Wall clock time and date at job start Tue Mar 9 2021 13:05:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.35448 * 125.56296 * 2 1 4 4 C 1.50698 * 126.06804 * 359.97438 * 3 2 1 5 5 O 1.42897 * 109.47295 * 155.75304 * 4 3 2 6 6 Si 1.86305 * 109.47054 * 35.75822 * 4 3 2 7 7 C 1.39832 * 107.86353 * 179.97438 * 3 2 1 8 8 C 1.50701 * 126.45617 * 180.02562 * 7 3 2 9 9 C 1.37867 * 107.08638 * 359.97438 * 7 3 2 10 10 C 1.46684 * 126.23177 * 180.02562 * 9 7 3 11 11 O 1.21692 * 120.00214 * 359.97438 * 10 9 7 12 12 N 1.34776 * 119.99804 * 180.02562 * 10 9 7 13 13 C 1.46494 * 120.00021 * 179.97438 * 12 10 9 14 14 H 1.08995 * 112.91136 * 336.25386 * 13 12 10 15 15 C 1.53786 * 113.61123 * 107.50566 * 13 12 10 16 16 C 1.53787 * 87.08045 * 139.98235 * 15 13 12 17 17 H 1.09007 * 113.61373 * 89.11400 * 16 15 13 18 18 C 1.53002 * 113.61251 * 220.01692 * 16 15 13 19 19 N 1.46505 * 109.46749 * 272.49715 * 18 16 15 20 20 C 1.36878 * 126.39505 * 90.00740 * 19 18 16 21 21 C 1.34672 * 106.81604 * 179.97438 * 20 19 18 22 22 N 1.34129 * 108.02113 * 359.97438 * 21 20 19 23 23 C 1.30501 * 109.25364 * 359.72717 * 22 21 20 24 24 C 1.53780 * 87.08071 * 334.56592 * 16 15 13 25 25 N 1.35531 * 125.56113 * 180.27295 * 2 1 3 26 26 H 1.08992 * 109.47219 * 83.98661 * 1 2 3 27 27 H 1.08999 * 109.46916 * 203.98725 * 1 2 3 28 28 H 1.08996 * 109.46828 * 323.98087 * 1 2 3 29 29 H 1.09000 * 109.47541 * 275.75992 * 4 3 2 30 30 H 0.96704 * 114.00311 * 300.00435 * 5 4 3 31 31 H 1.48491 * 110.00033 * 58.67699 * 6 4 3 32 32 H 1.48495 * 110.00048 * 179.97438 * 6 4 3 33 33 H 1.09008 * 109.46918 * 269.97907 * 8 7 3 34 34 H 1.08995 * 109.47063 * 29.97720 * 8 7 3 35 35 H 1.09001 * 109.47462 * 149.98588 * 8 7 3 36 36 H 0.97001 * 119.99872 * 0.02562 * 12 10 9 37 37 H 1.08995 * 113.61544 * 25.43603 * 15 13 12 38 38 H 1.09008 * 113.60997 * 254.52837 * 15 13 12 39 39 H 1.08994 * 109.46900 * 32.49836 * 18 16 15 40 40 H 1.09001 * 109.46693 * 152.50087 * 18 16 15 41 41 H 1.08001 * 126.59368 * 359.95363 * 20 19 18 42 42 H 1.08004 * 125.98807 * 179.97438 * 21 20 19 43 43 H 1.07997 * 125.64835 * 180.29290 * 23 22 21 44 44 H 1.08998 * 113.61483 * 139.97934 * 24 16 15 45 45 H 1.08994 * 113.61443 * 270.88496 * 24 16 15 46 46 H 0.96995 * 125.68488 * 0.06274 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5320 -0.0005 5 8 2.8354 3.3714 0.5529 6 14 0.2711 2.6725 1.0253 7 6 3.6269 0.6767 0.0006 8 6 4.8485 1.5592 0.0014 9 6 3.6122 -0.7019 0.0015 10 6 4.7860 -1.5815 0.0029 11 8 5.9050 -1.1030 0.0029 12 7 4.6254 -2.9196 0.0032 13 6 5.7977 -3.7981 0.0041 14 1 6.6885 -3.3173 -0.3999 15 6 6.0357 -4.5063 1.3482 16 6 6.4066 -5.7571 0.5339 17 1 7.4640 -5.8117 0.2748 18 6 5.8723 -7.0594 1.1335 19 7 6.8355 -7.5801 2.1069 20 6 6.8714 -7.2966 3.4455 21 6 7.9093 -7.9824 3.9613 22 7 8.4910 -8.6664 2.9649 23 6 7.8494 -8.4350 1.8523 24 6 5.5252 -5.1897 -0.5912 25 7 2.2953 -1.1025 -0.0053 26 1 -0.3633 0.1077 -1.0219 27 1 -0.3633 -0.9389 0.4178 28 1 -0.3633 0.8312 0.6043 29 1 1.6079 2.8442 -1.0231 30 1 3.0752 3.1507 1.4633 31 1 0.5388 2.2197 2.4139 32 1 -0.2071 4.0783 1.0333 33 1 5.1438 1.7718 -1.0262 34 1 4.6215 2.4934 0.5148 35 1 5.6639 1.0506 0.5157 36 1 3.7335 -3.3010 0.0021 37 1 5.1315 -4.6261 1.9448 38 1 6.8684 -4.0933 1.9178 39 1 4.9214 -6.8673 1.6303 40 1 5.7261 -7.7917 0.3395 41 1 6.1971 -6.6475 3.9844 42 1 8.2190 -7.9817 4.9960 43 1 8.0911 -8.8553 0.8872 44 1 5.9455 -5.3284 -1.5872 45 1 4.4813 -5.4962 -0.5247 46 1 1.9834 -2.0210 -0.0105 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14468608_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:44 Heat of formation + Delta-G solvation = 68.120105 kcal Electronic energy + Delta-G solvation = -27877.849993 eV Core-core repulsion = 23964.806220 eV Total energy + Delta-G solvation = -3913.043773 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.168 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.95851 -42.69537 -40.97752 -39.36736 -37.97163 -35.53731 -34.19755 -33.66418 -32.88151 -30.43321 -29.36654 -29.00494 -27.38571 -26.77341 -26.36749 -24.13239 -22.42823 -22.27691 -21.70864 -21.12697 -20.72984 -20.26802 -19.23733 -18.47143 -17.69064 -17.26914 -16.80128 -16.61007 -16.35483 -16.08777 -15.96602 -15.63041 -15.27886 -15.05367 -14.88142 -14.76578 -14.37595 -14.30603 -14.16254 -14.10872 -13.95655 -13.72681 -13.57578 -13.47746 -13.29731 -13.09478 -12.90035 -12.56845 -12.38100 -12.30331 -12.00768 -11.86724 -11.49505 -11.19427 -10.92679 -10.55727 -10.49284 -10.21678 -9.54024 -9.45394 -8.99963 -4.74808 0.32935 1.14582 1.20177 1.63125 1.67925 1.88467 1.96451 2.06000 2.14743 2.22620 2.23197 3.33970 3.38118 3.43832 3.66107 3.70913 3.81773 3.82004 3.88929 3.95876 4.01652 4.13461 4.16596 4.21397 4.41147 4.44083 4.57939 4.61290 4.64341 4.65610 4.70570 4.75320 4.79092 4.79442 4.82198 4.87708 4.91272 4.99731 5.08302 5.13197 5.23474 5.30649 5.34931 5.47657 5.67652 5.80840 5.82041 6.31974 6.37661 6.49164 6.57983 7.08198 7.15901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.084 3.916 3 C -0.231 4.231 4 C -0.046 4.046 5 O -0.549 6.549 6 Si 0.742 3.258 7 C -0.075 4.075 8 C -0.094 4.094 9 C -0.079 4.079 10 C 0.587 3.413 11 O -0.571 6.571 12 N -0.704 5.704 13 C 0.115 3.885 14 H 0.088 0.912 15 C -0.144 4.144 16 C -0.117 4.117 17 H 0.087 0.913 18 C 0.115 3.885 19 N -0.453 5.453 20 C -0.045 4.045 21 C -0.069 4.069 22 N -0.547 5.547 23 C 0.173 3.827 24 C -0.114 4.114 25 N -0.514 5.514 26 H 0.122 0.878 27 H 0.112 0.888 28 H 0.090 0.910 29 H 0.117 0.883 30 H 0.381 0.619 31 H -0.297 1.297 32 H -0.303 1.303 33 H 0.052 0.948 34 H 0.085 0.915 35 H 0.054 0.946 36 H 0.412 0.588 37 H 0.103 0.897 38 H 0.048 0.952 39 H 0.114 0.886 40 H 0.120 0.880 41 H 0.196 0.804 42 H 0.169 0.831 43 H 0.228 0.772 44 H 0.086 0.914 45 H 0.121 0.879 46 H 0.435 0.565 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.573 -5.111 -3.575 14.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.036 4.036 3 C -0.237 4.237 4 C -0.155 4.155 5 O -0.357 6.357 6 Si 0.648 3.352 7 C -0.083 4.083 8 C -0.151 4.151 9 C -0.191 4.191 10 C 0.376 3.624 11 O -0.451 6.451 12 N -0.355 5.355 13 C 0.010 3.990 14 H 0.106 0.894 15 C -0.183 4.183 16 C -0.136 4.136 17 H 0.105 0.895 18 C -0.006 4.006 19 N -0.135 5.135 20 C -0.179 4.179 21 C -0.215 4.215 22 N -0.266 5.266 23 C -0.109 4.109 24 C -0.153 4.153 25 N -0.113 5.113 26 H 0.141 0.859 27 H 0.130 0.870 28 H 0.106 0.894 29 H 0.135 0.865 30 H 0.230 0.770 31 H -0.224 1.224 32 H -0.232 1.232 33 H 0.071 0.929 34 H 0.103 0.897 35 H 0.073 0.927 36 H 0.249 0.751 37 H 0.122 0.878 38 H 0.067 0.933 39 H 0.132 0.868 40 H 0.138 0.862 41 H 0.213 0.787 42 H 0.187 0.813 43 H 0.244 0.756 44 H 0.105 0.895 45 H 0.139 0.861 46 H 0.277 0.723 Dipole moment (debyes) X Y Z Total from point charges -11.598 -4.832 -3.512 13.046 hybrid contribution 0.841 0.553 0.845 1.314 sum -10.757 -4.280 -2.667 11.880 Atomic orbital electron populations 1.20792 0.84213 1.03318 1.05740 1.20674 0.95130 0.84850 1.02922 1.19660 0.92586 0.95803 1.15697 1.24554 0.99454 0.86297 1.05234 1.86525 1.57576 1.58208 1.33374 0.94346 0.81781 0.80521 0.78595 1.19930 0.95307 0.91653 1.01459 1.20454 0.94122 0.98895 1.01649 1.19910 0.83911 0.93614 1.21702 1.17268 0.87094 0.82478 0.75557 1.90827 1.26078 1.75960 1.52198 1.45658 1.10413 1.04461 1.74925 1.22493 0.89150 0.89510 0.97830 0.89355 1.23573 1.02184 0.95733 0.96783 1.22648 1.00627 0.93022 0.97340 0.89464 1.22191 0.91009 0.95793 0.91592 1.45751 1.24967 1.34533 1.08224 1.23060 1.03957 1.06415 0.84455 1.22617 0.97797 1.01451 0.99680 1.70239 1.30122 1.25989 1.00236 1.25524 0.88855 0.96313 1.00242 1.23304 1.02074 0.91460 0.98451 1.41641 1.03786 1.09266 1.56643 0.85937 0.86963 0.89353 0.86532 0.77036 1.22390 1.23207 0.92884 0.89667 0.92660 0.75061 0.87815 0.93293 0.86786 0.86164 0.78692 0.81321 0.75552 0.89523 0.86110 0.72332 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 1.29 9.40 71.24 0.67 1.96 16 2 C 0.08 -0.51 6.81 41.34 0.28 -0.23 16 3 C -0.23 -0.25 5.32 -20.12 -0.11 -0.36 16 4 C -0.05 -0.04 3.06 71.24 0.22 0.18 16 5 O -0.55 -2.90 10.24 -148.98 -1.53 -4.42 16 6 Si 0.74 -1.57 27.72 68.60 1.90 0.34 16 7 C -0.07 -0.47 6.15 -19.57 -0.12 -0.59 16 8 C -0.09 -0.89 9.43 71.24 0.67 -0.22 16 9 C -0.08 -0.19 7.06 40.35 0.28 0.10 16 10 C 0.59 2.74 7.79 86.45 0.67 3.41 16 11 O -0.57 -8.17 14.40 -4.32 -0.06 -8.23 16 12 N -0.70 3.43 5.35 -443.99 -2.38 1.06 16 13 C 0.12 -0.51 4.24 45.52 0.19 -0.31 16 14 H 0.09 0.22 7.46 -2.39 -0.02 0.21 16 15 C -0.14 0.84 7.43 31.12 0.23 1.07 16 16 C -0.12 1.07 3.96 -10.26 -0.04 1.03 16 17 H 0.09 -0.46 8.14 -2.38 -0.02 -0.47 16 18 C 0.12 -1.28 5.99 86.38 0.52 -0.77 16 19 N -0.45 1.18 2.75 -529.06 -1.46 -0.28 16 20 C -0.05 -0.01 11.58 83.09 0.96 0.95 16 21 C -0.07 -0.45 11.87 83.52 0.99 0.54 16 22 N -0.55 -5.50 11.25 -200.31 -2.25 -7.75 16 23 C 0.17 0.36 12.56 180.26 2.26 2.63 16 24 C -0.11 1.37 7.39 31.12 0.23 1.60 16 25 N -0.51 3.61 5.99 -171.93 -1.03 2.58 16 26 H 0.12 -2.30 8.14 -2.39 -0.02 -2.32 16 27 H 0.11 -2.23 8.14 -2.39 -0.02 -2.25 16 28 H 0.09 -1.26 2.71 -2.39 -0.01 -1.27 16 29 H 0.12 -0.06 7.96 -2.39 -0.02 -0.08 16 30 H 0.38 0.45 8.08 -74.05 -0.60 -0.14 16 31 H -0.30 -1.08 7.11 99.48 0.71 -0.37 16 32 H -0.30 -1.89 7.11 99.48 0.71 -1.18 16 33 H 0.05 0.58 8.14 -2.38 -0.02 0.56 16 34 H 0.08 0.64 5.12 -2.39 -0.01 0.63 16 35 H 0.05 0.72 6.48 -2.39 -0.02 0.70 16 36 H 0.41 -5.34 7.86 -92.71 -0.73 -6.07 16 37 H 0.10 -0.97 7.90 -2.39 -0.02 -0.98 16 38 H 0.05 0.02 8.14 -2.38 -0.02 0.00 16 39 H 0.11 -1.67 7.84 -2.39 -0.02 -1.69 16 40 H 0.12 -1.79 8.14 -2.39 -0.02 -1.81 16 41 H 0.20 -1.15 8.06 -2.91 -0.02 -1.17 16 42 H 0.17 0.68 8.06 -2.91 -0.02 0.66 16 43 H 0.23 -1.14 8.06 -2.91 -0.02 -1.16 16 44 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 45 H 0.12 -2.12 8.08 -2.39 -0.02 -2.14 16 46 H 0.44 -6.78 8.19 -92.71 -0.76 -7.54 16 Total: 0.00 -34.73 370.81 0.11 -34.61 By element: Atomic # 1 Polarization: -27.88 SS G_CDS: -1.01 Total: -28.89 kcal Atomic # 6 Polarization: 3.07 SS G_CDS: 7.92 Total: 10.99 kcal Atomic # 7 Polarization: 2.72 SS G_CDS: -7.12 Total: -4.40 kcal Atomic # 8 Polarization: -11.07 SS G_CDS: -1.59 Total: -12.66 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: 1.90 Total: 0.34 kcal Total: -34.73 0.11 -34.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.733 kcal (2) G-P(sol) polarization free energy of solvation -34.726 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.613 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds