1 4 4 C 1.50701 * 124.52034 * 0.05993 * 3 2 1 5 5 O 1.42901 * 109.47311 * 246.53987 * 4 3 2 6 6 Si 1.86303 * 109.47021 * 126.54183 * 4 3 2 7 7 S 1.70616 * 110.95904 * 179.74890 * 3 2 1 8 8 C 1.75839 * 91.56197 * 0.35551 * 7 3 2 9 9 C 1.46582 * 125.45715 * 179.91420 * 8 7 3 10 10 O 1.21699 * 119.99634 * 179.69454 * 9 8 7 11 11 N 1.34770 * 120.00164 * 359.69131 * 9 8 7 12 12 C 1.46504 * 120.00193 * 180.02562 * 11 9 8 13 13 C 1.52993 * 109.47378 * 180.02562 * 12 11 9 14 14 C 1.52997 * 109.47195 * 180.02562 * 13 12 11 15 15 H 1.09005 * 112.90714 * 316.24793 * 14 13 12 16 16 C 1.53782 * 113.61805 * 87.49861 * 14 13 12 17 17 C 1.53780 * 87.08158 * 139.98196 * 16 14 13 18 18 H 1.09005 * 113.61298 * 220.02484 * 17 16 14 19 19 F 1.39894 * 113.61563 * 89.11837 * 17 16 14 20 20 C 1.53784 * 113.61514 * 184.99919 * 14 13 12 21 21 C 1.36646 * 109.07915 * 359.64730 * 8 7 3 22 22 H 1.09003 * 109.46630 * 274.96475 * 1 2 3 23 23 H 1.09000 * 109.47266 * 34.96318 * 1 2 3 24 24 H 1.08996 * 109.47753 * 154.97119 * 1 2 3 25 25 H 1.08997 * 109.47009 * 6.54527 * 4 3 2 26 26 H 0.96698 * 113.99980 * 179.97438 * 5 4 3 27 27 H 1.48501 * 109.99826 * 60.00457 * 6 4 3 28 28 H 1.48503 * 109.99863 * 181.31583 * 6 4 3 29 29 H 0.97002 * 120.00536 * 0.02562 * 11 9 8 30 30 H 1.09004 * 109.46660 * 59.99744 * 12 11 9 31 31 H 1.09005 * 109.46906 * 300.00624 * 12 11 9 32 32 H 1.08997 * 109.47250 * 59.99562 * 13 12 11 33 33 H 1.09002 * 109.46889 * 300.00090 * 13 12 11 34 34 H 1.08997 * 113.61690 * 254.53373 * 16 14 13 35 35 H 1.08999 * 113.61068 * 25.34969 * 16 14 13 36 36 H 1.08995 * 113.61390 * 334.56820 * 20 14 13 37 37 H 1.08997 * 113.61315 * 105.47137 * 20 14 13 38 38 H 1.07997 * 123.35026 * 180.28336 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2250 1.1291 0.0000 4 6 1.6355 2.5161 0.0013 5 8 1.9417 3.1650 -1.2345 6 14 2.3564 3.4959 1.4124 7 16 3.8969 0.7892 0.0070 8 6 3.5937 -0.9429 -0.0010 9 6 4.6231 -1.9864 -0.0016 10 8 4.3001 -3.1597 -0.0017 11 7 5.9272 -1.6464 -0.0020 12 6 6.9561 -2.6894 -0.0032 13 6 8.3411 -2.0395 -0.0028 14 6 9.4156 -3.1287 -0.0046 15 1 9.1975 -3.9410 0.6887 16 6 9.8040 -3.6086 -1.4131 17 6 11.2582 -3.6446 -0.9143 18 1 11.9803 -3.2850 -1.6475 19 9 11.6248 -4.8681 -0.3437 20 6 10.8476 -2.5816 0.1184 21 6 2.2446 -1.1601 -0.0005 22 1 -0.3633 0.0889 1.0239 23 1 -0.3634 0.8422 -0.5889 24 1 -0.3634 -0.9311 -0.4347 25 1 0.5539 2.4510 0.1194 26 1 1.5922 4.0639 -1.3039 27 1 3.8307 3.5919 1.2631 28 1 1.7596 4.8553 1.4439 29 1 6.1847 -0.7112 -0.0015 30 1 6.8449 -3.3083 -0.8935 31 1 6.8458 -3.3095 0.8865 32 1 8.4519 -1.4208 0.8877 33 1 8.4516 -1.4191 -0.8922 34 1 9.4044 -4.5908 -1.6654 35 1 9.6262 -2.8666 -2.1916 36 1 10.9565 -1.5585 -0.2412 37 1 11.2905 -2.7349 1.1024 38 1 1.8018 -2.1452 -0.0002 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_6739946.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:35 Heat of formation + Delta-G solvation = -70.919399 kcal Electronic energy + Delta-G solvation = -21304.051155 eV Core-core repulsion = 17768.481699 eV Total energy + Delta-G solvation = -3535.569456 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.098 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -48.60418 -40.83561 -39.76679 -39.33630 -37.71644 -36.05954 -32.84326 -31.64626 -29.99277 -27.33896 -26.92996 -25.50264 -24.04863 -22.90565 -21.74647 -20.56514 -19.97664 -19.12206 -18.66323 -17.53107 -17.38800 -16.94145 -16.77581 -16.54664 -15.96450 -15.90584 -15.76796 -15.40156 -15.13030 -14.71825 -14.50563 -14.40076 -14.05017 -13.82405 -13.64669 -13.39095 -13.23604 -13.17387 -12.99366 -12.71509 -12.64020 -12.24115 -12.12341 -11.92475 -11.84000 -11.31895 -11.24417 -10.96359 -10.81826 -10.18754 -9.66151 -9.41647 -5.13685 -0.60165 0.35995 0.80104 1.03542 1.27358 1.41708 1.78274 2.04855 2.22213 3.05417 3.15908 3.20447 3.46760 3.55845 3.64037 3.70268 3.75706 3.99162 4.09225 4.12727 4.16202 4.30514 4.36331 4.45539 4.46021 4.52257 4.64794 4.66590 4.68790 4.78424 4.84862 4.90306 4.96293 4.98501 5.03071 5.26502 5.31806 5.36164 5.38543 6.23075 6.36701 7.12909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C -0.097 4.097 3 C -0.187 4.187 4 C -0.043 4.043 5 O -0.533 6.533 6 Si 0.669 3.331 7 S 0.209 5.791 8 C -0.265 4.265 9 C 0.592 3.408 10 O -0.525 6.525 11 N -0.729 5.729 12 C 0.120 3.880 13 C -0.122 4.122 14 C -0.107 4.107 15 H 0.100 0.900 16 C -0.160 4.160 17 C 0.061 3.939 18 H 0.097 0.903 19 F -0.197 7.197 20 C -0.157 4.157 21 C -0.046 4.046 22 H 0.077 0.923 23 H 0.069 0.931 24 H 0.072 0.928 25 H 0.089 0.911 26 H 0.384 0.616 27 H -0.239 1.239 28 H -0.245 1.245 29 H 0.398 0.602 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.075 0.925 33 H 0.074 0.926 34 H 0.082 0.918 35 H 0.100 0.900 36 H 0.100 0.900 37 H 0.082 0.918 38 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.870 5.388 1.476 5.654 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.111 4.111 3 C -0.306 4.306 4 C -0.155 4.155 5 O -0.341 6.341 6 Si 0.567 3.433 7 S 0.479 5.521 8 C -0.386 4.386 9 C 0.378 3.622 10 O -0.402 6.402 11 N -0.381 5.381 12 C -0.003 4.003 13 C -0.160 4.160 14 C -0.125 4.125 15 H 0.118 0.882 16 C -0.198 4.198 17 C 0.025 3.975 18 H 0.114 0.886 19 F -0.178 7.178 20 C -0.195 4.195 21 C -0.079 4.079 22 H 0.096 0.904 23 H 0.088 0.912 24 H 0.091 0.909 25 H 0.107 0.893 26 H 0.232 0.768 27 H -0.163 1.163 28 H -0.169 1.169 29 H 0.232 0.768 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.094 0.906 33 H 0.092 0.908 34 H 0.101 0.899 35 H 0.118 0.882 36 H 0.118 0.882 37 H 0.101 0.899 38 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 1.036 5.556 1.619 5.879 hybrid contribution -1.492 0.191 -1.009 1.811 sum -0.455 5.747 0.611 5.797 Atomic orbital electron populations 1.20602 0.88963 1.03378 1.02857 1.18660 0.98145 0.90676 1.03572 1.23172 0.98385 0.98084 1.10991 1.24172 1.03134 0.92779 0.95369 1.86615 1.80231 1.32537 1.34757 0.94737 0.81793 0.81393 0.85402 1.82985 1.03635 0.97642 1.67830 1.24569 0.98106 0.97130 1.18749 1.16915 0.81564 0.87406 0.76269 1.90861 1.81610 1.18168 1.49582 1.45874 1.05568 1.10403 1.76251 1.21428 0.85618 0.90155 1.03102 1.21788 0.92796 0.98167 1.03232 1.22509 0.93832 0.98368 0.97830 0.88190 1.23694 0.94946 1.03600 0.97563 1.22374 0.97348 0.81435 0.96341 0.88562 1.92828 1.92856 1.45684 1.86391 1.23615 0.96115 0.99260 1.00504 1.20653 0.90866 0.99962 0.96411 0.90446 0.91194 0.90889 0.89286 0.76754 1.16304 1.16850 0.76775 0.90907 0.90903 0.90623 0.90768 0.89929 0.88167 0.88169 0.89949 0.82547 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.15 9.48 36.00 0.34 0.49 16 2 C -0.10 -0.07 5.78 -106.46 -0.62 -0.68 16 3 C -0.19 -0.14 4.86 -35.86 -0.17 -0.31 16 4 C -0.04 0.04 2.76 36.01 0.10 0.14 16 5 O -0.53 -0.02 12.86 -35.23 -0.45 -0.48 16 6 Si 0.67 -1.17 32.12 -169.99 -5.46 -6.63 16 7 S 0.21 0.14 20.82 -107.50 -2.24 -2.10 16 8 C -0.27 -0.60 6.45 -36.79 -0.24 -0.84 16 9 C 0.59 2.07 7.78 -12.90 -0.10 1.97 16 10 O -0.52 -3.69 16.84 5.19 0.09 -3.60 16 11 N -0.73 -0.37 5.55 -61.65 -0.34 -0.72 16 12 C 0.12 -0.03 5.66 -4.04 -0.02 -0.05 16 13 C -0.12 0.32 5.17 -26.74 -0.14 0.18 16 14 C -0.11 0.19 3.63 -89.81 -0.33 -0.13 16 15 H 0.10 -0.09 8.13 -51.93 -0.42 -0.51 16 16 C -0.16 0.26 7.53 -25.92 -0.20 0.07 16 17 C 0.06 -0.04 5.69 -25.92 -0.15 -0.19 16 18 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 19 F -0.20 -0.54 17.38 2.25 0.04 -0.50 16 20 C -0.16 0.32 7.54 -25.92 -0.20 0.12 16 21 C -0.05 -0.09 9.78 -40.43 -0.40 -0.48 16 22 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 23 H 0.07 -0.13 6.99 -51.93 -0.36 -0.49 16 24 H 0.07 -0.13 8.10 -51.93 -0.42 -0.55 16 25 H 0.09 -0.25 6.24 -51.93 -0.32 -0.57 16 26 H 0.38 -1.56 8.74 45.56 0.40 -1.16 16 27 H -0.24 -0.17 7.11 56.52 0.40 0.23 16 28 H -0.24 0.07 7.11 56.52 0.40 0.47 16 29 H 0.40 -0.64 7.59 -40.82 -0.31 -0.95 16 30 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 31 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 32 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.07 -0.24 7.84 -51.93 -0.41 -0.65 16 34 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 35 H 0.10 -0.29 7.89 -51.93 -0.41 -0.70 16 36 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 37 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.16 0.23 8.06 -52.49 -0.42 -0.19 16 LS Contribution 336.57 15.07 5.07 5.07 Total: 0.00 -7.58 336.57 -10.66 -18.24 By element: Atomic # 1 Polarization: -4.31 SS G_CDS: -5.26 Total: -9.57 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -2.11 Total: 0.28 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: -0.34 Total: -0.72 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -0.37 Total: -4.08 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.46 Total: -6.63 kcal Atomic # 16 Polarization: 0.14 SS G_CDS: -2.24 Total: -2.10 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -7.58 -10.66 -18.24 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_6739946.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.680 kcal (2) G-P(sol) polarization free energy of solvation -7.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.660 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds