Wall clock time and date at job start Tue Mar 9 2021 13:06:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50699 * 109.46972 * 239.99979 * 2 1 3 5 5 C 1.38403 * 119.82891 * 119.72612 * 4 2 1 6 6 C 1.37892 * 120.17235 * 179.72187 * 5 4 2 7 7 C 1.39840 * 119.82447 * 0.54973 * 6 5 4 8 8 C 1.47207 * 120.17014 * 179.74633 * 7 6 5 9 9 C 1.34808 * 119.99893 * 359.97438 * 8 7 6 10 10 C 1.46423 * 120.00279 * 179.97438 * 9 8 7 11 11 O 1.21700 * 119.99565 * 0.02562 * 10 9 8 12 12 N 1.34771 * 120.00404 * 180.02562 * 10 9 8 13 13 C 1.46505 * 120.00252 * 180.02562 * 12 10 9 14 14 H 1.08996 * 112.84702 * 336.19596 * 13 12 10 15 15 C 1.53782 * 113.61519 * 107.49991 * 13 12 10 16 16 C 1.53781 * 87.07903 * 139.98387 * 15 13 12 17 17 H 1.08995 * 113.61768 * 89.11497 * 16 15 13 18 18 C 1.53008 * 113.61390 * 220.02311 * 16 15 13 19 19 N 1.46500 * 109.46878 * 272.49659 * 18 16 15 20 20 C 1.36886 * 126.39539 * 269.71749 * 19 18 16 21 21 C 1.34675 * 106.81317 * 179.84077 * 20 19 18 22 22 N 1.34124 * 108.02209 * 0.42100 * 21 20 19 23 23 C 1.30497 * 109.25737 * 359.72900 * 22 21 20 24 24 C 1.53781 * 113.61553 * 205.00166 * 13 12 10 25 25 C 1.39830 * 119.66034 * 359.72840 * 7 6 5 26 26 C 1.37895 * 119.83096 * 359.97438 * 25 7 6 27 27 H 0.96696 * 114.00036 * 299.99991 * 1 2 3 28 28 H 1.09001 * 109.46558 * 120.00127 * 2 1 3 29 29 H 1.48502 * 109.99925 * 178.68072 * 3 2 1 30 30 H 1.48497 * 109.99842 * 299.99834 * 3 2 1 31 31 H 1.08001 * 119.90840 * 0.02562 * 5 4 2 32 32 H 1.07996 * 120.08568 * 180.28163 * 6 5 4 33 33 H 1.07995 * 120.00173 * 179.97438 * 8 7 6 34 34 H 1.08003 * 120.00161 * 359.97438 * 9 8 7 35 35 H 0.97001 * 120.00050 * 0.02562 * 12 10 9 36 36 H 1.08996 * 113.61666 * 254.53229 * 15 13 12 37 37 H 1.08999 * 113.61472 * 25.43611 * 15 13 12 38 38 H 1.08996 * 109.46920 * 32.49716 * 18 16 15 39 39 H 1.08993 * 109.47051 * 152.49988 * 18 16 15 40 40 H 1.07998 * 126.59471 * 359.97438 * 20 19 18 41 41 H 1.07999 * 125.98666 * 180.11056 * 21 20 19 42 42 H 1.07998 * 125.65360 * 179.97438 * 23 22 21 43 43 H 1.09006 * 113.61063 * 334.56306 * 24 13 12 44 44 H 1.08991 * 113.61505 * 105.46654 * 24 13 12 45 45 H 1.07998 * 120.09171 * 179.97438 * 25 7 6 46 46 H 1.07997 * 119.92157 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7221 -0.0328 -2.1421 6 6 3.1903 -0.6775 -3.2674 7 6 2.8547 -2.0163 -3.4922 8 6 3.3457 -2.7104 -4.6939 9 6 4.1206 -2.0552 -5.5814 10 6 4.6096 -2.7457 -6.7764 11 8 4.3159 -3.9110 -6.9687 12 7 5.3847 -2.0909 -7.6634 13 6 5.8734 -2.7816 -8.8594 14 1 5.9122 -3.8640 -8.7368 15 6 5.1818 -2.3311 -10.1568 16 6 6.5631 -2.4109 -10.8280 17 1 6.7899 -3.3920 -11.2450 18 6 6.8342 -1.2692 -11.8099 19 7 6.3258 -1.6334 -13.1347 20 6 7.0207 -2.2781 -14.1223 21 6 6.1792 -2.4154 -15.1648 22 7 5.0056 -1.8612 -14.8264 23 6 5.0860 -1.3908 -13.6118 24 6 7.1672 -2.1799 -9.4328 25 6 2.0505 -2.6924 -2.5695 26 6 1.5951 -2.0357 -1.4457 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5139 0.8900 29 1 3.5347 1.7702 0.0321 30 1 1.5616 2.4678 -1.2085 31 1 2.9771 1.0023 -1.9690 32 1 3.8110 -0.1487 -3.9755 33 1 3.0851 -3.7445 -4.8646 34 1 4.3809 -1.0210 -5.4109 35 1 5.6191 -1.1622 -7.5099 36 1 4.4656 -3.0557 -10.5442 37 1 4.7779 -1.3199 -10.1079 38 1 6.3324 -0.3656 -11.4640 39 1 7.9075 -1.0886 -11.8697 40 1 8.0459 -2.6143 -14.0739 41 1 6.4105 -2.8846 -16.1096 42 1 4.2927 -0.8899 -13.0769 43 1 7.3060 -1.1273 -9.1859 44 1 8.0538 -2.7824 -9.2357 45 1 1.7867 -3.7263 -2.7364 46 1 0.9743 -2.5566 -0.7319 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14468608_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:21 Heat of formation + Delta-G solvation = 71.892485 kcal Electronic energy + Delta-G solvation = -26953.842155 eV Core-core repulsion = 23005.473214 eV Total energy + Delta-G solvation = -3948.368941 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.96031 -41.29212 -40.66380 -39.57509 -37.73358 -35.46523 -35.23314 -33.99676 -32.37582 -31.42730 -30.40373 -28.91028 -27.23303 -26.75819 -24.88325 -24.15972 -23.22336 -22.28178 -22.06694 -21.65643 -21.10159 -20.19604 -18.74387 -18.50486 -18.37447 -17.49080 -17.35050 -16.72331 -16.37470 -16.34712 -16.02698 -15.89969 -15.43916 -15.31314 -15.24392 -14.95092 -14.83701 -14.42909 -14.30987 -14.11652 -14.03340 -13.85778 -13.64121 -13.53292 -13.44618 -13.06463 -12.98033 -12.41029 -12.27719 -12.08168 -12.00861 -11.94803 -11.52389 -11.44286 -11.12057 -10.92328 -10.51018 -10.32703 -10.15072 -10.12160 -9.45769 -9.34006 -4.93933 -0.66851 0.22456 0.76978 1.14039 1.29231 1.63710 1.90369 1.95088 2.13234 2.14983 2.22274 2.66654 3.33860 3.35467 3.44445 3.46042 3.61603 3.68176 3.72700 3.74911 3.87265 3.87397 4.03555 4.06018 4.09646 4.10331 4.18826 4.20562 4.30744 4.40990 4.47337 4.59810 4.67084 4.68981 4.70812 4.75391 4.79408 4.84432 4.92153 4.95800 4.99578 5.03662 5.16882 5.25492 5.33964 5.34493 5.46510 5.52391 5.75081 5.82049 6.30714 6.48602 6.87981 7.15295 7.15689 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.084 4.084 3 Si 0.774 3.226 4 C -0.081 4.081 5 C -0.144 4.144 6 C -0.095 4.095 7 C -0.082 4.082 8 C -0.021 4.021 9 C -0.208 4.208 10 C 0.542 3.458 11 O -0.594 6.594 12 N -0.699 5.699 13 C 0.113 3.887 14 H 0.087 0.913 15 C -0.146 4.146 16 C -0.116 4.116 17 H 0.086 0.914 18 C 0.115 3.885 19 N -0.453 5.453 20 C -0.049 4.049 21 C -0.067 4.067 22 N -0.547 5.547 23 C 0.175 3.825 24 C -0.115 4.115 25 C -0.099 4.099 26 C -0.103 4.103 27 H 0.404 0.596 28 H 0.095 0.905 29 H -0.285 1.285 30 H -0.296 1.296 31 H 0.123 0.877 32 H 0.155 0.845 33 H 0.126 0.874 34 H 0.161 0.839 35 H 0.420 0.580 36 H 0.049 0.951 37 H 0.106 0.894 38 H 0.117 0.883 39 H 0.115 0.885 40 H 0.201 0.799 41 H 0.172 0.828 42 H 0.223 0.777 43 H 0.120 0.880 44 H 0.085 0.915 45 H 0.145 0.855 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.540 6.729 8.064 11.442 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.194 4.194 3 Si 0.680 3.320 4 C -0.081 4.081 5 C -0.162 4.162 6 C -0.113 4.113 7 C -0.082 4.082 8 C -0.041 4.041 9 C -0.229 4.229 10 C 0.332 3.668 11 O -0.476 6.476 12 N -0.350 5.350 13 C 0.007 3.993 14 H 0.105 0.895 15 C -0.184 4.184 16 C -0.136 4.136 17 H 0.105 0.895 18 C -0.006 4.006 19 N -0.135 5.135 20 C -0.182 4.182 21 C -0.214 4.214 22 N -0.266 5.266 23 C -0.108 4.108 24 C -0.154 4.154 25 C -0.116 4.116 26 C -0.121 4.121 27 H 0.255 0.745 28 H 0.113 0.887 29 H -0.212 1.212 30 H -0.224 1.224 31 H 0.141 0.859 32 H 0.173 0.827 33 H 0.144 0.856 34 H 0.178 0.822 35 H 0.258 0.742 36 H 0.068 0.932 37 H 0.124 0.876 38 H 0.135 0.865 39 H 0.134 0.866 40 H 0.218 0.782 41 H 0.189 0.811 42 H 0.239 0.761 43 H 0.138 0.862 44 H 0.103 0.897 45 H 0.163 0.837 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.288 6.288 6.600 10.074 hybrid contribution 0.561 -0.661 0.051 0.868 sum 4.850 5.628 6.651 9.971 Atomic orbital electron populations 1.86438 1.17133 1.82455 1.51430 1.24906 0.85984 1.11255 0.97240 0.94263 0.77398 0.75382 0.84996 1.19950 0.97291 0.94910 0.95972 1.20994 1.00287 0.99365 0.95510 1.21564 0.98890 0.93731 0.97106 1.19119 0.99693 0.94177 0.95223 1.22355 0.91767 0.99319 0.90634 1.23030 1.02864 1.02180 0.94777 1.18737 0.78149 0.85943 0.83946 1.90821 1.59686 1.18992 1.78120 1.45734 1.50788 1.16128 1.22319 1.22467 0.96055 0.97652 0.83095 0.89506 1.23590 0.96667 1.02876 0.95301 1.22642 0.97034 0.99321 0.94617 0.89526 1.22189 1.02630 0.98158 0.77647 1.45756 1.11253 1.42750 1.13712 1.23169 1.00853 1.04535 0.89666 1.22639 0.90546 1.06824 1.01365 1.70235 1.26081 1.16434 1.13895 1.25395 0.89031 1.04211 0.92153 1.23300 0.96144 1.03688 0.92265 1.21722 0.95733 1.00879 0.93302 1.21158 0.98986 0.93941 0.97979 0.74464 0.88674 1.21211 1.22390 0.85944 0.82746 0.85587 0.82153 0.74200 0.93231 0.87585 0.86463 0.86643 0.78208 0.81097 0.76106 0.86216 0.89680 0.83701 0.84178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.69 12.74 -148.98 -1.90 -1.21 16 2 C -0.08 0.15 2.81 71.24 0.20 0.35 16 3 Si 0.77 -2.78 29.77 68.60 2.04 -0.74 16 4 C -0.08 -0.27 5.43 -19.78 -0.11 -0.38 16 5 C -0.14 -0.44 8.65 22.23 0.19 -0.25 16 6 C -0.10 -0.09 9.41 22.58 0.21 0.12 16 7 C -0.08 -0.19 5.87 -20.15 -0.12 -0.31 16 8 C -0.02 -0.05 9.46 23.84 0.23 0.18 16 9 C -0.21 0.11 9.41 23.61 0.22 0.34 16 10 C 0.54 2.12 7.74 86.37 0.67 2.79 16 11 O -0.59 -8.28 15.83 -4.35 -0.07 -8.35 16 12 N -0.70 2.63 5.35 -444.26 -2.38 0.25 16 13 C 0.11 -0.35 4.24 45.52 0.19 -0.15 16 14 H 0.09 0.31 7.46 -2.39 -0.02 0.29 16 15 C -0.15 0.66 7.43 31.12 0.23 0.89 16 16 C -0.12 0.91 3.96 -10.26 -0.04 0.87 16 17 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 18 C 0.11 -1.10 5.99 86.38 0.52 -0.59 16 19 N -0.45 0.65 2.75 -529.06 -1.46 -0.81 16 20 C -0.05 -0.04 11.58 83.09 0.96 0.92 16 21 C -0.07 -0.47 11.87 83.53 0.99 0.52 16 22 N -0.55 -6.01 11.25 -200.31 -2.25 -8.27 16 23 C 0.17 0.60 12.56 180.26 2.26 2.87 16 24 C -0.12 1.18 7.39 31.12 0.23 1.41 16 25 C -0.10 -0.24 9.80 22.57 0.22 -0.02 16 26 C -0.10 -0.30 9.59 22.23 0.21 -0.09 16 27 H 0.40 -4.73 8.74 -74.06 -0.65 -5.38 16 28 H 0.10 -0.54 7.96 -2.39 -0.02 -0.56 16 29 H -0.28 -0.35 7.11 99.48 0.71 0.36 16 30 H -0.30 -1.15 7.11 99.48 0.71 -0.44 16 31 H 0.12 0.21 4.85 -2.91 -0.01 0.20 16 32 H 0.16 -0.80 6.17 -2.91 -0.02 -0.81 16 33 H 0.13 0.58 7.52 -2.91 -0.02 0.56 16 34 H 0.16 -1.23 6.07 -2.91 -0.02 -1.25 16 35 H 0.42 -4.69 8.71 -92.71 -0.81 -5.50 16 36 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 37 H 0.11 -0.85 7.90 -2.39 -0.02 -0.87 16 38 H 0.12 -1.57 7.84 -2.39 -0.02 -1.59 16 39 H 0.12 -1.48 8.14 -2.39 -0.02 -1.50 16 40 H 0.20 -1.18 8.06 -2.91 -0.02 -1.20 16 41 H 0.17 0.71 8.06 -2.91 -0.02 0.69 16 42 H 0.22 -0.65 8.06 -2.91 -0.02 -0.67 16 43 H 0.12 -1.83 8.08 -2.38 -0.02 -1.85 16 44 H 0.08 -0.82 8.14 -2.39 -0.02 -0.84 16 45 H 0.15 -0.13 8.06 -2.91 -0.02 -0.16 16 46 H 0.14 0.07 8.06 -2.91 -0.02 0.05 16 Total: 0.00 -31.30 389.26 0.87 -30.44 By element: Atomic # 1 Polarization: -20.38 SS G_CDS: -0.40 Total: -20.78 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: 7.28 Total: 9.47 kcal Atomic # 7 Polarization: -2.74 SS G_CDS: -6.09 Total: -8.83 kcal Atomic # 8 Polarization: -7.59 SS G_CDS: -1.97 Total: -9.56 kcal Atomic # 14 Polarization: -2.78 SS G_CDS: 2.04 Total: -0.74 kcal Total: -31.30 0.87 -30.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.329 kcal (2) G-P(sol) polarization free energy of solvation -31.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.867 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.437 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds