Wall clock time and date at job start Tue Mar 9 2021 13:06:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47197 * 2 1 4 4 C 1.50703 * 109.47408 * 119.99853 * 2 1 3 5 5 C 1.37818 * 119.93707 * 15.00348 * 4 2 1 6 6 C 1.39671 * 119.87687 * 179.97438 * 5 4 2 7 7 C 1.47726 * 120.11812 * 179.97438 * 6 5 4 8 8 O 1.21573 * 119.99916 * 0.02562 * 7 6 5 9 9 N 1.34777 * 120.00147 * 180.02562 * 7 6 5 10 10 C 1.46498 * 119.99828 * 180.27844 * 9 7 6 11 11 H 1.09000 * 112.84813 * 334.38493 * 10 9 7 12 12 C 1.53783 * 113.61758 * 105.58441 * 10 9 7 13 13 C 1.53953 * 87.01967 * 139.94777 * 12 10 9 14 14 H 1.09005 * 113.61350 * 89.20090 * 13 12 10 15 15 C 1.53000 * 113.66852 * 220.06443 * 13 12 10 16 16 N 1.46489 * 109.47233 * 272.56386 * 15 13 12 17 17 C 1.36886 * 126.40071 * 269.70858 * 16 15 13 18 18 C 1.34663 * 106.82042 * 179.84592 * 17 16 15 19 19 N 1.34125 * 108.02004 * 0.42547 * 18 17 16 20 20 C 1.30501 * 109.25853 * 359.73088 * 19 18 17 21 21 C 1.53779 * 113.61166 * 203.19166 * 10 9 7 22 22 C 1.39627 * 119.76367 * 0.25753 * 6 5 4 23 23 C 1.37857 * 119.87864 * 359.46116 * 22 6 5 24 24 C 1.38628 * 120.11887 * 0.54029 * 23 22 6 25 25 F 1.35099 * 119.88005 * 179.72103 * 24 23 22 26 26 H 0.96701 * 114.00409 * 299.99518 * 1 2 3 27 27 H 1.08999 * 109.47200 * 239.99957 * 2 1 3 28 28 H 1.48501 * 109.99807 * 300.00540 * 3 2 1 29 29 H 1.48503 * 109.99542 * 61.31646 * 3 2 1 30 30 H 1.07997 * 120.06185 * 0.02562 * 5 4 2 31 31 H 0.97001 * 119.99727 * 359.97438 * 9 7 6 32 32 H 1.08995 * 113.61864 * 254.52969 * 12 10 9 33 33 H 1.08999 * 113.60888 * 25.43011 * 12 10 9 34 34 H 1.09000 * 109.46768 * 32.56466 * 15 13 12 35 35 H 1.09000 * 109.46908 * 152.56157 * 15 13 12 36 36 H 1.08007 * 126.58588 * 359.97438 * 17 16 15 37 37 H 1.08002 * 125.98973 * 180.12166 * 18 17 16 38 38 H 1.08001 * 125.65354 * 180.02562 * 20 19 18 39 39 H 1.08996 * 113.61592 * 334.56671 * 21 10 9 40 40 H 1.09000 * 113.61393 * 105.38671 * 21 10 9 41 41 H 1.08002 * 120.06009 * 179.74568 * 22 6 5 42 42 H 1.08007 * 119.93827 * 180.25648 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.0731 -1.4946 1.9705 6 6 1.5402 -2.1529 3.1104 7 6 0.6247 -2.9944 3.9079 8 8 -0.5375 -3.1153 3.5721 9 7 1.0778 -3.6281 5.0077 10 6 0.1713 -4.4674 5.7951 11 1 -0.8734 -4.1740 5.6926 12 6 0.4090 -5.9752 5.6077 13 6 0.1668 -6.1199 7.1211 14 1 -0.8793 -6.2799 7.3826 15 6 1.1081 -7.1159 7.8014 16 7 0.5348 -8.4616 7.7228 17 6 -0.2968 -9.0451 8.6403 18 6 -0.5857 -10.2760 8.1769 19 7 0.0595 -10.4433 7.0130 20 6 0.7328 -9.3606 6.7347 21 6 0.6180 -4.6558 7.2545 22 6 2.8741 -2.0079 3.4968 23 6 3.7254 -1.2257 2.7460 24 6 3.2566 -0.5746 1.6155 25 9 4.0938 0.1954 0.8864 26 1 -0.3934 0.4416 0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 1.5613 2.4679 -1.2084 29 1 1.5878 2.4585 1.2243 30 1 0.0414 -1.6007 1.6692 31 1 2.0051 -3.5319 5.2754 32 1 -0.3483 -6.4638 4.9946 33 1 1.4259 -6.2222 5.3027 34 1 2.0753 -7.1030 7.2988 35 1 1.2383 -6.8368 8.8470 36 1 -0.6543 -8.6024 9.5583 37 1 -1.2213 -11.0032 8.6604 38 1 1.3462 -9.2084 5.8589 39 1 1.6921 -4.5416 7.4006 40 1 0.0300 -4.0797 7.9689 41 1 3.2393 -2.5114 4.3797 42 1 4.7585 -1.1162 3.0417 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:30 Heat of formation + Delta-G solvation = 12.963938 kcal Electronic energy + Delta-G solvation = -27139.751982 eV Core-core repulsion = 23003.137491 eV Total energy + Delta-G solvation = -4136.614491 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -50.42983 -42.96364 -41.67840 -40.52007 -39.28230 -37.82945 -35.58708 -34.24440 -32.78029 -32.03342 -30.37308 -28.98638 -27.23469 -27.04829 -25.62832 -23.72259 -23.38720 -22.24751 -21.87838 -21.61242 -20.95158 -19.42042 -18.73657 -18.62454 -18.01694 -17.89679 -17.22643 -17.14874 -16.62688 -16.24463 -16.16786 -15.93796 -15.83763 -15.46385 -15.29951 -15.21566 -14.80806 -14.47908 -14.46254 -14.26142 -14.10941 -13.94645 -13.85631 -13.65120 -13.51816 -13.17479 -12.86737 -12.49817 -12.47196 -12.21842 -11.94640 -11.73380 -11.22413 -11.02356 -10.83342 -10.52160 -10.30889 -10.15943 -9.86324 -9.41370 -4.82046 -0.62187 -0.13466 1.13759 1.15141 1.52654 1.57787 1.75842 1.88627 1.94513 2.33306 2.46980 2.80961 3.04366 3.08474 3.17118 3.21716 3.37988 3.42539 3.47198 3.54275 3.75122 3.77351 3.84385 3.90236 3.96683 3.97871 4.09734 4.31677 4.32269 4.37901 4.45622 4.51140 4.57180 4.63195 4.65996 4.70206 4.76794 4.81945 4.88444 4.91751 4.98077 5.28256 5.32301 5.45352 5.84922 6.24167 6.25156 6.25802 7.00075 7.20730 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.074 4.074 3 Si 0.677 3.323 4 C -0.154 4.154 5 C -0.024 4.024 6 C -0.142 4.142 7 C 0.562 3.438 8 O -0.527 6.527 9 N -0.717 5.717 10 C 0.126 3.874 11 H 0.119 0.881 12 C -0.148 4.148 13 C -0.126 4.126 14 H 0.103 0.897 15 C 0.117 3.883 16 N -0.458 5.458 17 C -0.058 4.058 18 C -0.029 4.029 19 N -0.496 5.496 20 C 0.183 3.817 21 C -0.136 4.136 22 C -0.061 4.061 23 C -0.149 4.149 24 C 0.124 3.876 25 F -0.104 7.104 26 H 0.378 0.622 27 H 0.128 0.872 28 H -0.248 1.248 29 H -0.256 1.256 30 H 0.154 0.846 31 H 0.401 0.599 32 H 0.078 0.922 33 H 0.089 0.911 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.173 0.827 37 H 0.169 0.831 38 H 0.201 0.799 39 H 0.092 0.908 40 H 0.083 0.917 41 H 0.138 0.862 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.309 3.234 4.804 8.564 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.183 4.183 3 Si 0.575 3.425 4 C -0.155 4.155 5 C -0.042 4.042 6 C -0.146 4.146 7 C 0.349 3.651 8 O -0.404 6.404 9 N -0.368 5.368 10 C 0.021 3.979 11 H 0.137 0.863 12 C -0.186 4.186 13 C -0.145 4.145 14 H 0.121 0.879 15 C -0.006 4.006 16 N -0.141 5.141 17 C -0.191 4.191 18 C -0.177 4.177 19 N -0.214 5.214 20 C -0.099 4.099 21 C -0.175 4.175 22 C -0.080 4.080 23 C -0.168 4.168 24 C 0.104 3.896 25 F -0.082 7.082 26 H 0.226 0.774 27 H 0.146 0.854 28 H -0.173 1.173 29 H -0.180 1.180 30 H 0.171 0.829 31 H 0.237 0.763 32 H 0.096 0.904 33 H 0.107 0.893 34 H 0.114 0.886 35 H 0.113 0.887 36 H 0.190 0.810 37 H 0.186 0.814 38 H 0.218 0.782 39 H 0.110 0.890 40 H 0.102 0.898 41 H 0.155 0.845 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 5.388 3.132 3.517 7.156 hybrid contribution -0.364 0.621 1.122 1.333 sum 5.024 3.753 4.639 7.801 Atomic orbital electron populations 1.86615 1.17020 1.80104 1.49516 1.24952 0.84587 1.11217 0.97559 0.94771 0.92708 0.73511 0.81468 1.20400 0.92935 1.02026 1.00152 1.20987 1.00969 0.91094 0.91195 1.19974 0.94315 1.02131 0.98150 1.18177 0.87349 0.79096 0.80439 1.90832 1.17720 1.62685 1.69173 1.45865 1.14067 1.49520 1.27358 1.22488 0.95963 0.89425 0.90032 0.86338 1.23618 1.03088 0.96372 0.95559 1.22819 1.00824 0.94246 0.96630 0.87867 1.21901 0.96698 0.78858 1.03152 1.45566 1.36800 1.13431 1.18341 1.22759 1.01408 0.96706 0.98194 1.22360 1.04198 0.96482 0.94652 1.70321 1.11278 1.24152 1.15609 1.24994 1.03651 0.85716 0.95564 1.23357 1.02423 0.95218 0.96474 1.21158 0.91852 0.96282 0.98661 1.21091 1.01841 0.99128 0.94727 1.17650 0.87243 0.93183 0.91526 1.91200 1.69765 1.71268 1.75990 0.77392 0.85420 1.17282 1.18012 0.82859 0.76340 0.90362 0.89278 0.88627 0.88655 0.80957 0.81373 0.78210 0.88976 0.89816 0.84461 0.83250 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.60 11.64 -35.23 -0.41 -1.01 16 2 C -0.07 0.01 2.96 36.01 0.11 0.12 16 3 Si 0.68 -0.12 29.58 -169.99 -5.03 -5.15 16 4 C -0.15 0.05 5.13 -104.61 -0.54 -0.48 16 5 C -0.02 -0.01 8.78 -39.20 -0.34 -0.35 16 6 C -0.14 0.09 5.87 -104.97 -0.62 -0.53 16 7 C 0.56 0.37 7.77 -12.38 -0.10 0.28 16 8 O -0.53 -2.55 15.96 5.30 0.08 -2.47 16 9 N -0.72 1.98 5.31 -54.00 -0.29 1.70 16 10 C 0.13 -0.34 4.21 -67.12 -0.28 -0.62 16 11 H 0.12 -0.05 7.50 -51.93 -0.39 -0.44 16 12 C -0.15 0.46 7.45 -25.83 -0.19 0.27 16 13 C -0.13 0.53 3.96 -89.72 -0.36 0.17 16 14 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 15 C 0.12 -0.51 5.99 -4.05 -0.02 -0.53 16 16 N -0.46 0.39 2.75 -118.58 -0.33 0.06 16 17 C -0.06 -0.01 11.58 -16.56 -0.19 -0.20 16 18 C -0.03 -0.07 11.87 -17.82 -0.21 -0.28 16 19 N -0.50 -2.17 11.25 -14.67 -0.16 -2.33 16 20 C 0.18 0.20 12.56 -90.37 -1.14 -0.93 16 21 C -0.14 0.71 7.39 -25.92 -0.19 0.52 16 22 C -0.06 0.20 9.54 -39.20 -0.37 -0.17 16 23 C -0.15 0.46 10.01 -39.58 -0.40 0.06 16 24 C 0.12 -0.17 6.67 -39.28 -0.26 -0.43 16 25 F -0.10 0.18 13.70 2.25 0.03 0.21 16 26 H 0.38 -0.63 8.43 45.56 0.38 -0.25 16 27 H 0.13 -0.11 7.96 -51.93 -0.41 -0.52 16 28 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 29 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 30 H 0.15 0.21 6.66 -52.49 -0.35 -0.14 16 31 H 0.40 -2.32 6.74 -40.82 -0.28 -2.59 16 32 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.09 -0.37 7.90 -51.93 -0.41 -0.78 16 34 H 0.10 -0.55 7.85 -51.93 -0.41 -0.96 16 35 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 36 H 0.17 -0.46 8.06 -52.48 -0.42 -0.88 16 37 H 0.17 0.12 8.06 -52.49 -0.42 -0.30 16 38 H 0.20 -0.38 8.06 -52.49 -0.42 -0.80 16 39 H 0.09 -0.63 8.07 -51.93 -0.42 -1.05 16 40 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 41 H 0.14 -0.92 6.40 -52.49 -0.34 -1.25 16 42 H 0.15 -0.79 8.06 -52.48 -0.42 -1.22 16 LS Contribution 358.47 15.07 5.40 5.40 Total: 0.00 -10.24 358.47 -11.00 -21.24 By element: Atomic # 1 Polarization: -9.32 SS G_CDS: -5.20 Total: -14.52 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -5.10 Total: -3.13 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -0.78 Total: -0.58 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.33 Total: -3.48 kcal Atomic # 9 Polarization: 0.18 SS G_CDS: 0.03 Total: 0.21 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.03 Total: -5.15 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -10.24 -11.00 -21.24 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.203 kcal (2) G-P(sol) polarization free energy of solvation -10.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.962 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.998 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.239 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds