Wall clock time and date at job start Tue Mar 9 2021 13:05:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.46872 * 2 1 4 4 C 1.50703 * 109.47106 * 119.99402 * 2 1 3 5 5 C 1.34458 * 126.48411 * 255.04477 * 4 2 1 6 6 N 1.36564 * 109.98179 * 179.97438 * 5 4 2 7 7 C 1.37826 * 109.86426 * 359.97438 * 6 5 4 8 8 C 1.38642 * 133.38249 * 180.28379 * 7 6 5 9 9 C 1.39316 * 119.66550 * 180.19377 * 8 7 6 10 10 C 1.47578 * 119.82928 * 179.76918 * 9 8 7 11 11 O 1.21591 * 120.00384 * 359.72687 * 10 9 8 12 12 N 1.34783 * 120.00079 * 179.72867 * 10 9 8 13 13 C 1.46497 * 120.00411 * 180.02562 * 12 10 9 14 14 H 1.08999 * 112.90332 * 23.74627 * 13 12 10 15 15 C 1.53779 * 113.61407 * 154.99736 * 13 12 10 16 16 C 1.53789 * 87.07725 * 139.98090 * 15 13 12 17 17 H 1.08997 * 113.61132 * 89.20370 * 16 15 13 18 18 C 1.52997 * 113.61182 * 220.01690 * 16 15 13 19 19 N 1.46504 * 109.47004 * 183.47119 * 18 16 15 20 20 C 1.36876 * 126.40093 * 270.32059 * 19 18 16 21 21 C 1.34665 * 106.82156 * 180.12098 * 20 19 18 22 22 N 1.34127 * 108.01668 * 359.58498 * 21 20 19 23 23 C 1.30500 * 109.25894 * 0.26753 * 22 21 20 24 24 C 1.53777 * 87.17423 * 334.60930 * 16 15 13 25 25 C 1.40198 * 120.33717 * 359.49790 * 9 8 7 26 26 C 1.36229 * 120.37931 * 0.24446 * 25 9 8 27 27 C 1.39876 * 119.95718 * 0.02562 * 26 25 9 28 28 H 0.96695 * 114.00095 * 60.00590 * 1 2 3 29 29 H 1.08997 * 109.47582 * 240.00047 * 2 1 3 30 30 H 1.48504 * 109.99718 * 298.67994 * 3 2 1 31 31 H 1.48500 * 110.00050 * 59.99688 * 3 2 1 32 32 H 1.07996 * 125.00519 * 359.94525 * 5 4 2 33 33 H 0.97003 * 125.06366 * 179.97438 * 6 5 4 34 34 H 1.08002 * 120.16903 * 359.94535 * 8 7 6 35 35 H 0.97004 * 119.99732 * 0.02562 * 12 10 9 36 36 H 1.08999 * 113.61812 * 25.43447 * 15 13 12 37 37 H 1.08997 * 113.61258 * 254.52468 * 15 13 12 38 38 H 1.08997 * 109.47636 * 63.47398 * 18 16 15 39 39 H 1.09003 * 109.47241 * 303.46748 * 18 16 15 40 40 H 1.08002 * 126.59064 * 0.02562 * 20 19 18 41 41 H 1.08002 * 125.99463 * 179.85418 * 21 20 19 42 42 H 1.07994 * 125.65001 * 179.97438 * 23 22 21 43 43 H 1.08995 * 113.61510 * 139.93947 * 24 16 15 44 44 H 1.09000 * 113.61476 * 270.84338 * 24 16 15 45 45 H 1.08003 * 119.80784 * 180.27369 * 25 9 8 46 46 H 1.07998 * 120.02342 * 180.02562 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4608 -0.1360 2.3250 6 7 2.8024 -1.0944 3.2359 7 6 2.4937 -2.3429 2.7403 8 6 2.6253 -3.6273 3.2455 9 6 2.2128 -4.7152 2.4792 10 6 2.3560 -6.0843 3.0113 11 8 2.8375 -6.2608 4.1138 12 7 1.9530 -7.1390 2.2752 13 6 2.0946 -8.4980 2.8036 14 1 2.1359 -8.5276 3.8924 15 6 1.0995 -9.5014 2.1972 16 6 2.2550 -10.5161 2.1789 17 1 2.3392 -11.0986 3.0963 18 6 2.2888 -11.3837 0.9191 19 7 3.3679 -12.3680 1.0329 20 6 4.6655 -12.2009 0.6308 21 6 5.3130 -13.3463 0.9174 22 7 4.4367 -14.1866 1.4875 23 6 3.2695 -13.6075 1.5599 24 6 3.2103 -9.3123 2.1236 25 6 1.6572 -4.5157 1.2076 26 6 1.5193 -3.2568 0.7058 27 6 1.9340 -2.1546 1.4607 28 1 -0.3933 0.4416 -0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 1.5877 2.4585 -1.2243 31 1 1.5613 2.4679 1.2084 32 1 2.5965 0.9264 2.4630 33 1 3.2026 -0.9221 4.1026 34 1 3.0492 -3.7839 4.2264 35 1 1.5692 -6.9981 1.3955 36 1 0.7480 -9.2219 1.2040 37 1 0.2890 -9.7749 2.8727 38 1 2.4632 -10.7525 0.0477 39 1 1.3356 -11.9007 0.8083 40 1 5.0885 -11.3201 0.1705 41 1 6.3560 -13.5509 0.7260 42 1 2.3734 -14.0467 1.9726 43 1 4.1013 -9.4333 2.7397 44 1 3.4370 -8.9809 1.1102 45 1 1.3362 -5.3650 0.6227 46 1 1.0901 -3.1097 -0.2743 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:56 Heat of formation + Delta-G solvation = 92.026143 kcal Electronic energy + Delta-G solvation = -29316.561943 eV Core-core repulsion = 25175.414011 eV Total energy + Delta-G solvation = -4141.147932 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.91525 -42.47975 -41.23118 -39.68000 -37.92025 -37.51453 -35.45206 -33.99402 -33.37360 -30.82231 -30.70514 -30.32031 -28.76746 -26.95744 -26.54090 -25.33388 -23.65523 -23.49576 -22.19744 -21.79331 -21.47924 -20.86807 -20.57104 -19.25170 -18.56213 -18.49314 -18.16788 -17.56881 -17.13022 -16.57586 -16.24595 -16.05708 -15.86203 -15.57407 -15.41879 -15.19254 -15.04607 -14.85903 -14.78909 -14.74081 -14.46712 -14.32838 -14.11915 -13.88154 -13.76492 -13.60270 -13.22677 -13.07741 -12.68701 -12.61160 -12.41744 -12.18899 -12.10571 -11.88187 -11.63133 -10.93537 -10.79451 -10.75115 -10.45875 -10.42664 -10.11247 -9.36763 -9.35806 -8.82102 -5.02367 -0.27176 0.37865 1.18920 1.23550 1.34343 1.51987 1.80846 1.86912 1.89966 1.97811 2.21098 2.37392 2.89709 3.16527 3.26247 3.43393 3.48551 3.54003 3.61381 3.69732 3.75715 3.84326 3.88941 3.94294 3.97463 4.04166 4.05775 4.18130 4.22273 4.35580 4.42390 4.45562 4.52991 4.55333 4.58654 4.63102 4.71438 4.76574 4.84912 4.86858 4.97253 5.06084 5.21885 5.37652 5.40442 5.41342 5.51420 5.59671 5.89485 5.97457 6.30163 6.36332 6.44465 6.47383 7.20058 7.24903 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.038 4.038 3 Si 0.680 3.320 4 C -0.164 4.164 5 C 0.080 3.920 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.054 4.054 9 C -0.124 4.124 10 C 0.565 3.435 11 O -0.537 6.537 12 N -0.717 5.717 13 C 0.126 3.874 14 H 0.118 0.882 15 C -0.136 4.136 16 C -0.126 4.126 17 H 0.103 0.897 18 C 0.116 3.884 19 N -0.457 5.457 20 C -0.054 4.054 21 C -0.031 4.031 22 N -0.496 5.496 23 C 0.179 3.821 24 C -0.146 4.146 25 C -0.114 4.114 26 C -0.072 4.072 27 C -0.062 4.062 28 H 0.377 0.623 29 H 0.073 0.927 30 H -0.260 1.260 31 H -0.255 1.255 32 H 0.177 0.823 33 H 0.423 0.577 34 H 0.136 0.864 35 H 0.401 0.599 36 H 0.091 0.909 37 H 0.083 0.917 38 H 0.093 0.907 39 H 0.097 0.903 40 H 0.172 0.828 41 H 0.168 0.832 42 H 0.203 0.797 43 H 0.076 0.924 44 H 0.087 0.913 45 H 0.125 0.875 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.227 5.080 -4.422 6.846 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.148 4.148 3 Si 0.581 3.419 4 C -0.172 4.172 5 C -0.048 4.048 6 N -0.185 5.185 7 C -0.024 4.024 8 C -0.076 4.076 9 C -0.128 4.128 10 C 0.353 3.647 11 O -0.415 6.415 12 N -0.368 5.368 13 C 0.021 3.979 14 H 0.136 0.864 15 C -0.175 4.175 16 C -0.146 4.146 17 H 0.121 0.879 18 C -0.006 4.006 19 N -0.140 5.140 20 C -0.186 4.186 21 C -0.179 4.179 22 N -0.213 5.213 23 C -0.103 4.103 24 C -0.185 4.185 25 C -0.133 4.133 26 C -0.091 4.091 27 C -0.067 4.067 28 H 0.224 0.776 29 H 0.091 0.909 30 H -0.184 1.184 31 H -0.179 1.179 32 H 0.194 0.806 33 H 0.261 0.739 34 H 0.154 0.846 35 H 0.238 0.762 36 H 0.110 0.890 37 H 0.102 0.898 38 H 0.112 0.888 39 H 0.115 0.885 40 H 0.189 0.811 41 H 0.186 0.814 42 H 0.220 0.780 43 H 0.095 0.905 44 H 0.106 0.894 45 H 0.143 0.857 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.874 4.824 -2.695 5.594 hybrid contribution -1.320 0.912 -0.858 1.819 sum -2.194 5.737 -3.552 7.095 Atomic orbital electron populations 1.86639 1.18254 1.79975 1.49524 1.24009 0.83898 1.09870 0.97017 0.95229 0.91509 0.74477 0.80676 1.19501 1.09442 0.91344 0.96888 1.21758 0.99749 0.94441 0.88886 1.41699 1.54751 1.03996 1.18080 1.18060 1.03321 0.86327 0.94728 1.20080 0.99341 0.88064 1.00082 1.19401 1.05297 0.92277 0.95849 1.18208 0.77259 0.84624 0.84561 1.90798 1.44230 1.86218 1.20217 1.45850 1.64397 1.05701 1.20873 1.22489 0.95908 0.79366 1.00166 0.86377 1.23365 0.96982 0.94839 1.02343 1.22795 0.97921 0.95114 0.98749 0.87886 1.21912 0.89652 0.90426 0.98647 1.45568 1.09305 1.13640 1.45523 1.22719 0.84474 1.02409 1.09042 1.22348 1.00074 0.91090 1.04357 1.70314 1.00116 1.31799 1.19119 1.25032 0.99228 0.83237 1.02790 1.23589 0.98192 0.94721 1.01968 1.20645 1.00702 0.97246 0.94742 1.20159 0.98790 0.90487 0.99627 1.19170 1.00872 0.93022 0.93633 0.77566 0.90919 1.18424 1.17918 0.80613 0.73909 0.84578 0.76241 0.89010 0.89835 0.88834 0.88450 0.81122 0.81434 0.78049 0.90531 0.89428 0.85745 0.85338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.42 12.86 -35.23 -0.45 -0.87 16 2 C -0.04 0.03 3.05 36.01 0.11 0.14 16 3 Si 0.68 -1.41 30.79 -169.99 -5.23 -6.64 16 4 C -0.16 -0.13 5.60 -102.74 -0.58 -0.70 16 5 C 0.08 -0.07 10.43 -16.78 -0.17 -0.24 16 6 N -0.58 0.49 6.07 -10.68 -0.06 0.43 16 7 C 0.08 0.12 7.26 -84.00 -0.61 -0.49 16 8 C -0.05 -0.11 9.61 -39.03 -0.37 -0.48 16 9 C -0.12 -0.19 5.87 -104.95 -0.62 -0.81 16 10 C 0.57 1.32 7.76 -12.45 -0.10 1.22 16 11 O -0.54 -3.26 15.91 5.29 0.08 -3.17 16 12 N -0.72 0.78 5.31 -53.95 -0.29 0.49 16 13 C 0.13 -0.19 4.24 -67.03 -0.28 -0.47 16 14 H 0.12 0.08 7.47 -51.93 -0.39 -0.31 16 15 C -0.14 0.56 7.40 -25.92 -0.19 0.37 16 16 C -0.13 0.43 3.96 -89.81 -0.36 0.08 16 17 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 18 C 0.12 -0.43 5.97 -4.04 -0.02 -0.45 16 19 N -0.46 0.18 2.75 -118.58 -0.33 -0.15 16 20 C -0.05 -0.03 11.58 -16.57 -0.19 -0.22 16 21 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 22 N -0.50 -2.31 11.25 -14.67 -0.17 -2.47 16 23 C 0.18 0.25 12.56 -90.37 -1.14 -0.88 16 24 C -0.15 0.32 7.45 -25.83 -0.19 0.12 16 25 C -0.11 0.03 9.46 -39.57 -0.37 -0.34 16 26 C -0.07 -0.04 10.03 -39.69 -0.40 -0.44 16 27 C -0.06 -0.12 6.35 -105.05 -0.67 -0.78 16 28 H 0.38 -1.22 8.74 45.56 0.40 -0.82 16 29 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 30 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 31 H -0.25 -0.13 7.04 56.52 0.40 0.27 16 32 H 0.18 -0.63 6.30 -52.49 -0.33 -0.96 16 33 H 0.42 -1.56 8.96 -40.82 -0.37 -1.93 16 34 H 0.14 0.24 7.62 -52.49 -0.40 -0.16 16 35 H 0.40 -1.50 6.72 -40.82 -0.27 -1.77 16 36 H 0.09 -0.51 8.08 -51.93 -0.42 -0.93 16 37 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 38 H 0.09 -0.44 7.87 -51.93 -0.41 -0.85 16 39 H 0.10 -0.49 8.14 -51.93 -0.42 -0.91 16 40 H 0.17 -0.33 8.06 -52.49 -0.42 -0.75 16 41 H 0.17 0.19 8.06 -52.49 -0.42 -0.23 16 42 H 0.20 -0.37 8.06 -52.49 -0.42 -0.79 16 43 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.09 -0.26 7.92 -51.93 -0.41 -0.67 16 45 H 0.12 -0.42 6.36 -52.48 -0.33 -0.76 16 46 H 0.13 -0.11 8.06 -52.49 -0.42 -0.54 16 LS Contribution 388.33 15.07 5.85 5.85 Total: 0.00 -12.51 388.33 -12.89 -25.40 By element: Atomic # 1 Polarization: -8.25 SS G_CDS: -5.93 Total: -14.18 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -6.36 Total: -4.69 kcal Atomic # 7 Polarization: -0.85 SS G_CDS: -0.84 Total: -1.70 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.37 Total: -4.04 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.23 Total: -6.64 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -12.51 -12.89 -25.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.425 kcal (2) G-P(sol) polarization free energy of solvation -12.511 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.888 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.399 kcal (6) G-S(sol) free energy of system = (1) + (5) 92.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds