Wall clock time and date at job start Tue Mar 9 2021 12:58:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.42899 * 109.47343 * 2 1 4 4 C 1.35899 * 117.00523 * 276.52774 * 3 2 1 5 5 C 1.38729 * 120.06036 * 178.36094 * 4 3 2 6 6 C 1.38135 * 119.94545 * 179.97438 * 5 4 3 7 7 C 1.38269 * 120.05743 * 0.02562 * 6 5 4 8 8 C 1.50698 * 119.94251 * 179.97438 * 7 6 5 9 9 O 1.42896 * 109.47494 * 65.00150 * 8 7 6 10 10 Si 1.86302 * 109.46974 * 184.99800 * 8 7 6 11 11 H 1.48505 * 109.46919 * 60.00087 * 10 8 7 12 12 H 1.48502 * 109.47476 * 180.02562 * 10 8 7 13 13 H 1.48507 * 109.47291 * 300.00354 * 10 8 7 14 14 C 1.38263 * 120.10893 * 359.95547 * 7 6 5 15 15 C 1.38147 * 120.05809 * 359.78811 * 14 7 6 16 16 C 1.50700 * 109.47235 * 120.00335 * 2 1 3 17 17 O 1.21281 * 120.00205 * 254.67538 * 16 2 1 18 18 N 1.34774 * 120.00350 * 74.66383 * 16 2 1 19 19 C 1.46502 * 119.99616 * 5.26152 * 18 16 2 20 20 C 1.46495 * 120.00409 * 185.26417 * 18 16 2 21 21 C 1.50701 * 109.47340 * 90.00341 * 20 18 16 22 22 C 1.38214 * 119.99463 * 270.27428 * 21 20 18 23 23 C 1.38260 * 119.99687 * 179.97438 * 22 21 20 24 24 C 1.38216 * 120.00167 * 359.97438 * 23 22 21 25 25 C 1.38258 * 119.99785 * 359.97438 * 24 23 22 26 Xx 1.80991 * 119.99912 * 179.97438 * 25 24 23 27 26 F 9.02421 * 61.68318 * 150.47629 * 2 1 3 28 27 F 1.61005 * 90.00176 * 314.99992 * 26 25 24 29 28 F 1.60996 * 90.00179 * 134.99854 * 26 25 24 30 29 F 1.60997 * 90.00293 * 44.99759 * 26 25 24 31 30 F 1.60998 * 90.00304 * 224.99905 * 26 25 24 32 31 C 1.38217 * 119.99892 * 359.81518 * 25 24 23 33 32 H 1.09008 * 109.46875 * 55.18465 * 1 2 3 34 33 H 1.08993 * 109.47430 * 175.18583 * 1 2 3 35 34 H 1.09000 * 109.47307 * 295.19498 * 1 2 3 36 35 H 1.09002 * 109.47137 * 240.00155 * 2 1 3 37 36 H 1.08003 * 120.02226 * 359.94968 * 5 4 3 38 37 H 1.08004 * 119.97574 * 179.97438 * 6 5 4 39 38 H 1.09000 * 109.47439 * 304.99877 * 8 7 6 40 39 H 0.96703 * 114.00432 * 59.99296 * 9 8 7 41 40 H 1.08004 * 119.97040 * 180.02562 * 14 7 6 42 41 H 1.07997 * 120.03023 * 179.97438 * 15 14 7 43 42 H 1.09000 * 109.47058 * 91.99442 * 19 18 16 44 43 H 1.09000 * 109.47444 * 211.99311 * 19 18 16 45 44 H 1.09000 * 109.47513 * 331.99960 * 19 18 16 46 45 H 1.09010 * 109.47171 * 210.00228 * 20 18 16 47 46 H 1.08995 * 109.47194 * 329.99967 * 20 18 16 48 47 H 1.08001 * 119.99938 * 359.97438 * 22 21 20 49 48 H 1.08003 * 119.99749 * 179.97438 * 23 22 21 50 49 H 1.07998 * 120.00178 * 179.97438 * 24 23 22 51 50 H 1.08003 * 119.99594 * 180.02562 * 32 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 2.0823 1.9749 -1.2030 5 6 2.5038 3.2948 -1.2727 6 6 2.5807 3.9303 -2.4968 7 6 2.2373 3.2523 -3.6519 8 6 2.3215 3.9483 -4.9859 9 8 3.6849 4.2665 -5.2720 10 14 1.6537 2.8264 -6.3149 11 1 0.2367 2.4958 -6.0176 12 1 1.7372 3.5120 -7.6295 13 1 2.4552 1.5770 -6.3569 14 6 1.8172 1.9367 -3.5851 15 6 1.7438 1.2950 -2.3639 16 6 2.0323 -0.7105 1.2304 17 8 2.4962 -0.0729 2.1519 18 7 1.9660 -2.0544 1.3069 19 6 1.5134 -2.8324 0.1510 20 6 2.3463 -2.7373 2.5459 21 6 1.1364 -2.8790 3.4332 22 6 0.8259 -1.8852 4.3422 23 6 -0.2844 -2.0150 5.1558 24 6 -1.0841 -3.1382 5.0598 25 6 -0.7740 -4.1318 4.1498 26 9 -2.7506 -6.9128 3.9148 27 9 -1.8578 -5.7134 5.6304 28 9 -1.7839 -5.4926 2.4188 29 9 -3.1337 -4.6718 4.0584 30 9 -0.5080 -6.5343 3.9907 31 6 0.3334 -4.0000 3.3334 32 1 -0.3633 0.5868 -0.8438 33 1 -0.3634 -1.0240 -0.0862 34 1 -0.3634 0.4375 0.9299 35 1 1.8933 -0.5138 -0.8900 36 1 2.7714 3.8250 -0.3707 37 1 2.9084 4.9579 -2.5517 38 1 1.7332 4.8654 -4.9550 39 1 4.2680 3.4962 -5.3147 40 1 1.5500 1.4091 -4.4888 41 1 1.4152 0.2675 -2.3122 42 1 2.3743 -3.1224 -0.4513 43 1 0.9934 -3.7262 0.4956 44 1 0.8358 -2.2274 -0.4515 45 1 2.7413 -3.7254 2.3097 46 1 3.1093 -2.1549 3.0623 47 1 1.4506 -1.0074 4.4169 48 1 -0.5268 -1.2386 5.8664 49 1 -1.9511 -3.2398 5.6957 50 1 0.5754 -4.7760 2.6222 RHF calculation, no. of doubly occupied orbitals= 78 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14414422_10157680.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:52 Heat of formation + Delta-G solvation = 337.249891 kcal Electronic energy + Delta-G solvation = -41436.246254 eV Core-core repulsion = 35179.768889 eV Total energy + Delta-G solvation = -6256.477366 eV No. of doubly occupied orbitals = 78 Molecular weight (most abundant/longest-lived isotopes) = 423.143 amu Computer time = 46.51 seconds Orbital eigenvalues (eV) -44.37715 -44.23182 -44.18558 -44.09039 -43.53106 -42.03929 -41.33965 -40.49141 -39.07263 -37.17853 -36.93154 -34.20196 -32.88063 -32.48385 -31.86910 -31.50454 -28.63643 -27.55724 -26.55913 -25.13675 -24.14543 -23.99623 -22.90203 -22.15167 -20.47780 -19.65069 -18.39405 -18.37186 -18.10716 -17.43556 -17.16554 -17.00596 -16.86988 -16.48903 -16.31863 -15.99548 -15.70542 -15.61082 -15.27351 -15.24738 -15.17935 -14.99932 -14.93358 -14.75070 -14.62646 -14.59299 -14.30751 -14.18887 -14.16019 -14.14656 -14.03609 -13.95786 -13.89771 -13.65788 -13.62476 -13.61149 -13.57197 -13.46983 -13.43382 -13.16518 -13.10865 -12.86713 -12.60778 -12.28715 -12.25828 -12.16900 -12.04426 -11.96234 -11.92812 -11.51753 -11.40090 -11.08321 -10.83130 -10.62405 -10.35444 -10.03750 -9.97665 -9.21519 -5.25324 -4.79596 -3.14429 -0.76126 -0.57863 0.27750 0.30308 1.21795 1.27944 1.35740 1.47351 1.54287 1.90200 1.95051 2.40328 2.65597 2.65755 2.89024 3.21100 3.34828 3.41209 3.54686 3.59661 3.60085 3.70187 3.76534 3.81596 3.88611 3.94999 4.10176 4.14498 4.27238 4.30106 4.37355 4.44761 4.51004 4.54575 4.58473 4.62147 4.68974 4.70484 4.73953 4.85714 4.87781 4.96965 5.01869 5.11233 5.17330 5.23446 5.24838 5.51175 5.70143 6.01665 6.31855 6.74625 6.88469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.059 3.941 3 O -0.307 6.307 4 C 0.123 3.877 5 C -0.162 4.162 6 C -0.055 4.055 7 C -0.161 4.161 8 C -0.076 4.076 9 O -0.555 6.555 10 Si 0.980 3.020 11 H -0.255 1.255 12 H -0.281 1.281 13 H -0.247 1.247 14 C -0.089 4.089 15 C -0.205 4.205 16 C 0.524 3.476 17 O -0.545 6.545 18 N -0.604 5.604 19 C 0.048 3.952 20 C 0.151 3.849 21 C -0.044 4.044 22 C -0.074 4.074 23 C -0.036 4.036 24 C -0.109 4.109 25 C 0.324 3.676 26 F -0.218 7.218 27 F -0.164 7.164 28 F -0.156 7.156 29 F -0.161 7.161 30 F -0.161 7.161 31 C -0.098 4.098 32 H 0.081 0.919 33 H 0.105 0.895 34 H 0.064 0.936 35 H 0.122 0.878 36 H 0.132 0.868 37 H 0.140 0.860 38 H 0.121 0.879 39 H 0.388 0.612 40 H 0.138 0.862 41 H 0.156 0.844 42 H 0.084 0.916 43 H 0.090 0.910 44 H 0.091 0.909 45 H 0.133 0.867 46 H 0.118 0.882 47 H 0.181 0.819 48 H 0.215 0.785 49 H 0.182 0.818 50 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.823 5.841 -2.729 8.687 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.000 4.000 3 O -0.221 6.221 4 C 0.078 3.922 5 C -0.181 4.181 6 C -0.073 4.073 7 C -0.161 4.161 8 C -0.187 4.187 9 O -0.362 6.362 10 Si 0.805 3.195 11 H -0.179 1.179 12 H -0.207 1.207 13 H -0.171 1.171 14 C -0.107 4.107 15 C -0.223 4.223 16 C 0.311 3.689 17 O -0.421 6.421 18 N -0.337 5.337 19 C -0.093 4.093 20 C 0.029 3.971 21 C -0.046 4.046 22 C -0.092 4.092 23 C -0.053 4.053 24 C -0.127 4.127 25 C 0.320 3.680 26 F -0.218 7.218 27 F -0.163 7.163 28 F -0.155 7.155 29 F -0.160 7.160 30 F -0.160 7.160 31 C -0.116 4.116 32 H 0.100 0.900 33 H 0.123 0.877 34 H 0.083 0.917 35 H 0.139 0.861 36 H 0.150 0.850 37 H 0.158 0.842 38 H 0.139 0.861 39 H 0.237 0.763 40 H 0.155 0.845 41 H 0.174 0.826 42 H 0.103 0.897 43 H 0.109 0.891 44 H 0.109 0.891 45 H 0.151 0.849 46 H 0.136 0.864 47 H 0.198 0.802 48 H 0.232 0.768 49 H 0.199 0.801 50 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 5.600 6.326 -2.720 8.876 hybrid contribution -0.825 -1.717 0.284 1.927 sum 4.775 4.609 -2.436 7.069 Atomic orbital electron populations 1.22391 0.90995 1.05408 1.04513 1.22444 0.96839 0.82274 0.98433 1.86185 1.81006 1.26856 1.28013 1.19178 0.96149 0.92575 0.84270 1.20654 1.05199 0.92856 0.99347 1.20964 0.95641 1.00300 0.90378 1.20347 1.04309 0.95037 0.96427 1.24968 0.88004 1.07330 0.98367 1.86492 1.18304 1.37982 1.93439 0.85266 0.80056 0.77754 0.76472 1.17902 1.20682 1.17090 1.21061 0.97536 0.93995 0.98064 1.21394 1.07498 1.01923 0.91506 1.20336 0.77808 0.82527 0.88224 1.90732 1.44747 1.66200 1.40448 1.47801 1.66502 1.04802 1.14612 1.22458 1.01861 0.97434 0.87558 1.20723 0.91497 1.01505 0.83332 1.20609 0.96257 0.89283 0.98425 1.22203 0.96315 0.98998 0.91667 1.21965 0.90967 0.92779 0.99593 1.22210 1.04049 0.88599 0.97845 1.27742 0.79942 0.56085 1.04241 2.00000 1.74327 1.88210 1.59297 1.99920 1.93432 1.84385 1.38529 1.99917 1.74943 1.99025 1.41590 1.99920 1.72581 1.65649 1.77803 1.99918 1.44045 1.91618 1.80427 1.21821 0.89345 1.00294 1.00096 0.89963 0.87675 0.91651 0.86086 0.84978 0.84217 0.86126 0.76279 0.84456 0.82624 0.89748 0.89114 0.89064 0.84865 0.86370 0.80156 0.76802 0.80111 0.79670 Number of geometries 1 Number of calculations of the screened coulomb radii 15 The total number of SCF iterations 949. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 1.67 8.94 71.98 0.64 2.32 16 2 C 0.06 -0.39 1.80 29.85 0.05 -0.34 16 3 O -0.31 -0.31 9.38 -73.80 -0.69 -1.00 16 4 C 0.12 -0.01 6.52 22.51 0.15 0.14 16 5 C -0.16 -0.14 9.99 22.36 0.22 0.08 16 6 C -0.05 0.03 9.68 22.25 0.22 0.25 16 7 C -0.16 0.33 5.35 -19.85 -0.11 0.22 16 8 C -0.08 0.25 2.80 71.24 0.20 0.45 16 9 O -0.56 0.74 12.83 -148.98 -1.91 -1.17 16 10 Si 0.98 -3.76 25.13 68.60 1.72 -2.04 16 11 H -0.26 0.80 7.11 99.48 0.71 1.51 16 12 H -0.28 -0.21 7.11 99.48 0.71 0.50 16 13 H -0.25 1.19 7.04 99.48 0.70 1.89 16 14 C -0.09 0.33 8.66 22.25 0.19 0.52 16 15 C -0.20 0.86 8.32 22.37 0.19 1.05 16 16 C 0.52 -2.83 6.96 87.66 0.61 -2.22 16 17 O -0.54 -1.09 15.88 15.58 0.25 -0.85 16 18 N -0.60 7.33 2.86 -851.13 -2.43 4.90 16 19 C 0.05 -0.81 9.97 127.77 1.27 0.47 16 20 C 0.15 -2.17 5.58 85.63 0.48 -1.70 16 21 C -0.04 0.59 5.46 -19.87 -0.11 0.48 16 22 C -0.07 1.07 9.70 22.27 0.22 1.28 16 23 C -0.04 0.56 10.05 22.27 0.22 0.78 16 24 C -0.11 0.93 8.62 22.27 0.19 1.12 16 25 C 0.32 -0.78 4.82 22.27 0.11 -0.67 16 26 F -0.22 -5.42 16.66 44.97 0.75 -4.67 16 27 F -0.16 -2.40 15.31 44.97 0.69 -1.71 16 28 F -0.16 -1.90 15.31 44.97 0.69 -1.21 16 29 F -0.16 -2.26 15.31 44.97 0.69 -1.57 16 30 F -0.16 -2.16 15.31 44.97 0.69 -1.47 16 31 C -0.10 0.89 8.28 22.27 0.18 1.07 16 32 H 0.08 -0.74 7.29 -2.38 -0.02 -0.76 16 33 H 0.10 -1.50 6.17 -2.39 -0.01 -1.52 16 34 H 0.06 -0.42 8.14 -2.39 -0.02 -0.44 16 35 H 0.12 -1.42 5.16 -2.39 -0.01 -1.44 16 36 H 0.13 0.07 8.06 -2.91 -0.02 0.05 16 37 H 0.14 -0.31 8.06 -2.91 -0.02 -0.33 16 38 H 0.12 -0.53 7.96 -2.39 -0.02 -0.55 16 39 H 0.39 -3.01 8.70 -74.06 -0.64 -3.65 16 40 H 0.14 -0.96 4.86 -2.91 -0.01 -0.97 16 41 H 0.16 -1.61 5.69 -2.91 -0.02 -1.63 16 42 H 0.08 -1.56 8.14 -2.39 -0.02 -1.57 16 43 H 0.09 -1.64 8.09 -2.39 -0.02 -1.66 16 44 H 0.09 -1.68 4.49 -2.39 -0.01 -1.69 16 45 H 0.13 -2.54 8.02 -2.38 -0.02 -2.56 16 46 H 0.12 -1.54 7.30 -2.39 -0.02 -1.55 16 47 H 0.18 -2.71 7.82 -2.91 -0.02 -2.73 16 48 H 0.22 -4.74 8.06 -2.91 -0.02 -4.77 16 49 H 0.18 -1.50 7.40 -2.91 -0.02 -1.52 16 50 H 0.19 -1.98 7.40 -2.91 -0.02 -2.00 16 Total: 0.00 -39.40 433.56 6.51 -32.89 By element: Atomic # 1 Polarization: -28.53 SS G_CDS: 1.13 Total: -27.39 kcal Atomic # 6 Polarization: 0.36 SS G_CDS: 4.93 Total: 5.29 kcal Atomic # 7 Polarization: 7.33 SS G_CDS: -2.43 Total: 4.90 kcal Atomic # 8 Polarization: -0.66 SS G_CDS: -2.36 Total: -3.02 kcal Atomic # 9 Polarization: -14.14 SS G_CDS: 3.50 Total: -10.64 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 1.72 Total: -2.04 kcal Total: -39.40 6.51 -32.89 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14414422_10157680.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 370.139 kcal (2) G-P(sol) polarization free energy of solvation -39.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 330.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.889 kcal (6) G-S(sol) free energy of system = (1) + (5) 337.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 46.51 seconds