Wall clock time and date at job start Tue Mar 9 2021 12:58:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86296 * 109.47072 * 2 1 4 4 C 1.50706 * 109.46885 * 120.00127 * 2 1 3 5 5 C 1.34232 * 126.49857 * 255.31421 * 4 2 1 6 6 N 1.36825 * 109.93934 * 180.13684 * 5 4 2 7 7 C 1.46497 * 125.06450 * 179.85181 * 6 5 4 8 8 C 1.50706 * 109.47170 * 264.69338 * 7 6 5 9 9 O 1.21278 * 120.00005 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99841 * 180.02562 * 8 7 6 11 11 C 1.46506 * 119.99638 * 179.97438 * 10 8 7 12 12 C 1.53001 * 109.47050 * 179.97438 * 11 10 8 13 13 C 1.53003 * 109.47101 * 180.02562 * 12 11 10 14 14 H 1.09004 * 112.84496 * 43.80358 * 13 12 11 15 15 C 1.53778 * 113.61196 * 174.99660 * 13 12 11 16 16 C 1.53787 * 87.08035 * 140.06532 * 15 13 12 17 17 H 1.08994 * 113.61447 * 220.02014 * 16 15 13 18 18 F 1.39898 * 113.61126 * 89.11415 * 16 15 13 19 19 C 1.53778 * 113.68969 * 272.53425 * 13 12 11 20 20 C 1.37693 * 109.87353 * 359.58182 * 6 5 4 21 21 C 1.39085 * 133.51639 * 180.26016 * 20 6 5 22 22 C 1.37788 * 119.77759 * 179.97438 * 21 20 6 23 23 C 1.38788 * 120.66906 * 0.02562 * 22 21 20 24 24 C 1.36656 * 120.52480 * 359.97438 * 23 22 21 25 25 C 1.39590 * 119.76811 * 0.02562 * 24 23 22 26 26 H 0.96696 * 113.99844 * 60.00372 * 1 2 3 27 27 H 1.08997 * 109.46834 * 239.99946 * 2 1 3 28 28 H 1.48499 * 110.00177 * 60.00116 * 3 2 1 29 29 H 1.48503 * 109.99639 * 181.31878 * 3 2 1 30 30 H 1.08007 * 125.02817 * 359.97438 * 5 4 2 31 31 H 1.09005 * 109.47300 * 144.69545 * 7 6 5 32 32 H 1.08999 * 109.47048 * 24.69221 * 7 6 5 33 33 H 0.96998 * 120.00562 * 0.02562 * 10 8 7 34 34 H 1.08995 * 109.46920 * 60.00052 * 11 10 8 35 35 H 1.08999 * 109.47157 * 299.99741 * 11 10 8 36 36 H 1.08994 * 109.47268 * 59.99701 * 12 11 10 37 37 H 1.08999 * 109.46948 * 299.99892 * 12 11 10 38 38 H 1.08998 * 113.61879 * 25.52015 * 15 13 12 39 39 H 1.08997 * 113.69304 * 254.62101 * 15 13 12 40 40 H 1.08993 * 113.61229 * 105.46192 * 19 13 12 41 41 H 1.09000 * 113.61263 * 334.55842 * 19 13 12 42 42 H 1.07996 * 120.10982 * 359.96591 * 21 20 6 43 43 H 1.07998 * 119.66231 * 179.97438 * 22 21 20 44 44 H 1.08002 * 119.73570 * 179.97438 * 23 22 21 45 45 H 1.08003 * 120.11549 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.4554 -0.1373 2.3254 6 7 2.8021 -1.0989 3.2349 7 6 3.4060 -0.8403 4.5443 8 6 4.9044 -0.9628 4.4396 9 8 5.4173 -1.2394 3.3760 10 7 5.6743 -0.7659 5.5281 11 6 7.1309 -0.8856 5.4264 12 6 7.7615 -0.6153 6.7939 13 6 9.2828 -0.7396 6.6875 14 1 9.6860 -0.2541 5.7987 15 6 10.0233 -0.3668 7.9827 16 6 10.9601 -1.5520 7.6952 17 1 11.2303 -2.1207 8.5849 18 9 12.0661 -1.2140 6.9081 19 6 9.8017 -2.1721 6.8961 20 6 2.4934 -2.3457 2.7386 21 6 2.6280 -3.6362 3.2396 22 6 2.2141 -4.7107 2.4829 23 6 1.6636 -4.5193 1.2233 24 6 1.5221 -3.2601 0.7116 25 6 1.9347 -2.1571 1.4611 26 1 -0.3933 0.4416 -0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 1.5616 2.4679 1.2085 29 1 3.5347 1.7702 -0.0321 30 1 2.5866 0.9254 2.4663 31 1 3.0317 -1.5657 5.2667 32 1 3.1457 0.1662 4.8720 33 1 5.2640 -0.5458 6.3790 34 1 7.5054 -0.1602 4.7042 35 1 7.3907 -1.8921 5.0986 36 1 7.3870 -1.3403 7.5164 37 1 7.5016 0.3914 7.1213 38 1 9.4212 -0.4944 8.8822 39 1 10.5199 0.6026 7.9397 40 1 10.1190 -2.6600 5.9745 41 1 9.1389 -2.7932 7.4985 42 1 3.0557 -3.7954 4.2184 43 1 2.3199 -5.7119 2.8735 44 1 1.3446 -5.3724 0.6429 45 1 1.0932 -3.1188 -0.2695 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14412250_9818708.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:47 Heat of formation + Delta-G solvation = -24.565622 kcal Electronic energy + Delta-G solvation = -27766.396804 eV Core-core repulsion = 23666.269342 eV Total energy + Delta-G solvation = -4100.127463 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.153 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -48.66720 -42.48695 -40.73156 -39.55327 -37.96504 -37.52832 -36.21507 -34.19491 -32.30060 -31.19242 -30.18071 -28.99375 -27.07874 -26.32644 -25.25359 -23.65527 -23.09294 -22.56689 -21.68510 -20.62621 -20.44445 -18.65726 -18.22240 -18.18251 -17.69649 -17.37349 -17.06753 -16.84518 -16.52791 -16.33454 -16.05356 -15.78810 -15.50049 -15.40914 -15.01985 -14.76342 -14.70591 -14.56253 -14.39132 -14.02021 -13.90588 -13.77062 -13.49656 -13.45962 -13.22916 -12.74309 -12.63482 -12.46213 -12.34167 -12.21353 -12.00612 -11.89367 -11.65121 -11.40115 -11.32652 -11.04681 -10.43346 -10.30447 -10.10627 -9.03355 -8.54355 -4.95507 0.26621 0.78929 1.36795 1.37559 1.42074 1.60160 1.76220 2.04849 2.10054 3.07981 3.09957 3.12416 3.37988 3.40429 3.44706 3.50958 3.64617 3.67330 3.75024 3.79517 3.83586 3.89424 4.03917 4.10036 4.20498 4.31546 4.35614 4.36207 4.43923 4.46648 4.55551 4.60056 4.70061 4.70842 4.77701 4.81949 4.87363 4.89761 4.92407 4.98423 5.17286 5.24757 5.27916 5.63702 5.79277 5.84824 5.88520 6.11310 6.28188 6.35756 6.80676 6.97050 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.032 4.032 3 Si 0.681 3.319 4 C -0.150 4.150 5 C 0.064 3.936 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.489 3.511 9 O -0.513 6.513 10 N -0.730 5.730 11 C 0.119 3.881 12 C -0.120 4.120 13 C -0.108 4.108 14 H 0.099 0.901 15 C -0.157 4.157 16 C 0.061 3.939 17 H 0.097 0.903 18 F -0.197 7.197 19 C -0.160 4.160 20 C 0.109 3.891 21 C -0.127 4.127 22 C -0.096 4.096 23 C -0.145 4.145 24 C -0.063 4.063 25 C -0.086 4.086 26 H 0.378 0.622 27 H 0.070 0.930 28 H -0.254 1.254 29 H -0.256 1.256 30 H 0.162 0.838 31 H 0.120 0.880 32 H 0.121 0.879 33 H 0.402 0.598 34 H 0.069 0.931 35 H 0.071 0.929 36 H 0.074 0.926 37 H 0.074 0.926 38 H 0.100 0.900 39 H 0.082 0.918 40 H 0.082 0.918 41 H 0.100 0.900 42 H 0.115 0.885 43 H 0.126 0.874 44 H 0.124 0.876 45 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.707 2.005 4.007 4.795 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.144 4.144 3 Si 0.583 3.417 4 C -0.157 4.157 5 C -0.061 4.061 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.273 3.727 9 O -0.387 6.387 10 N -0.383 5.383 11 C -0.004 4.004 12 C -0.158 4.158 13 C -0.126 4.126 14 H 0.117 0.883 15 C -0.195 4.195 16 C 0.025 3.975 17 H 0.115 0.885 18 F -0.177 7.177 19 C -0.198 4.198 20 C 0.005 3.995 21 C -0.148 4.148 22 C -0.115 4.115 23 C -0.164 4.164 24 C -0.082 4.082 25 C -0.090 4.090 26 H 0.225 0.775 27 H 0.088 0.912 28 H -0.179 1.179 29 H -0.180 1.180 30 H 0.179 0.821 31 H 0.138 0.862 32 H 0.139 0.861 33 H 0.236 0.764 34 H 0.087 0.913 35 H 0.089 0.911 36 H 0.093 0.907 37 H 0.093 0.907 38 H 0.118 0.882 39 H 0.101 0.899 40 H 0.100 0.900 41 H 0.118 0.882 42 H 0.133 0.867 43 H 0.144 0.856 44 H 0.142 0.858 45 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -0.571 2.181 4.472 5.008 hybrid contribution 0.132 -0.328 0.722 0.804 sum -0.439 1.853 5.195 5.533 Atomic orbital electron populations 1.86541 1.17682 1.81732 1.49304 1.23945 0.85113 1.09085 0.96232 0.95359 0.81004 0.77679 0.87700 1.19538 1.08762 0.91729 0.95694 1.21416 1.01724 0.93621 0.89310 1.43161 1.52607 1.04644 1.14485 1.21596 0.90790 1.05867 0.85209 1.21015 0.89518 0.77695 0.84487 1.90819 1.74595 1.45492 1.27811 1.45966 1.07641 1.72685 1.12036 1.21409 0.78527 1.02601 0.97865 1.21768 0.94736 1.02866 0.96382 1.22512 0.94154 0.96957 0.99023 0.88302 1.23612 0.97979 0.99178 0.98710 1.22373 0.83255 0.98119 0.93734 0.88496 1.92832 1.54925 1.93471 1.76500 1.23690 0.97303 0.97052 1.01732 1.18171 1.01232 0.85828 0.94279 1.19950 1.05032 0.89140 1.00666 1.20830 0.98277 0.97911 0.94480 1.20672 1.02443 0.96902 0.96418 1.20283 0.97867 0.90841 0.99168 1.18928 1.03437 0.92601 0.94003 0.77513 0.91155 1.17904 1.18026 0.82074 0.86233 0.86069 0.76360 0.91258 0.91110 0.90742 0.90692 0.88152 0.89945 0.89955 0.88166 0.86688 0.85616 0.85779 0.85855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.98 12.86 -35.23 -0.45 -1.43 16 2 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 3 Si 0.68 0.09 30.80 -169.99 -5.24 -5.15 16 4 C -0.15 -0.73 5.61 -102.71 -0.58 -1.31 16 5 C 0.06 0.26 9.89 -16.74 -0.17 0.09 16 6 N -0.47 -1.58 2.27 -115.71 -0.26 -1.84 16 7 C 0.09 -0.08 6.48 -5.19 -0.03 -0.12 16 8 C 0.49 0.63 7.90 -10.98 -0.09 0.54 16 9 O -0.51 -3.41 16.42 5.56 0.09 -3.32 16 10 N -0.73 1.47 5.56 -60.29 -0.33 1.14 16 11 C 0.12 -0.15 5.67 -4.04 -0.02 -0.17 16 12 C -0.12 0.43 5.17 -26.73 -0.14 0.30 16 13 C -0.11 0.24 3.62 -89.81 -0.33 -0.08 16 14 H 0.10 -0.11 8.13 -51.93 -0.42 -0.53 16 15 C -0.16 0.39 7.54 -25.92 -0.20 0.19 16 16 C 0.06 -0.07 5.69 -25.91 -0.15 -0.21 16 17 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 18 F -0.20 -0.49 17.38 2.25 0.04 -0.45 16 19 C -0.16 0.33 7.53 -25.92 -0.20 0.13 16 20 C 0.11 0.55 6.80 -83.99 -0.57 -0.02 16 21 C -0.13 -0.45 10.00 -39.43 -0.39 -0.84 16 22 C -0.10 -0.27 10.01 -39.54 -0.40 -0.67 16 23 C -0.15 -0.45 9.97 -39.95 -0.40 -0.85 16 24 C -0.06 -0.28 10.05 -39.65 -0.40 -0.68 16 25 C -0.09 -0.49 6.35 -105.14 -0.67 -1.16 16 26 H 0.38 -1.32 8.74 45.56 0.40 -0.93 16 27 H 0.07 0.06 7.96 -51.93 -0.41 -0.35 16 28 H -0.25 -0.58 7.04 56.52 0.40 -0.18 16 29 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 30 H 0.16 0.33 6.30 -52.48 -0.33 0.00 16 31 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 32 H 0.12 -0.48 8.12 -51.93 -0.42 -0.90 16 33 H 0.40 -2.16 8.47 -40.82 -0.35 -2.51 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.07 -0.34 7.85 -51.93 -0.41 -0.74 16 37 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.10 -0.40 8.10 -51.93 -0.42 -0.83 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.10 -0.35 7.90 -51.93 -0.41 -0.76 16 42 H 0.12 0.16 8.06 -52.49 -0.42 -0.26 16 43 H 0.13 0.05 8.06 -52.49 -0.42 -0.37 16 44 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 45 H 0.12 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 381.55 15.07 5.75 5.75 Total: 0.00 -11.82 381.55 -11.63 -23.45 By element: Atomic # 1 Polarization: -6.70 SS G_CDS: -6.63 Total: -13.33 kcal Atomic # 6 Polarization: -0.21 SS G_CDS: -4.60 Total: -4.82 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.60 Total: -0.71 kcal Atomic # 8 Polarization: -4.39 SS G_CDS: -0.36 Total: -4.75 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: 0.09 SS G_CDS: -5.24 Total: -5.15 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -11.82 -11.63 -23.45 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14412250_9818708.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.115 kcal (2) G-P(sol) polarization free energy of solvation -11.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.931 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.634 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.450 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds