Wall clock time and date at job start Tue Mar 9 2021 12:58:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.33811 * 122.45353 * 2 1 4 4 C 1.50701 * 124.52034 * 0.05993 * 3 2 1 5 5 O 1.42901 * 109.47311 * 246.53987 * 4 3 2 6 6 Si 1.86303 * 109.47021 * 126.54183 * 4 3 2 7 7 S 1.70616 * 110.95904 * 179.74890 * 3 2 1 8 8 C 1.75839 * 91.56197 * 0.35551 * 7 3 2 9 9 C 1.46582 * 125.45715 * 179.91420 * 8 7 3 10 10 O 1.21699 * 119.99634 * 179.69454 * 9 8 7 11 11 N 1.34770 * 120.00164 * 359.69131 * 9 8 7 12 12 C 1.46504 * 120.00193 * 180.02562 * 11 9 8 13 13 C 1.52993 * 109.47378 * 180.02562 * 12 11 9 14 14 C 1.52997 * 109.47195 * 180.02562 * 13 12 11 15 15 H 1.09005 * 112.90714 * 316.24793 * 14 13 12 16 16 C 1.53782 * 113.61805 * 87.49861 * 14 13 12 17 17 C 1.53780 * 87.08158 * 139.98196 * 16 14 13 18 18 H 1.09005 * 113.61298 * 220.02484 * 17 16 14 19 19 F 1.39894 * 113.61563 * 89.11837 * 17 16 14 20 20 C 1.53784 * 113.61514 * 184.99919 * 14 13 12 21 21 C 1.36646 * 109.07915 * 359.64730 * 8 7 3 22 22 H 1.09003 * 109.46630 * 274.96475 * 1 2 3 23 23 H 1.09000 * 109.47266 * 34.96318 * 1 2 3 24 24 H 1.08996 * 109.47753 * 154.97119 * 1 2 3 25 25 H 1.08997 * 109.47009 * 6.54527 * 4 3 2 26 26 H 0.96698 * 113.99980 * 179.97438 * 5 4 3 27 27 H 1.48501 * 109.99826 * 60.00457 * 6 4 3 28 28 H 1.48503 * 109.99863 * 181.31583 * 6 4 3 29 29 H 0.97002 * 120.00536 * 0.02562 * 11 9 8 30 30 H 1.09004 * 109.46660 * 59.99744 * 12 11 9 31 31 H 1.09005 * 109.46906 * 300.00624 * 12 11 9 32 32 H 1.08997 * 109.47250 * 59.99562 * 13 12 11 33 33 H 1.09002 * 109.46889 * 300.00090 * 13 12 11 34 34 H 1.08997 * 113.61690 * 254.53373 * 16 14 13 35 35 H 1.08999 * 113.61068 * 25.34969 * 16 14 13 36 36 H 1.08995 * 113.61390 * 334.56820 * 20 14 13 37 37 H 1.08997 * 113.61315 * 105.47137 * 20 14 13 38 38 H 1.07997 * 123.35026 * 180.28336 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2250 1.1291 0.0000 4 6 1.6355 2.5161 0.0013 5 8 1.9417 3.1650 -1.2345 6 14 2.3564 3.4959 1.4124 7 16 3.8969 0.7892 0.0070 8 6 3.5937 -0.9429 -0.0010 9 6 4.6231 -1.9864 -0.0016 10 8 4.3001 -3.1597 -0.0017 11 7 5.9272 -1.6464 -0.0020 12 6 6.9561 -2.6894 -0.0032 13 6 8.3411 -2.0395 -0.0028 14 6 9.4156 -3.1287 -0.0046 15 1 9.1975 -3.9410 0.6887 16 6 9.8040 -3.6086 -1.4131 17 6 11.2582 -3.6446 -0.9143 18 1 11.9803 -3.2850 -1.6475 19 9 11.6248 -4.8681 -0.3437 20 6 10.8476 -2.5816 0.1184 21 6 2.2446 -1.1601 -0.0005 22 1 -0.3633 0.0889 1.0239 23 1 -0.3634 0.8422 -0.5889 24 1 -0.3634 -0.9311 -0.4347 25 1 0.5539 2.4510 0.1194 26 1 1.5922 4.0639 -1.3039 27 1 3.8307 3.5919 1.2631 28 1 1.7596 4.8553 1.4439 29 1 6.1847 -0.7112 -0.0015 30 1 6.8449 -3.3083 -0.8935 31 1 6.8458 -3.3095 0.8865 32 1 8.4519 -1.4208 0.8877 33 1 8.4516 -1.4191 -0.8922 34 1 9.4044 -4.5908 -1.6654 35 1 9.6262 -2.8666 -2.1916 36 1 10.9565 -1.5585 -0.2412 37 1 11.2905 -2.7349 1.1024 38 1 1.8018 -2.1452 -0.0002 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_6739946.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:35 Heat of formation + Delta-G solvation = -68.189999 kcal Electronic energy + Delta-G solvation = -21303.932800 eV Core-core repulsion = 17768.481699 eV Total energy + Delta-G solvation = -3535.451100 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.098 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.68084 -41.02245 -39.74568 -39.30699 -37.67138 -36.21332 -32.90468 -31.61975 -29.91153 -27.34051 -26.80002 -25.47025 -24.06681 -22.85780 -21.88304 -20.47177 -19.99402 -19.20967 -18.59428 -17.56865 -17.38132 -16.95393 -16.85586 -16.59244 -16.01873 -15.88258 -15.79086 -15.43441 -15.18115 -14.73066 -14.51637 -14.40654 -14.00874 -13.83193 -13.51835 -13.33417 -13.17516 -13.13238 -12.96115 -12.66830 -12.58898 -12.22976 -12.00565 -11.88888 -11.82473 -11.41190 -11.20063 -10.98325 -10.75150 -10.34689 -9.71506 -9.43936 -4.98860 -0.70234 0.29758 0.75173 1.09043 1.25412 1.52190 1.87730 1.95292 2.02639 3.18934 3.27074 3.33338 3.58530 3.61317 3.71393 3.74497 3.84580 4.08472 4.09202 4.21013 4.23492 4.39905 4.40826 4.51924 4.56387 4.68447 4.72407 4.79847 4.81205 4.87941 4.91342 5.01197 5.01726 5.07588 5.14978 5.24634 5.29874 5.41769 5.48253 6.26575 6.51655 6.95146 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.101 4.101 3 C -0.194 4.194 4 C -0.050 4.050 5 O -0.554 6.554 6 Si 0.731 3.269 7 S 0.225 5.775 8 C -0.284 4.284 9 C 0.588 3.412 10 O -0.571 6.571 11 N -0.716 5.716 12 C 0.119 3.881 13 C -0.110 4.110 14 C -0.108 4.108 15 H 0.085 0.915 16 C -0.158 4.158 17 C 0.045 3.955 18 H 0.113 0.887 19 F -0.221 7.221 20 C -0.148 4.148 21 C -0.054 4.054 22 H 0.094 0.906 23 H 0.076 0.924 24 H 0.073 0.927 25 H 0.112 0.888 26 H 0.400 0.600 27 H -0.275 1.275 28 H -0.262 1.262 29 H 0.410 0.590 30 H 0.062 0.938 31 H 0.060 0.940 32 H 0.086 0.914 33 H 0.090 0.910 34 H 0.068 0.932 35 H 0.118 0.882 36 H 0.122 0.878 37 H 0.075 0.925 38 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.215 7.229 1.412 7.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.114 4.114 3 C -0.314 4.314 4 C -0.161 4.161 5 O -0.365 6.365 6 Si 0.633 3.367 7 S 0.495 5.505 8 C -0.405 4.405 9 C 0.375 3.625 10 O -0.452 6.452 11 N -0.367 5.367 12 C -0.004 4.004 13 C -0.147 4.147 14 C -0.127 4.127 15 H 0.103 0.897 16 C -0.196 4.196 17 C 0.009 3.991 18 H 0.131 0.869 19 F -0.202 7.202 20 C -0.185 4.185 21 C -0.088 4.088 22 H 0.112 0.888 23 H 0.095 0.905 24 H 0.092 0.908 25 H 0.130 0.870 26 H 0.252 0.748 27 H -0.201 1.201 28 H -0.187 1.187 29 H 0.246 0.754 30 H 0.080 0.920 31 H 0.079 0.921 32 H 0.105 0.895 33 H 0.109 0.891 34 H 0.087 0.913 35 H 0.137 0.863 36 H 0.140 0.860 37 H 0.094 0.906 38 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 0.701 7.431 1.553 7.624 hybrid contribution -1.369 -0.332 -1.013 1.735 sum -0.668 7.099 0.540 7.151 Atomic orbital electron populations 1.20682 0.87330 1.03731 1.04083 1.18845 0.99326 0.90072 1.03180 1.23499 0.98324 0.99082 1.10488 1.24372 1.04522 0.91839 0.95343 1.86566 1.80748 1.33989 1.35200 0.93968 0.78689 0.79761 0.84328 1.82853 1.04070 0.96026 1.67511 1.24547 0.98056 0.97922 1.19951 1.17185 0.82549 0.87071 0.75691 1.90827 1.82403 1.19939 1.52034 1.45824 1.04859 1.11275 1.74774 1.21467 0.86778 0.90116 1.02024 1.21717 0.90607 0.97854 1.04553 1.22469 0.94471 0.98280 0.97483 0.89706 1.23730 0.94264 1.03468 0.98108 1.22711 0.98261 0.80819 0.97298 0.86940 1.92775 1.93126 1.47414 1.86874 1.23613 0.95191 0.99886 0.99859 1.20816 0.91080 1.00459 0.96419 0.88765 0.90505 0.90832 0.87048 0.74821 1.20081 1.18695 0.75373 0.91997 0.92128 0.89498 0.89144 0.91295 0.86329 0.85973 0.90598 0.82949 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.40 9.48 71.23 0.68 1.08 16 2 C -0.10 -0.12 5.78 -21.05 -0.12 -0.24 16 3 C -0.19 -0.18 4.86 24.68 0.12 -0.06 16 4 C -0.05 0.16 2.76 71.24 0.20 0.36 16 5 O -0.55 0.55 12.86 -148.98 -1.92 -1.36 16 6 Si 0.73 -3.17 32.12 68.60 2.20 -0.97 16 7 S 0.23 0.30 20.82 -56.49 -1.18 -0.87 16 8 C -0.28 -1.57 6.45 24.08 0.16 -1.41 16 9 C 0.59 5.02 7.78 86.42 0.67 5.70 16 10 O -0.57 -9.43 16.84 -4.35 -0.07 -9.50 16 11 N -0.72 -1.26 5.55 -467.18 -2.59 -3.85 16 12 C 0.12 0.06 5.66 86.38 0.49 0.55 16 13 C -0.11 0.63 5.17 30.59 0.16 0.78 16 14 C -0.11 0.36 3.63 -10.27 -0.04 0.33 16 15 H 0.08 -0.03 8.13 -2.38 -0.02 -0.05 16 16 C -0.16 0.49 7.53 31.12 0.23 0.72 16 17 C 0.05 -0.06 5.69 31.12 0.18 0.12 16 18 H 0.11 -0.55 8.14 -2.38 -0.02 -0.57 16 19 F -0.22 -1.48 17.38 44.97 0.78 -0.70 16 20 C -0.15 0.68 7.54 31.12 0.23 0.92 16 21 C -0.05 -0.25 9.78 21.72 0.21 -0.04 16 22 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 23 H 0.08 -0.40 6.99 -2.39 -0.02 -0.42 16 24 H 0.07 -0.29 8.10 -2.39 -0.02 -0.31 16 25 H 0.11 -0.85 6.24 -2.39 -0.01 -0.86 16 26 H 0.40 -3.74 8.74 -74.06 -0.65 -4.39 16 27 H -0.27 -0.41 7.11 99.48 0.71 0.29 16 28 H -0.26 0.38 7.11 99.48 0.71 1.09 16 29 H 0.41 -1.36 7.59 -92.71 -0.70 -2.06 16 30 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 31 H 0.06 0.19 8.14 -2.38 -0.02 0.17 16 32 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 33 H 0.09 -0.76 7.84 -2.39 -0.02 -0.78 16 34 H 0.07 -0.02 8.14 -2.39 -0.02 -0.03 16 35 H 0.12 -0.82 7.89 -2.39 -0.02 -0.84 16 36 H 0.12 -1.09 8.10 -2.39 -0.02 -1.11 16 37 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 38 H 0.15 0.72 8.06 -2.91 -0.02 0.70 16 Total: 0.00 -19.24 336.57 0.17 -19.07 By element: Atomic # 1 Polarization: -10.39 SS G_CDS: -0.22 Total: -10.61 kcal Atomic # 6 Polarization: 5.63 SS G_CDS: 3.17 Total: 8.80 kcal Atomic # 7 Polarization: -1.26 SS G_CDS: -2.59 Total: -3.85 kcal Atomic # 8 Polarization: -8.88 SS G_CDS: -1.99 Total: -10.87 kcal Atomic # 9 Polarization: -1.48 SS G_CDS: 0.78 Total: -0.70 kcal Atomic # 14 Polarization: -3.17 SS G_CDS: 2.20 Total: -0.97 kcal Atomic # 16 Polarization: 0.30 SS G_CDS: -1.18 Total: -0.87 kcal Total: -19.24 0.17 -19.07 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_6739946.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.119 kcal (2) G-P(sol) polarization free energy of solvation -19.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.360 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.170 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.071 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds