Wall clock time and date at job start Tue Mar 9 2021 13:06:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50699 * 109.46972 * 239.99979 * 2 1 3 5 5 C 1.38403 * 119.82891 * 119.72612 * 4 2 1 6 6 C 1.37892 * 120.17235 * 179.72187 * 5 4 2 7 7 C 1.39840 * 119.82447 * 0.54973 * 6 5 4 8 8 C 1.47207 * 120.17014 * 179.74633 * 7 6 5 9 9 C 1.34808 * 119.99893 * 359.97438 * 8 7 6 10 10 C 1.46423 * 120.00279 * 179.97438 * 9 8 7 11 11 O 1.21700 * 119.99565 * 0.02562 * 10 9 8 12 12 N 1.34771 * 120.00404 * 180.02562 * 10 9 8 13 13 C 1.46505 * 120.00252 * 180.02562 * 12 10 9 14 14 H 1.08996 * 112.84702 * 336.19596 * 13 12 10 15 15 C 1.53782 * 113.61519 * 107.49991 * 13 12 10 16 16 C 1.53781 * 87.07903 * 139.98387 * 15 13 12 17 17 H 1.08995 * 113.61768 * 89.11497 * 16 15 13 18 18 C 1.53008 * 113.61390 * 220.02311 * 16 15 13 19 19 N 1.46500 * 109.46878 * 272.49659 * 18 16 15 20 20 C 1.36886 * 126.39539 * 269.71749 * 19 18 16 21 21 C 1.34675 * 106.81317 * 179.84077 * 20 19 18 22 22 N 1.34124 * 108.02209 * 0.42100 * 21 20 19 23 23 C 1.30497 * 109.25737 * 359.72900 * 22 21 20 24 24 C 1.53781 * 113.61553 * 205.00166 * 13 12 10 25 25 C 1.39830 * 119.66034 * 359.72840 * 7 6 5 26 26 C 1.37895 * 119.83096 * 359.97438 * 25 7 6 27 27 H 0.96696 * 114.00036 * 299.99991 * 1 2 3 28 28 H 1.09001 * 109.46558 * 120.00127 * 2 1 3 29 29 H 1.48502 * 109.99925 * 178.68072 * 3 2 1 30 30 H 1.48497 * 109.99842 * 299.99834 * 3 2 1 31 31 H 1.08001 * 119.90840 * 0.02562 * 5 4 2 32 32 H 1.07996 * 120.08568 * 180.28163 * 6 5 4 33 33 H 1.07995 * 120.00173 * 179.97438 * 8 7 6 34 34 H 1.08003 * 120.00161 * 359.97438 * 9 8 7 35 35 H 0.97001 * 120.00050 * 0.02562 * 12 10 9 36 36 H 1.08996 * 113.61666 * 254.53229 * 15 13 12 37 37 H 1.08999 * 113.61472 * 25.43611 * 15 13 12 38 38 H 1.08996 * 109.46920 * 32.49716 * 18 16 15 39 39 H 1.08993 * 109.47051 * 152.49988 * 18 16 15 40 40 H 1.07998 * 126.59471 * 359.97438 * 20 19 18 41 41 H 1.07999 * 125.98666 * 180.11056 * 21 20 19 42 42 H 1.07998 * 125.65360 * 179.97438 * 23 22 21 43 43 H 1.09006 * 113.61063 * 334.56306 * 24 13 12 44 44 H 1.08991 * 113.61505 * 105.46654 * 24 13 12 45 45 H 1.07998 * 120.09171 * 179.97438 * 25 7 6 46 46 H 1.07997 * 119.92157 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7221 -0.0328 -2.1421 6 6 3.1903 -0.6775 -3.2674 7 6 2.8547 -2.0163 -3.4922 8 6 3.3457 -2.7104 -4.6939 9 6 4.1206 -2.0552 -5.5814 10 6 4.6096 -2.7457 -6.7764 11 8 4.3159 -3.9110 -6.9687 12 7 5.3847 -2.0909 -7.6634 13 6 5.8734 -2.7816 -8.8594 14 1 5.9122 -3.8640 -8.7368 15 6 5.1818 -2.3311 -10.1568 16 6 6.5631 -2.4109 -10.8280 17 1 6.7899 -3.3920 -11.2450 18 6 6.8342 -1.2692 -11.8099 19 7 6.3258 -1.6334 -13.1347 20 6 7.0207 -2.2781 -14.1223 21 6 6.1792 -2.4154 -15.1648 22 7 5.0056 -1.8612 -14.8264 23 6 5.0860 -1.3908 -13.6118 24 6 7.1672 -2.1799 -9.4328 25 6 2.0505 -2.6924 -2.5695 26 6 1.5951 -2.0357 -1.4457 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5139 0.8900 29 1 3.5347 1.7702 0.0321 30 1 1.5616 2.4678 -1.2085 31 1 2.9771 1.0023 -1.9690 32 1 3.8110 -0.1487 -3.9755 33 1 3.0851 -3.7445 -4.8646 34 1 4.3809 -1.0210 -5.4109 35 1 5.6191 -1.1622 -7.5099 36 1 4.4656 -3.0557 -10.5442 37 1 4.7779 -1.3199 -10.1079 38 1 6.3324 -0.3656 -11.4640 39 1 7.9075 -1.0886 -11.8697 40 1 8.0459 -2.6143 -14.0739 41 1 6.4105 -2.8846 -16.1096 42 1 4.2927 -0.8899 -13.0769 43 1 7.3060 -1.1273 -9.1859 44 1 8.0538 -2.7824 -9.2357 45 1 1.7867 -3.7263 -2.7364 46 1 0.9743 -2.5566 -0.7319 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:21 Heat of formation + Delta-G solvation = 71.257702 kcal Electronic energy + Delta-G solvation = -26953.869682 eV Core-core repulsion = 23005.473214 eV Total energy + Delta-G solvation = -3948.396468 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.93805 -41.29228 -40.67900 -39.57888 -37.81268 -35.48906 -35.18314 -33.98097 -32.36131 -31.42723 -30.35182 -29.00390 -27.26774 -26.97956 -24.93601 -24.14982 -23.25523 -22.22299 -22.04163 -21.66056 -21.20546 -20.25197 -18.73494 -18.56827 -18.47355 -17.54478 -17.35484 -16.75215 -16.47711 -16.35466 -16.03732 -15.83791 -15.42931 -15.35514 -15.28426 -14.93183 -14.77816 -14.43841 -14.39615 -14.09658 -14.02060 -13.85245 -13.80264 -13.67503 -13.59146 -13.14754 -13.03779 -12.46170 -12.35828 -12.16115 -12.07793 -11.97548 -11.68086 -11.39957 -10.97745 -10.81317 -10.48738 -10.42562 -10.14618 -10.10539 -9.39164 -9.33089 -5.06427 -0.63511 0.25954 0.82431 1.16259 1.17918 1.54254 1.79861 1.86676 2.10353 2.20271 2.35333 2.68556 3.12326 3.22871 3.24680 3.42811 3.48347 3.55160 3.61750 3.70934 3.78371 3.81567 3.86654 3.93096 3.99392 4.04585 4.07824 4.15899 4.18014 4.25197 4.38270 4.41213 4.50157 4.55982 4.59245 4.69893 4.71646 4.81125 4.83965 4.84659 4.96170 5.01084 5.04973 5.26324 5.34784 5.36220 5.42512 5.49679 5.76062 5.87067 6.27611 6.41365 6.51411 7.17097 7.22785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.075 4.075 3 Si 0.684 3.316 4 C -0.062 4.062 5 C -0.126 4.126 6 C -0.093 4.093 7 C -0.075 4.075 8 C -0.011 4.011 9 C -0.218 4.218 10 C 0.550 3.450 11 O -0.541 6.541 12 N -0.718 5.718 13 C 0.125 3.875 14 H 0.118 0.882 15 C -0.148 4.148 16 C -0.126 4.126 17 H 0.103 0.897 18 C 0.117 3.883 19 N -0.458 5.458 20 C -0.058 4.058 21 C -0.029 4.029 22 N -0.496 5.496 23 C 0.183 3.817 24 C -0.137 4.137 25 C -0.090 4.090 26 C -0.091 4.091 27 H 0.384 0.616 28 H 0.077 0.923 29 H -0.255 1.255 30 H -0.250 1.250 31 H 0.121 0.879 32 H 0.131 0.869 33 H 0.139 0.861 34 H 0.129 0.871 35 H 0.402 0.598 36 H 0.076 0.924 37 H 0.088 0.912 38 H 0.095 0.905 39 H 0.095 0.905 40 H 0.173 0.827 41 H 0.169 0.831 42 H 0.201 0.799 43 H 0.091 0.909 44 H 0.082 0.918 45 H 0.134 0.866 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.230 4.834 6.957 9.067 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.186 4.186 3 Si 0.585 3.415 4 C -0.062 4.062 5 C -0.144 4.144 6 C -0.111 4.111 7 C -0.075 4.075 8 C -0.031 4.031 9 C -0.239 4.239 10 C 0.339 3.661 11 O -0.420 6.420 12 N -0.368 5.368 13 C 0.020 3.980 14 H 0.136 0.864 15 C -0.186 4.186 16 C -0.145 4.145 17 H 0.121 0.879 18 C -0.006 4.006 19 N -0.141 5.141 20 C -0.191 4.191 21 C -0.177 4.177 22 N -0.214 5.214 23 C -0.099 4.099 24 C -0.175 4.175 25 C -0.108 4.108 26 C -0.109 4.109 27 H 0.232 0.768 28 H 0.095 0.905 29 H -0.180 1.180 30 H -0.175 1.175 31 H 0.139 0.861 32 H 0.149 0.851 33 H 0.157 0.843 34 H 0.147 0.853 35 H 0.237 0.763 36 H 0.095 0.905 37 H 0.107 0.893 38 H 0.114 0.886 39 H 0.113 0.887 40 H 0.190 0.810 41 H 0.186 0.814 42 H 0.218 0.782 43 H 0.110 0.890 44 H 0.101 0.899 45 H 0.152 0.848 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.966 4.361 5.457 7.589 hybrid contribution 0.967 -0.057 0.424 1.057 sum 3.933 4.304 5.880 8.281 Atomic orbital electron populations 1.86489 1.17011 1.81857 1.49782 1.24730 0.85901 1.10487 0.97456 0.95221 0.80626 0.78036 0.87574 1.19552 0.97195 0.94479 0.95002 1.20808 0.99635 0.99047 0.94888 1.21289 0.99023 0.93863 0.96940 1.19049 0.99437 0.93835 0.95193 1.22416 0.90940 0.99634 0.90117 1.22879 1.03819 1.01094 0.96075 1.18365 0.78144 0.86435 0.83131 1.90842 1.57576 1.16686 1.76888 1.45838 1.52304 1.15465 1.23175 1.22444 0.93768 0.98860 0.82903 0.86421 1.23584 0.96525 1.02787 0.95738 1.22792 0.97959 0.99740 0.94048 0.87906 1.21909 1.01204 0.97859 0.79635 1.45572 1.11955 1.43730 1.12830 1.22763 1.00102 1.05909 0.90317 1.22358 0.90098 1.05260 0.99991 1.70318 1.24586 1.14635 1.11843 1.24989 0.87820 1.04509 0.92619 1.23367 0.97820 1.02296 0.94054 1.21482 0.95814 1.00176 0.93286 1.20989 0.98580 0.93728 0.97591 0.76844 0.90496 1.17957 1.17485 0.86145 0.85108 0.84305 0.85287 0.76330 0.90481 0.89345 0.88648 0.88677 0.80958 0.81374 0.78228 0.89023 0.89939 0.84774 0.84899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.21 12.74 -35.23 -0.45 -0.24 16 2 C -0.08 0.05 2.81 36.01 0.10 0.15 16 3 Si 0.68 -1.18 29.77 -169.99 -5.06 -6.24 16 4 C -0.06 -0.10 5.43 -104.50 -0.57 -0.66 16 5 C -0.13 -0.18 8.65 -39.65 -0.34 -0.52 16 6 C -0.09 -0.06 9.41 -39.11 -0.37 -0.43 16 7 C -0.08 -0.07 5.87 -105.06 -0.62 -0.69 16 8 C -0.01 -0.01 9.46 -37.16 -0.35 -0.36 16 9 C -0.22 0.02 9.41 -37.50 -0.35 -0.33 16 10 C 0.55 0.94 7.74 -12.97 -0.10 0.84 16 11 O -0.54 -3.19 15.83 5.19 0.08 -3.10 16 12 N -0.72 1.06 5.35 -54.40 -0.29 0.77 16 13 C 0.13 -0.19 4.24 -67.11 -0.28 -0.47 16 14 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 15 C -0.15 0.31 7.43 -25.92 -0.19 0.12 16 16 C -0.13 0.41 3.96 -89.80 -0.36 0.06 16 17 H 0.10 -0.20 8.14 -51.93 -0.42 -0.63 16 18 C 0.12 -0.41 5.99 -4.04 -0.02 -0.44 16 19 N -0.46 0.10 2.75 -118.58 -0.33 -0.23 16 20 C -0.06 -0.04 11.58 -16.56 -0.19 -0.23 16 21 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 22 N -0.50 -2.40 11.25 -14.67 -0.16 -2.57 16 23 C 0.18 0.31 12.56 -90.38 -1.14 -0.83 16 24 C -0.14 0.56 7.39 -25.92 -0.19 0.36 16 25 C -0.09 -0.07 9.80 -39.11 -0.38 -0.45 16 26 C -0.09 -0.11 9.59 -39.64 -0.38 -0.49 16 27 H 0.38 -2.07 8.74 45.56 0.40 -1.67 16 28 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 29 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 30 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 31 H 0.12 0.08 4.85 -52.49 -0.25 -0.17 16 32 H 0.13 -0.23 6.17 -52.49 -0.32 -0.56 16 33 H 0.14 0.17 7.52 -52.49 -0.39 -0.22 16 34 H 0.13 -0.36 6.07 -52.48 -0.32 -0.68 16 35 H 0.40 -1.76 8.71 -40.82 -0.36 -2.12 16 36 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.09 -0.27 7.90 -51.93 -0.41 -0.68 16 38 H 0.10 -0.46 7.84 -51.93 -0.41 -0.87 16 39 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 40 H 0.17 -0.37 8.06 -52.49 -0.42 -0.79 16 41 H 0.17 0.19 8.06 -52.49 -0.42 -0.24 16 42 H 0.20 -0.25 8.06 -52.49 -0.42 -0.67 16 43 H 0.09 -0.51 8.08 -51.93 -0.42 -0.93 16 44 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 45 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 46 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 LS Contribution 389.26 15.07 5.87 5.87 Total: 0.00 -11.66 389.26 -12.58 -24.25 By element: Atomic # 1 Polarization: -7.56 SS G_CDS: -6.29 Total: -13.84 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -5.95 Total: -4.66 kcal Atomic # 7 Polarization: -1.24 SS G_CDS: -0.78 Total: -2.02 kcal Atomic # 8 Polarization: -2.97 SS G_CDS: -0.37 Total: -3.34 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.06 Total: -6.24 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -11.66 -12.58 -24.25 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.504 kcal (2) G-P(sol) polarization free energy of solvation -11.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.246 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.258 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds