Wall clock time and date at job start Tue Mar 9 2021 12:58:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38232 * 119.94053 * 300.00214 * 4 2 1 6 6 C 1.38196 * 120.07537 * 179.97438 * 5 4 2 7 7 C 1.38662 * 119.95869 * 0.02562 * 6 5 4 8 8 O 1.35927 * 120.05887 * 179.97438 * 7 6 5 9 9 C 1.42896 * 117.00169 * 0.02562 * 8 7 6 10 10 C 1.53000 * 109.47421 * 179.97438 * 9 8 7 11 11 N 1.46496 * 109.47251 * 179.97438 * 10 9 8 12 12 C 1.34815 * 126.59325 * 125.00209 * 11 10 9 13 13 C 1.36597 * 106.84277 * 179.97438 * 12 11 10 14 14 C 1.47527 * 125.77098 * 180.02562 * 13 12 11 15 15 O 1.21592 * 120.00060 * 359.97438 * 14 13 12 16 16 N 1.34773 * 119.99876 * 179.97438 * 14 13 12 17 17 C 1.46492 * 120.00027 * 179.97438 * 16 14 13 18 18 C 1.53007 * 109.47449 * 180.02562 * 17 16 14 19 19 C 1.53000 * 109.47185 * 179.97438 * 18 17 16 20 20 H 1.08995 * 112.84840 * 316.19542 * 19 18 17 21 21 C 1.53777 * 113.61034 * 87.50720 * 19 18 17 22 22 C 1.53781 * 87.07928 * 139.98133 * 21 19 18 23 23 H 1.09004 * 113.61193 * 220.01744 * 22 21 19 24 24 F 1.39893 * 113.61794 * 89.11501 * 22 21 19 25 25 C 1.53778 * 87.08258 * 334.56207 * 22 21 19 26 26 N 1.34401 * 108.45648 * 0.02562 * 13 12 11 27 27 N 1.28767 * 109.52229 * 359.74862 * 26 13 12 28 28 C 1.38852 * 119.88103 * 0.02562 * 7 6 5 29 29 Cl 1.73604 * 120.03790 * 180.02562 * 28 7 6 30 30 C 1.38212 * 119.92193 * 359.70089 * 28 7 6 31 31 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 32 32 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 33 33 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 34 34 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 35 35 H 1.07995 * 119.96202 * 359.97438 * 5 4 2 36 36 H 1.08007 * 120.02072 * 180.02562 * 6 5 4 37 37 H 1.09001 * 109.47049 * 299.99844 * 9 8 7 38 38 H 1.09005 * 109.47423 * 59.99916 * 9 8 7 39 39 H 1.09001 * 109.47337 * 300.00226 * 10 9 8 40 40 H 1.09008 * 109.46936 * 59.99939 * 10 9 8 41 41 H 1.08001 * 126.57790 * 359.93388 * 12 11 10 42 42 H 0.97009 * 119.99837 * 0.02562 * 16 14 13 43 43 H 1.08996 * 109.47525 * 300.00272 * 17 16 14 44 44 H 1.08997 * 109.47313 * 60.00440 * 17 16 14 45 45 H 1.08996 * 109.46923 * 300.00572 * 18 17 16 46 46 H 1.08999 * 109.46548 * 60.00453 * 18 17 16 47 47 H 1.09005 * 113.60940 * 254.52351 * 21 19 18 48 48 H 1.09000 * 113.62055 * 25.42755 * 21 19 18 49 49 H 1.09001 * 113.61896 * 270.89240 * 25 22 21 50 50 H 1.09000 * 113.61406 * 139.98262 * 25 22 21 51 51 H 1.08005 * 119.97640 * 180.29444 * 30 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0337 -1.4482 6 6 2.0551 -2.6876 -2.5759 7 6 2.8524 -2.0156 -3.4899 8 8 3.3051 -2.6570 -4.5996 9 6 2.9202 -4.0236 -4.7614 10 6 3.5193 -4.5721 -6.0579 11 7 3.1252 -5.9733 -6.2235 12 6 2.5018 -6.5121 -7.2906 13 6 2.3301 -7.8399 -7.0198 14 6 1.6894 -8.8259 -7.9108 15 8 1.2587 -8.4776 -8.9932 16 7 1.5816 -10.1127 -7.5249 17 6 0.9449 -11.0917 -8.4094 18 6 0.9513 -12.4663 -7.7374 19 6 0.2858 -13.4886 -8.6609 20 1 -0.6293 -13.1128 -9.1185 21 6 1.2560 -14.1376 -9.6620 22 6 0.5180 -15.4609 -9.3989 23 1 1.1797 -16.3249 -9.3367 24 9 -0.5745 -15.6716 -10.2469 25 6 0.1311 -14.8816 -8.0280 26 7 2.8435 -8.0962 -5.8044 27 7 3.3282 -7.0129 -5.3049 28 6 3.1885 -0.6866 -3.2690 29 17 4.1860 0.1589 -4.4110 30 6 2.7225 -0.0357 -2.1423 31 1 -0.3934 0.4418 -0.7650 32 1 1.7923 -0.5138 0.8899 33 1 1.5616 2.4678 1.2086 34 1 3.5346 1.7703 -0.0322 35 1 0.9759 -2.5572 -0.7361 36 1 1.7927 -3.7216 -2.7453 37 1 3.2862 -4.6066 -3.9164 38 1 1.8332 -4.0921 -4.8065 39 1 3.1530 -3.9890 -6.9028 40 1 4.6063 -4.5037 -6.0133 41 1 2.1962 -5.9933 -8.1871 42 1 1.9249 -10.3905 -6.6612 43 1 -0.0834 -10.7888 -8.6063 44 1 1.4946 -11.1438 -9.3492 45 1 1.9795 -12.7694 -7.5401 46 1 0.4013 -12.4138 -6.7978 47 1 1.1421 -13.7695 -10.6817 48 1 2.2928 -14.1414 -9.3256 49 1 0.8603 -15.0886 -7.2448 50 1 -0.8908 -15.1140 -7.7284 51 1 2.9794 0.9994 -1.9720 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_7143556.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:40 Heat of formation + Delta-G solvation = -7.310162 kcal Electronic energy + Delta-G solvation = -35855.743439 eV Core-core repulsion = 30507.729045 eV Total energy + Delta-G solvation = -5348.014395 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.135 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.65516 -43.37254 -41.53212 -40.57328 -39.47761 -39.31610 -37.76751 -37.08622 -36.26607 -36.01198 -32.55925 -32.36808 -32.16100 -31.50873 -30.46172 -26.90111 -26.75417 -26.31112 -25.77229 -24.33859 -23.94256 -22.87952 -22.75243 -22.44241 -21.48764 -20.41106 -19.82122 -19.06881 -18.34951 -17.85554 -17.53306 -17.41502 -17.09986 -17.05943 -16.97124 -16.63809 -16.61434 -16.43401 -16.05704 -15.89931 -15.84281 -15.59598 -15.49392 -15.35286 -15.15925 -14.96413 -14.75843 -14.46618 -14.32176 -13.82779 -13.79136 -13.75528 -13.46088 -13.42346 -13.18042 -13.07606 -12.63857 -12.57285 -12.52326 -12.37743 -12.31083 -11.99284 -11.96897 -11.95166 -11.83599 -11.79251 -11.50395 -11.41542 -11.16451 -10.94866 -10.54309 -10.48761 -10.10896 -10.07320 -9.34367 -5.03628 -0.02774 0.00361 0.02630 0.51755 0.70730 1.07112 1.27554 1.59470 1.93436 1.94912 2.05978 2.15750 2.36956 3.08473 3.19827 3.30623 3.36933 3.46199 3.46776 3.53997 3.63055 3.65683 3.74336 3.75633 3.77636 3.86685 3.89004 3.96180 4.03622 4.06632 4.13196 4.27216 4.28419 4.41740 4.43324 4.44328 4.46740 4.59226 4.61325 4.65788 4.75599 4.76156 4.78100 4.84935 4.94804 4.99657 5.04871 5.14205 5.20324 5.23211 5.27268 5.35240 5.41509 5.52039 5.98783 6.33701 6.75206 6.78360 7.06286 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.061 4.061 3 Si 0.757 3.243 4 C -0.142 4.142 5 C -0.049 4.049 6 C -0.194 4.194 7 C 0.138 3.862 8 O -0.304 6.304 9 C 0.047 3.953 10 C 0.123 3.877 11 N -0.350 5.350 12 C 0.119 3.881 13 C -0.123 4.123 14 C 0.603 3.397 15 O -0.569 6.569 16 N -0.708 5.708 17 C 0.120 3.880 18 C -0.110 4.110 19 C -0.107 4.107 20 H 0.085 0.915 21 C -0.156 4.156 22 C 0.044 3.956 23 H 0.112 0.888 24 F -0.221 7.221 25 C -0.150 4.150 26 N -0.215 5.215 27 N -0.083 5.083 28 C -0.076 4.076 29 Cl -0.056 7.056 30 C -0.073 4.073 31 H 0.396 0.604 32 H 0.114 0.886 33 H -0.295 1.295 34 H -0.285 1.285 35 H 0.145 0.855 36 H 0.153 0.847 37 H 0.079 0.921 38 H 0.083 0.917 39 H 0.151 0.849 40 H 0.123 0.877 41 H 0.238 0.762 42 H 0.416 0.584 43 H 0.061 0.939 44 H 0.065 0.935 45 H 0.088 0.912 46 H 0.083 0.917 47 H 0.070 0.930 48 H 0.118 0.882 49 H 0.120 0.880 50 H 0.074 0.926 51 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.567 1.348 0.741 1.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.172 4.172 3 Si 0.664 3.336 4 C -0.143 4.143 5 C -0.067 4.067 6 C -0.213 4.213 7 C 0.091 3.909 8 O -0.217 6.217 9 C -0.029 4.029 10 C 0.003 3.997 11 N -0.136 5.136 12 C -0.038 4.038 13 C -0.263 4.263 14 C 0.388 3.612 15 O -0.448 6.448 16 N -0.358 5.358 17 C -0.003 4.003 18 C -0.147 4.147 19 C -0.126 4.126 20 H 0.104 0.896 21 C -0.194 4.194 22 C 0.008 3.992 23 H 0.130 0.870 24 F -0.202 7.202 25 C -0.187 4.187 26 N -0.089 5.089 27 N -0.063 5.063 28 C -0.104 4.104 29 Cl -0.028 7.028 30 C -0.091 4.091 31 H 0.246 0.754 32 H 0.132 0.868 33 H -0.223 1.223 34 H -0.211 1.211 35 H 0.163 0.837 36 H 0.170 0.830 37 H 0.098 0.902 38 H 0.101 0.899 39 H 0.169 0.831 40 H 0.141 0.859 41 H 0.254 0.746 42 H 0.253 0.747 43 H 0.079 0.921 44 H 0.083 0.917 45 H 0.107 0.893 46 H 0.101 0.899 47 H 0.089 0.911 48 H 0.136 0.864 49 H 0.139 0.861 50 H 0.093 0.907 51 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 1.585 1.668 2.027 3.067 hybrid contribution -0.200 -0.441 -0.457 0.666 sum 1.385 1.227 1.570 2.426 Atomic orbital electron populations 1.86483 1.16905 1.82046 1.50606 1.24963 0.85413 1.09988 0.96787 0.93912 0.78266 0.76091 0.85342 1.20247 1.00857 0.95490 0.97730 1.21098 0.96138 0.93421 0.96043 1.21459 1.01953 1.01892 0.95958 1.18675 0.94460 0.90485 0.87246 1.85995 1.70584 1.25554 1.39518 1.22959 1.00979 0.80267 0.98694 1.21925 1.03756 0.73767 1.00236 1.50341 1.39697 1.10507 1.13030 1.23919 0.92321 0.93568 0.94014 1.21471 1.13939 0.95076 0.95799 1.16894 0.77888 0.82077 0.84321 1.90823 1.50751 1.80113 1.23112 1.45777 1.60020 1.07537 1.22506 1.21451 0.97660 0.87805 0.93391 1.21699 1.02643 0.91538 0.98846 1.22467 0.99055 0.94426 0.96680 0.89617 1.23719 1.00503 0.94424 1.00745 1.22716 0.85899 1.00153 0.90399 0.87050 1.92774 1.57792 1.96338 1.73277 1.23620 1.03924 0.94956 0.96247 1.74612 1.07218 1.19689 1.07379 1.81990 1.21863 0.89155 1.13342 1.20206 1.03293 0.91214 0.95644 1.98391 1.67887 1.76859 1.59623 1.20914 0.96421 1.00296 0.91511 0.75366 0.86830 1.22279 1.21143 0.83682 0.82964 0.90246 0.89931 0.83113 0.85917 0.74582 0.74692 0.92082 0.91710 0.89298 0.89882 0.91096 0.86352 0.86130 0.90731 0.82963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.44 12.77 -148.98 -1.90 -0.46 16 2 C -0.06 0.19 2.82 71.24 0.20 0.39 16 3 Si 0.76 -2.45 29.78 68.60 2.04 -0.41 16 4 C -0.14 0.37 5.39 -19.85 -0.11 0.26 16 5 C -0.05 0.13 9.60 22.26 0.21 0.35 16 6 C -0.19 0.57 9.04 22.36 0.20 0.77 16 7 C 0.14 -0.11 6.68 22.52 0.15 0.04 16 8 O -0.30 0.81 9.60 -92.72 -0.89 -0.08 16 9 C 0.05 -0.33 4.95 71.98 0.36 0.02 16 10 C 0.12 -1.20 6.91 86.38 0.60 -0.60 16 11 N -0.35 1.40 3.69 -347.09 -1.28 0.12 16 12 C 0.12 -0.41 11.27 83.85 0.95 0.53 16 13 C -0.12 -0.27 6.99 40.82 0.29 0.01 16 14 C 0.60 2.87 7.82 86.69 0.68 3.55 16 15 O -0.57 -6.02 16.86 -4.00 -0.07 -6.09 16 16 N -0.71 -0.17 5.55 -466.30 -2.59 -2.76 16 17 C 0.12 -0.15 5.66 86.38 0.49 0.34 16 18 C -0.11 0.67 5.16 30.60 0.16 0.83 16 19 C -0.11 0.42 3.63 -10.27 -0.04 0.39 16 20 H 0.09 -0.10 8.13 -2.39 -0.02 -0.12 16 21 C -0.16 0.60 7.53 31.12 0.23 0.83 16 22 C 0.04 -0.07 5.69 31.12 0.18 0.10 16 23 H 0.11 -0.57 8.14 -2.38 -0.02 -0.59 16 24 F -0.22 -1.38 17.38 44.97 0.78 -0.59 16 25 C -0.15 0.70 7.54 31.12 0.23 0.93 16 26 N -0.22 -0.85 12.04 -49.99 -0.60 -1.46 16 27 N -0.08 -0.22 13.65 37.02 0.51 0.29 16 28 C -0.08 -0.03 6.33 22.41 0.14 0.11 16 29 Cl -0.06 -0.08 28.51 -2.72 -0.08 -0.16 16 30 C -0.07 0.14 8.45 22.28 0.19 0.32 16 31 H 0.40 -4.11 8.70 -74.05 -0.64 -4.75 16 32 H 0.11 -0.27 7.96 -2.39 -0.02 -0.29 16 33 H -0.30 -1.25 7.11 99.48 0.71 -0.55 16 34 H -0.28 -0.50 7.11 99.48 0.71 0.21 16 35 H 0.15 -0.65 8.06 -2.91 -0.02 -0.67 16 36 H 0.15 -0.94 6.30 -2.91 -0.02 -0.96 16 37 H 0.08 -0.45 7.66 -2.39 -0.02 -0.47 16 38 H 0.08 -0.69 7.66 -2.38 -0.02 -0.71 16 39 H 0.15 -2.29 8.08 -2.39 -0.02 -2.31 16 40 H 0.12 -1.29 8.14 -2.38 -0.02 -1.31 16 41 H 0.24 -2.39 8.06 -2.91 -0.02 -2.42 16 42 H 0.42 -1.15 8.16 -92.70 -0.76 -1.90 16 43 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 44 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 45 H 0.09 -0.75 7.84 -2.39 -0.02 -0.76 16 46 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 47 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 48 H 0.12 -0.89 7.90 -2.39 -0.02 -0.91 16 49 H 0.12 -1.04 8.10 -2.39 -0.02 -1.06 16 50 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 51 H 0.15 -0.70 4.88 -2.91 -0.01 -0.71 16 Total: 0.00 -24.26 449.98 0.68 -23.58 By element: Atomic # 1 Polarization: -20.81 SS G_CDS: -0.35 Total: -21.16 kcal Atomic # 6 Polarization: 4.07 SS G_CDS: 5.11 Total: 9.18 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: -3.97 Total: -3.81 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -2.86 Total: -6.63 kcal Atomic # 9 Polarization: -1.38 SS G_CDS: 0.78 Total: -0.59 kcal Atomic # 14 Polarization: -2.45 SS G_CDS: 2.04 Total: -0.41 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -0.08 Total: -0.16 kcal Total: -24.26 0.68 -23.58 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_7143556.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.273 kcal (2) G-P(sol) polarization free energy of solvation -24.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.676 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.584 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds