Wall clock time and date at job start Tue Mar 9 2021 12:58:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37927 * 120.07235 * 2 1 4 4 C 1.38386 * 120.14485 * 179.97438 * 3 2 1 5 5 C 1.50702 * 119.85423 * 180.02562 * 4 3 2 6 6 C 1.38337 * 120.29278 * 0.02562 * 4 3 2 7 7 C 1.50695 * 119.92979 * 180.02562 * 6 4 3 8 8 O 1.42902 * 109.46812 * 285.00077 * 7 6 4 9 9 Si 1.86295 * 109.47453 * 164.99809 * 7 6 4 10 10 C 1.37981 * 120.14271 * 359.73914 * 6 4 3 11 11 C 1.39558 * 119.85345 * 0.49070 * 10 6 4 12 12 C 1.47840 * 120.14398 * 179.78553 * 11 10 6 13 13 O 1.21559 * 119.99701 * 173.73867 * 12 11 10 14 14 N 1.34770 * 120.00378 * 353.74398 * 12 11 10 15 15 C 1.46499 * 120.00406 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.47151 * 180.02562 * 15 14 12 17 17 C 1.52998 * 109.47013 * 179.97438 * 16 15 14 18 18 H 1.08999 * 112.85162 * 314.66242 * 17 16 15 19 19 C 1.53785 * 113.69138 * 85.93314 * 17 16 15 20 20 C 1.53787 * 87.08135 * 139.99413 * 19 17 16 21 21 H 1.08996 * 113.61571 * 220.02140 * 20 19 17 22 22 F 1.39897 * 113.69149 * 89.12504 * 20 19 17 23 23 C 1.53780 * 113.61553 * 183.46770 * 17 16 15 24 24 H 1.09000 * 109.47662 * 263.43106 * 1 2 3 25 25 H 1.09002 * 109.47306 * 23.43291 * 1 2 3 26 26 H 1.09000 * 109.47487 * 143.43273 * 1 2 3 27 27 H 1.08001 * 119.93414 * 359.97438 * 3 2 1 28 28 H 1.09003 * 109.46813 * 90.00079 * 5 4 3 29 29 H 1.08999 * 109.47179 * 210.00033 * 5 4 3 30 30 H 1.08996 * 109.47266 * 330.00017 * 5 4 3 31 31 H 1.09000 * 109.47210 * 44.99528 * 7 6 4 32 32 H 0.96702 * 114.00084 * 299.99713 * 8 7 6 33 33 H 1.48502 * 110.00314 * 179.97438 * 9 7 6 34 34 H 1.48500 * 110.00028 * 301.32148 * 9 7 6 35 35 H 1.08001 * 120.07726 * 180.25312 * 10 6 4 36 36 H 0.96999 * 120.00251 * 359.97438 * 14 12 11 37 37 H 1.09000 * 109.47470 * 59.99715 * 15 14 12 38 38 H 1.09005 * 109.47001 * 299.99760 * 15 14 12 39 39 H 1.09003 * 109.47450 * 60.00216 * 16 15 14 40 40 H 1.08995 * 109.47383 * 299.99473 * 16 15 14 41 41 H 1.09002 * 113.61394 * 254.54108 * 19 17 16 42 42 H 1.08991 * 113.61332 * 25.44719 * 19 17 16 43 43 H 1.09001 * 113.61402 * 334.48667 * 23 17 16 44 44 H 1.09008 * 113.61367 * 105.30399 * 23 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1936 0.0000 4 6 3.5820 1.1954 0.0005 5 6 4.3305 2.5033 0.0011 6 6 4.2813 0.0018 0.0005 7 6 5.7882 0.0132 0.0017 8 8 6.2628 0.3661 -1.2992 9 14 6.4218 -1.6787 0.4561 10 6 3.6020 -1.1992 0.0054 11 6 2.2065 -1.2081 0.0000 12 6 1.4722 -2.4912 0.0005 13 8 0.2616 -2.4986 0.1106 14 7 2.1448 -3.6527 -0.1211 15 6 1.4171 -4.9242 -0.1213 16 6 2.4090 -6.0795 -0.2709 17 6 1.6491 -7.4074 -0.2704 18 1 0.8938 -7.4626 0.5136 19 6 1.1291 -7.8223 -1.6570 20 6 1.5358 -9.2599 -1.2924 21 1 1.9858 -9.8093 -2.1193 22 9 0.5278 -9.9822 -0.6449 23 6 2.5648 -8.6413 -0.3315 24 1 -0.3634 -0.1176 1.0209 25 1 -0.3634 0.9429 -0.4087 26 1 -0.3634 -0.8254 -0.6122 27 1 1.6582 2.1290 -0.0004 28 1 4.5106 2.8184 1.0290 29 1 5.2836 2.3768 -0.5124 30 1 3.7388 3.2608 -0.5127 31 1 6.1454 0.7424 0.7289 32 1 5.9826 -0.2406 -1.9981 33 1 7.9068 -1.6808 0.4602 34 1 5.9091 -2.0708 1.7935 35 1 4.1490 -2.1305 0.0096 36 1 3.1108 -3.6468 -0.2093 37 1 0.7127 -4.9396 -0.9529 38 1 0.8735 -5.0318 0.8174 39 1 3.1131 -6.0640 0.5610 40 1 2.9529 -5.9722 -1.2093 41 1 0.0539 -7.6900 -1.7776 42 1 1.7036 -7.4020 -2.4824 43 1 3.5318 -8.4448 -0.7946 44 1 2.6498 -9.1694 0.6183 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14412250_9599494.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:43 Heat of formation + Delta-G solvation = -74.667202 kcal Electronic energy + Delta-G solvation = -25202.248171 eV Core-core repulsion = 21421.826333 eV Total energy + Delta-G solvation = -3780.421838 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.64064 -41.66949 -40.11209 -39.29232 -37.63589 -36.25513 -34.38281 -33.61429 -31.66774 -29.28317 -28.55077 -26.79811 -26.01955 -25.37445 -23.66319 -22.97821 -22.18548 -21.01269 -20.37322 -19.04376 -17.56362 -17.52329 -17.13319 -16.79144 -16.70658 -16.32891 -16.21277 -16.10263 -15.89183 -15.64116 -15.42711 -14.91098 -14.76299 -14.53128 -14.39829 -14.11492 -13.88816 -13.77638 -13.46143 -13.34172 -13.07269 -13.04331 -12.84556 -12.60801 -12.55658 -12.41151 -12.14532 -11.91787 -11.86723 -11.76082 -11.15644 -11.02644 -10.67909 -10.41380 -10.19980 -9.90125 -9.60713 -5.07074 -0.25961 0.16580 1.28916 1.63150 1.75409 1.97880 2.09799 2.64604 3.33129 3.39587 3.46452 3.52350 3.61546 3.66767 3.72269 3.77258 3.81704 3.93048 4.12196 4.19024 4.23630 4.32467 4.46300 4.48980 4.51469 4.56725 4.64990 4.66492 4.74925 4.77419 4.78570 4.79744 4.87937 4.90111 4.98190 5.02722 5.07664 5.14238 5.17768 5.23936 5.25303 5.42296 5.48337 5.51971 5.54701 5.79547 6.48628 6.78935 7.17019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.026 4.026 3 C -0.138 4.138 4 C -0.033 4.033 5 C -0.127 4.127 6 C -0.140 4.140 7 C -0.070 4.070 8 O -0.549 6.549 9 Si 0.768 3.232 10 C -0.063 4.063 11 C -0.158 4.158 12 C 0.553 3.447 13 O -0.567 6.567 14 N -0.714 5.714 15 C 0.120 3.880 16 C -0.110 4.110 17 C -0.109 4.109 18 H 0.079 0.921 19 C -0.156 4.156 20 C 0.042 3.958 21 H 0.112 0.888 22 F -0.223 7.223 23 C -0.148 4.148 24 H 0.067 0.933 25 H 0.073 0.927 26 H 0.079 0.921 27 H 0.143 0.857 28 H 0.079 0.921 29 H 0.081 0.919 30 H 0.077 0.923 31 H 0.109 0.891 32 H 0.396 0.604 33 H -0.295 1.295 34 H -0.284 1.284 35 H 0.155 0.845 36 H 0.414 0.586 37 H 0.061 0.939 38 H 0.052 0.948 39 H 0.087 0.913 40 H 0.099 0.901 41 H 0.066 0.934 42 H 0.123 0.877 43 H 0.126 0.874 44 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.408 -0.831 -3.270 6.374 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.028 4.028 3 C -0.156 4.156 4 C -0.033 4.033 5 C -0.183 4.183 6 C -0.140 4.140 7 C -0.180 4.180 8 O -0.358 6.358 9 Si 0.673 3.327 10 C -0.081 4.081 11 C -0.161 4.161 12 C 0.342 3.658 13 O -0.448 6.448 14 N -0.367 5.367 15 C -0.004 4.004 16 C -0.148 4.148 17 C -0.128 4.128 18 H 0.097 0.903 19 C -0.194 4.194 20 C 0.006 3.994 21 H 0.130 0.870 22 F -0.204 7.204 23 C -0.185 4.185 24 H 0.086 0.914 25 H 0.091 0.909 26 H 0.097 0.903 27 H 0.161 0.839 28 H 0.098 0.902 29 H 0.100 0.900 30 H 0.096 0.904 31 H 0.126 0.874 32 H 0.246 0.754 33 H -0.223 1.223 34 H -0.211 1.211 35 H 0.172 0.828 36 H 0.253 0.747 37 H 0.079 0.921 38 H 0.070 0.930 39 H 0.105 0.895 40 H 0.117 0.883 41 H 0.084 0.916 42 H 0.141 0.859 43 H 0.144 0.856 44 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 5.258 -0.880 -2.292 5.803 hybrid contribution -0.289 0.552 0.525 0.815 sum 4.969 -0.328 -1.767 5.284 Atomic orbital electron populations 1.21021 0.90261 1.03249 1.02956 1.20212 0.96911 0.92062 0.93568 1.21186 0.93740 0.97996 1.02676 1.20234 0.93438 0.95997 0.93625 1.21008 1.01019 0.93147 1.03171 1.20208 0.96650 0.92774 1.04397 1.25134 0.90921 1.12507 0.89426 1.86479 1.75922 1.56820 1.16537 0.94179 0.77542 0.78080 0.82877 1.21183 0.92253 0.97932 0.96700 1.19688 0.93871 0.92783 1.09788 1.18451 0.86771 0.84538 0.76024 1.90744 1.15307 1.87650 1.51059 1.45829 1.11680 1.05242 1.73922 1.21390 0.95451 0.82004 1.01508 1.21730 0.97318 0.90837 1.04892 1.22459 0.98348 0.94393 0.97596 0.90266 1.23723 1.02648 0.94199 0.98792 1.22761 0.87472 0.92613 0.96572 0.86998 1.92772 1.63698 1.80038 1.83918 1.23621 0.98866 0.95841 1.00214 0.91447 0.90851 0.90260 0.83904 0.90248 0.90023 0.90394 0.87381 0.75432 1.22255 1.21087 0.82804 0.74750 0.92106 0.92984 0.89458 0.88299 0.91556 0.85924 0.85599 0.90959 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.61 8.74 71.24 0.62 0.01 16 2 C -0.03 -0.11 5.91 -19.61 -0.12 -0.22 16 3 C -0.14 -0.20 9.31 22.23 0.21 0.01 16 4 C -0.03 -0.01 5.89 -19.80 -0.12 -0.12 16 5 C -0.13 0.26 9.31 71.24 0.66 0.92 16 6 C -0.14 0.25 5.26 -19.90 -0.10 0.14 16 7 C -0.07 0.25 1.88 71.23 0.13 0.38 16 8 O -0.55 1.93 11.91 -148.98 -1.78 0.15 16 9 Si 0.77 -4.40 29.91 68.60 2.05 -2.35 16 10 C -0.06 0.19 8.13 22.53 0.18 0.37 16 11 C -0.16 -0.39 5.87 -20.09 -0.12 -0.51 16 12 C 0.55 2.52 7.70 86.79 0.67 3.19 16 13 O -0.57 -6.90 13.34 -3.90 -0.05 -6.95 16 14 N -0.71 2.11 5.50 -465.98 -2.57 -0.45 16 15 C 0.12 -0.34 5.67 86.38 0.49 0.15 16 16 C -0.11 1.00 5.16 30.59 0.16 1.16 16 17 C -0.11 0.59 3.62 -10.27 -0.04 0.55 16 18 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 19 C -0.16 0.79 7.53 31.12 0.23 1.03 16 20 C 0.04 -0.11 5.69 31.12 0.18 0.06 16 21 H 0.11 -0.71 8.14 -2.39 -0.02 -0.73 16 22 F -0.22 -1.31 17.39 44.97 0.78 -0.53 16 23 C -0.15 0.95 7.54 31.12 0.23 1.18 16 24 H 0.07 0.44 8.14 -2.39 -0.02 0.42 16 25 H 0.07 0.11 8.04 -2.39 -0.02 0.09 16 26 H 0.08 0.71 5.85 -2.39 -0.01 0.70 16 27 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 28 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.08 -0.08 6.18 -2.39 -0.01 -0.09 16 30 H 0.08 -0.26 8.08 -2.39 -0.02 -0.28 16 31 H 0.11 -0.24 7.38 -2.39 -0.02 -0.26 16 32 H 0.40 -4.53 8.70 -74.06 -0.64 -5.18 16 33 H -0.29 -0.58 7.11 99.48 0.71 0.13 16 34 H -0.28 0.12 7.11 99.48 0.71 0.83 16 35 H 0.16 -1.54 3.51 -2.91 -0.01 -1.56 16 36 H 0.41 -4.17 6.55 -92.71 -0.61 -4.78 16 37 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 38 H 0.05 0.06 8.14 -2.38 -0.02 0.04 16 39 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 40 H 0.10 -1.29 7.88 -2.39 -0.02 -1.31 16 41 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 42 H 0.12 -1.18 7.92 -2.39 -0.02 -1.19 16 43 H 0.13 -1.43 8.10 -2.39 -0.02 -1.45 16 44 H 0.07 -0.30 8.14 -2.38 -0.02 -0.32 16 Total: 0.00 -20.07 354.98 1.53 -18.54 By element: Atomic # 1 Polarization: -16.53 SS G_CDS: -0.19 Total: -16.71 kcal Atomic # 6 Polarization: 5.02 SS G_CDS: 3.28 Total: 8.30 kcal Atomic # 7 Polarization: 2.11 SS G_CDS: -2.57 Total: -0.45 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -1.83 Total: -6.80 kcal Atomic # 9 Polarization: -1.31 SS G_CDS: 0.78 Total: -0.53 kcal Atomic # 14 Polarization: -4.40 SS G_CDS: 2.05 Total: -2.35 kcal Total: -20.07 1.53 -18.54 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_9599494.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.127 kcal (2) G-P(sol) polarization free energy of solvation -20.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.200 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.540 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.667 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds