Wall clock time and date at job start Tue Mar 9 2021 13:05:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35654 * 116.99686 * 2 1 4 4 C 1.38407 * 120.12379 * 0.02562 * 3 2 1 5 5 C 1.38719 * 120.03501 * 179.97438 * 4 3 2 6 6 O 1.35710 * 119.86525 * 179.97438 * 5 4 3 7 7 C 1.42899 * 116.99992 * 359.97438 * 6 5 4 8 8 C 1.39145 * 120.27452 * 0.02562 * 5 4 3 9 9 C 1.50695 * 119.88151 * 179.97438 * 8 5 4 10 10 O 1.42899 * 109.47558 * 74.99938 * 9 8 5 11 11 Si 1.86299 * 109.47178 * 195.00116 * 9 8 5 12 12 C 1.37587 * 120.23890 * 359.67166 * 8 5 4 13 13 C 1.39819 * 119.96250 * 0.62938 * 12 8 5 14 14 C 1.47301 * 120.13595 * 179.67354 * 13 12 8 15 15 O 1.21623 * 120.00000 * 179.72180 * 14 13 12 16 16 N 1.34773 * 120.00070 * 359.97438 * 14 13 12 17 17 C 1.46500 * 120.00431 * 179.72645 * 16 14 13 18 18 H 1.09006 * 112.84642 * 336.19847 * 17 16 14 19 19 C 1.53774 * 113.61696 * 107.50253 * 17 16 14 20 20 C 1.53780 * 87.08094 * 139.98559 * 19 17 16 21 21 H 1.09001 * 113.69257 * 89.13566 * 20 19 17 22 22 C 1.53003 * 113.61395 * 220.01964 * 20 19 17 23 23 N 1.46495 * 109.47305 * 272.49972 * 22 20 19 24 24 C 1.36882 * 126.39544 * 269.71163 * 23 22 20 25 25 C 1.34669 * 106.81731 * 179.84147 * 24 23 22 26 26 N 1.34127 * 108.02171 * 0.42282 * 25 24 23 27 27 C 1.30501 * 109.25444 * 359.73336 * 26 25 24 28 28 C 1.53780 * 113.61736 * 205.00698 * 17 16 14 29 29 H 1.09002 * 109.47419 * 299.99451 * 1 2 3 30 30 H 1.08995 * 109.47311 * 60.00505 * 1 2 3 31 31 H 1.09002 * 109.46559 * 180.02562 * 1 2 3 32 32 H 1.08001 * 119.98145 * 359.97438 * 4 3 2 33 33 H 1.09004 * 109.46641 * 60.00262 * 7 6 5 34 34 H 1.09000 * 109.47604 * 180.02562 * 7 6 5 35 35 H 1.09001 * 109.47442 * 300.00310 * 7 6 5 36 36 H 1.09002 * 109.47343 * 314.99913 * 9 8 5 37 37 H 0.96703 * 113.99579 * 59.99881 * 10 9 8 38 38 H 1.48500 * 110.00497 * 58.68005 * 11 9 8 39 39 H 1.48500 * 110.00406 * 179.97438 * 11 9 8 40 40 H 1.07996 * 120.02042 * 180.29474 * 12 8 5 41 41 H 0.97000 * 120.00112 * 359.73083 * 16 14 13 42 42 H 1.08994 * 113.61732 * 254.53524 * 19 17 16 43 43 H 1.09001 * 113.61275 * 25.43630 * 19 17 16 44 44 H 1.09004 * 109.47319 * 32.49804 * 22 20 19 45 45 H 1.08996 * 109.47328 * 152.49665 * 22 20 19 46 46 H 1.08002 * 126.59134 * 359.97438 * 24 23 22 47 47 H 1.08003 * 125.98922 * 180.18892 * 25 24 23 48 48 H 1.07993 * 125.64967 * 180.02562 * 27 26 25 49 49 H 1.09001 * 113.61340 * 334.56146 * 28 17 16 50 50 H 1.08992 * 113.62029 * 105.46665 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 1.2934 2.3711 0.0005 5 6 1.9250 3.6061 0.0011 6 8 1.1849 4.7437 0.0011 7 6 -0.2361 4.5931 -0.0001 8 6 3.3143 3.6835 0.0005 9 6 3.9913 5.0299 0.0005 10 8 3.8943 5.6119 1.3020 11 14 5.7858 4.8227 -0.4548 12 6 4.0723 2.5353 0.0063 13 6 3.4461 1.2852 -0.0006 14 6 4.2539 0.0534 -0.0018 15 8 3.7066 -1.0327 -0.0027 16 7 5.5994 0.1299 0.0033 17 6 6.4029 -1.0951 0.0083 18 1 5.8649 -1.9524 0.4128 19 6 7.1002 -1.3798 -1.3324 20 6 8.3219 -1.8266 -0.5121 21 1 8.3106 -2.8847 -0.2505 22 6 9.6576 -1.3761 -1.1071 23 7 10.1211 -2.3719 -2.0765 24 6 10.9191 -3.4522 -1.8126 25 6 11.0960 -4.1003 -2.9798 26 7 10.4320 -3.4287 -3.9321 27 6 9.8456 -2.3921 -3.3984 28 6 7.8062 -0.9091 0.6090 29 1 -0.3634 0.5137 0.8900 30 1 -0.3634 0.5137 -0.8900 31 1 -0.3632 -1.0277 0.0005 32 1 0.2148 2.3165 0.0005 33 1 -0.5439 4.0434 0.8895 34 1 -0.7058 5.5767 -0.0004 35 1 -0.5426 4.0442 -0.8905 36 1 3.5050 5.6811 -0.7258 37 1 4.3068 5.0851 2.0002 38 1 5.9005 4.1892 -1.7930 39 1 6.4646 6.1435 -0.4590 40 1 5.1503 2.5995 0.0107 41 1 6.0359 0.9962 0.0038 42 1 6.6384 -2.1860 -1.9022 43 1 7.2788 -0.4860 -1.9301 44 1 9.5276 -0.4160 -1.6065 45 1 10.3944 -1.2743 -0.3103 46 1 11.3266 -3.7324 -0.8525 47 1 11.6746 -5.0007 -3.1244 48 1 9.2400 -1.6704 -3.9263 49 1 8.1778 0.1135 0.5420 50 1 7.9142 -1.3352 1.6064 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:47 Heat of formation + Delta-G solvation = -8.532268 kcal Electronic energy + Delta-G solvation = -34174.743065 eV Core-core repulsion = 29558.210782 eV Total energy + Delta-G solvation = -4616.532283 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.90463 -42.11996 -41.01540 -40.13898 -39.25477 -38.45797 -36.98578 -35.37824 -33.98554 -32.26193 -31.72040 -30.31481 -29.13346 -28.92721 -28.19575 -26.91661 -26.17567 -25.16039 -23.82157 -22.65740 -22.18761 -21.78124 -21.48894 -20.85069 -20.03778 -18.81571 -18.56745 -18.10198 -17.93718 -17.31521 -17.24025 -16.68709 -16.58364 -16.47445 -16.28155 -15.98386 -15.81567 -15.72089 -15.66269 -15.41118 -15.30040 -14.79017 -14.66885 -14.35055 -14.25179 -14.08715 -14.03751 -13.72983 -13.63373 -13.53568 -13.35740 -13.04650 -12.80274 -12.66627 -12.59885 -12.37046 -12.28509 -12.08135 -12.02071 -11.69953 -11.60898 -10.78556 -10.75150 -10.45474 -10.44000 -10.05282 -9.95137 -9.36032 -9.18403 -5.21476 -0.25975 0.06655 1.18577 1.19638 1.51568 1.79348 1.84529 1.89309 2.00445 2.09277 2.13479 2.38298 2.63703 3.18560 3.28781 3.37055 3.42788 3.50622 3.55464 3.63316 3.67784 3.77408 3.87078 3.90121 3.93837 3.99675 4.01445 4.03346 4.04581 4.09671 4.09797 4.17185 4.20827 4.39180 4.44684 4.45662 4.49629 4.57376 4.62284 4.62949 4.71938 4.78106 4.87072 4.87969 4.89705 4.97586 5.11620 5.24505 5.38233 5.49774 5.90127 5.96051 6.24090 6.31120 6.50607 6.58117 7.25908 7.31825 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.314 4.314 5 C 0.223 3.777 6 O -0.296 6.296 7 C 0.021 3.979 8 C -0.199 4.199 9 C -0.050 4.050 10 O -0.535 6.535 11 Si 0.672 3.328 12 C -0.004 4.004 13 C -0.210 4.210 14 C 0.567 3.433 15 O -0.516 6.516 16 N -0.723 5.723 17 C 0.129 3.871 18 H 0.119 0.881 19 C -0.149 4.149 20 C -0.126 4.126 21 H 0.102 0.898 22 C 0.116 3.884 23 N -0.458 5.458 24 C -0.058 4.058 25 C -0.030 4.030 26 N -0.497 5.497 27 C 0.183 3.817 28 C -0.137 4.137 29 H 0.058 0.942 30 H 0.057 0.943 31 H 0.107 0.893 32 H 0.145 0.855 33 H 0.060 0.940 34 H 0.107 0.893 35 H 0.059 0.941 36 H 0.115 0.885 37 H 0.375 0.625 38 H -0.252 1.252 39 H -0.250 1.250 40 H 0.139 0.861 41 H 0.397 0.603 42 H 0.076 0.924 43 H 0.088 0.912 44 H 0.096 0.904 45 H 0.095 0.905 46 H 0.173 0.827 47 H 0.168 0.832 48 H 0.201 0.799 49 H 0.093 0.907 50 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.807 3.275 4.838 5.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.175 3.825 6 O -0.207 6.207 7 C -0.074 4.074 8 C -0.200 4.200 9 C -0.161 4.161 10 O -0.340 6.340 11 Si 0.573 3.427 12 C -0.022 4.022 13 C -0.214 4.214 14 C 0.356 3.644 15 O -0.392 6.392 16 N -0.376 5.376 17 C 0.024 3.976 18 H 0.137 0.863 19 C -0.188 4.188 20 C -0.146 4.146 21 H 0.120 0.880 22 C -0.007 4.007 23 N -0.140 5.140 24 C -0.190 4.190 25 C -0.178 4.178 26 N -0.214 5.214 27 C -0.099 4.099 28 C -0.176 4.176 29 H 0.077 0.923 30 H 0.076 0.924 31 H 0.126 0.874 32 H 0.162 0.838 33 H 0.079 0.921 34 H 0.125 0.875 35 H 0.077 0.923 36 H 0.132 0.868 37 H 0.222 0.778 38 H -0.176 1.176 39 H -0.174 1.174 40 H 0.156 0.844 41 H 0.232 0.768 42 H 0.095 0.905 43 H 0.107 0.893 44 H 0.114 0.886 45 H 0.113 0.887 46 H 0.190 0.810 47 H 0.186 0.814 48 H 0.218 0.782 49 H 0.111 0.889 50 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.858 3.033 3.200 4.492 hybrid contribution -1.001 0.779 0.644 1.423 sum -1.858 3.813 3.845 5.725 Atomic orbital electron populations 1.23250 0.78160 1.04905 1.01356 1.86400 1.21235 1.25010 1.85730 1.18726 0.90656 0.84417 0.87682 1.21315 1.01183 0.91512 1.19376 1.18718 0.90462 0.84707 0.88590 1.86161 1.19501 1.28503 1.86527 1.23222 0.77775 1.04696 1.01658 1.19451 0.90866 0.96403 1.13295 1.24834 1.09707 0.92251 0.89276 1.86560 1.82063 1.49288 1.16076 0.95525 0.77307 0.84697 0.85148 1.20661 0.98381 0.89994 0.93188 1.19042 0.90671 0.93562 1.18174 1.17830 0.81847 0.88557 0.76214 1.90857 1.71369 1.28702 1.48286 1.45843 1.05892 1.09185 1.76651 1.22410 0.89863 0.88811 0.96505 0.86349 1.23599 0.95645 1.02143 0.97395 1.22790 0.93200 1.01088 0.97502 0.87953 1.21928 0.96221 0.90704 0.91827 1.45573 1.37790 1.21541 1.09139 1.22753 1.02486 0.92137 1.01660 1.22352 1.04348 1.02165 0.88934 1.70318 1.12341 1.06177 1.32611 1.24983 1.03719 1.00141 0.81082 1.23379 0.94852 1.00513 0.98822 0.92342 0.92395 0.87422 0.83755 0.92128 0.87472 0.92284 0.86810 0.77782 1.17620 1.17442 0.84397 0.76773 0.90531 0.89348 0.88609 0.88656 0.80966 0.81429 0.78242 0.88898 0.89867 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.84 8.56 -40.59 -0.35 -1.18 16 3 C 0.23 0.48 6.70 -38.73 -0.26 0.23 16 4 C -0.31 -0.13 8.01 -39.34 -0.31 -0.44 16 5 C 0.22 0.20 6.67 -39.07 -0.26 -0.06 16 6 O -0.30 -0.30 9.80 -18.84 -0.18 -0.49 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.20 0.03 5.27 -104.53 -0.55 -0.52 16 9 C -0.05 0.02 2.37 36.00 0.09 0.11 16 10 O -0.54 -0.03 12.88 -35.23 -0.45 -0.48 16 11 Si 0.67 -1.62 29.91 -169.99 -5.08 -6.70 16 12 C 0.00 0.01 8.14 -39.23 -0.32 -0.31 16 13 C -0.21 -0.26 5.89 -104.83 -0.62 -0.88 16 14 C 0.57 1.26 7.76 -12.58 -0.10 1.17 16 15 O -0.52 -3.27 14.75 -16.67 -0.25 -3.52 16 16 N -0.72 1.19 5.30 -54.13 -0.29 0.90 16 17 C 0.13 -0.25 4.24 -67.12 -0.28 -0.54 16 18 H 0.12 0.04 7.46 -51.93 -0.39 -0.35 16 19 C -0.15 0.37 7.43 -25.92 -0.19 0.17 16 20 C -0.13 0.47 3.96 -89.81 -0.36 0.12 16 21 H 0.10 -0.24 8.14 -51.93 -0.42 -0.67 16 22 C 0.12 -0.46 5.99 -4.04 -0.02 -0.49 16 23 N -0.46 0.22 2.75 -118.58 -0.33 -0.10 16 24 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 25 C -0.03 -0.08 11.87 -17.81 -0.21 -0.30 16 26 N -0.50 -2.33 11.25 -14.67 -0.17 -2.50 16 27 C 0.18 0.27 12.56 -90.37 -1.14 -0.86 16 28 C -0.14 0.66 7.39 -25.92 -0.19 0.46 16 29 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 30 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 31 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.14 -0.24 4.50 -52.49 -0.24 -0.48 16 33 H 0.06 -0.20 7.65 -51.93 -0.40 -0.59 16 34 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 35 H 0.06 -0.20 7.65 -51.93 -0.40 -0.59 16 36 H 0.11 0.09 7.82 -51.93 -0.41 -0.32 16 37 H 0.38 -1.55 8.70 45.56 0.40 -1.16 16 38 H -0.25 0.09 7.11 56.52 0.40 0.49 16 39 H -0.25 -0.27 7.11 56.52 0.40 0.14 16 40 H 0.14 -0.66 3.44 -52.49 -0.18 -0.84 16 41 H 0.40 -1.89 6.75 -40.82 -0.28 -2.17 16 42 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.09 -0.31 7.90 -51.93 -0.41 -0.72 16 44 H 0.10 -0.51 7.84 -51.93 -0.41 -0.92 16 45 H 0.10 -0.48 8.14 -51.93 -0.42 -0.91 16 46 H 0.17 -0.41 8.06 -52.49 -0.42 -0.83 16 47 H 0.17 0.17 8.06 -52.48 -0.42 -0.25 16 48 H 0.20 -0.28 8.06 -52.49 -0.42 -0.70 16 49 H 0.09 -0.62 8.08 -51.93 -0.42 -1.04 16 50 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 LS Contribution 410.96 15.07 6.19 6.19 Total: 0.00 -13.29 410.96 -10.76 -24.05 By element: Atomic # 1 Polarization: -8.80 SS G_CDS: -6.92 Total: -15.72 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -2.94 Total: -0.45 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: -0.78 Total: -1.69 kcal Atomic # 8 Polarization: -4.44 SS G_CDS: -1.23 Total: -5.67 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.08 Total: -6.70 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -13.29 -10.76 -24.05 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.514 kcal (2) G-P(sol) polarization free energy of solvation -13.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.047 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds