Wall clock time and date at job start Tue Mar 9 2021 13:06:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86306 * 109.46799 * 2 1 4 4 C 1.50703 * 109.47200 * 119.99699 * 2 1 3 5 5 C 1.34833 * 125.65105 * 65.32614 * 4 2 1 6 6 C 1.40795 * 107.04981 * 180.13580 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.56997 * 6 5 4 8 8 C 1.47569 * 125.94728 * 180.26566 * 7 6 5 9 9 C 1.39919 * 119.95145 * 359.72585 * 8 7 6 10 10 C 1.36433 * 120.27573 * 179.71740 * 9 8 7 11 11 C 1.39880 * 120.18186 * 0.55763 * 10 9 8 12 12 C 1.47296 * 120.04121 * 179.69704 * 11 10 9 13 13 O 1.21620 * 119.99718 * 180.02562 * 12 11 10 14 14 N 1.34771 * 120.00375 * 0.02562 * 12 11 10 15 15 C 1.46502 * 120.00522 * 180.02562 * 14 12 11 16 16 H 1.09005 * 112.84505 * 23.80289 * 15 14 12 17 17 C 1.53774 * 113.61713 * 155.00175 * 15 14 12 18 18 C 1.53780 * 87.08254 * 139.98140 * 17 15 14 19 19 H 1.09005 * 113.61307 * 89.11531 * 18 17 15 20 20 C 1.52998 * 113.61856 * 219.93344 * 18 17 15 21 21 N 1.46498 * 109.47337 * 185.00050 * 20 18 17 22 22 C 1.36880 * 126.39632 * 269.71206 * 21 20 18 23 23 C 1.34664 * 106.82010 * 179.84117 * 22 21 20 24 24 N 1.34131 * 108.01867 * 0.42493 * 23 22 21 25 25 C 1.30497 * 109.25627 * 359.73123 * 24 23 22 26 26 C 1.53778 * 113.61354 * 252.50275 * 15 14 12 27 27 C 1.40397 * 119.91115 * 359.72127 * 11 10 9 28 28 O 1.35679 * 120.14056 * 179.97438 * 27 11 10 29 29 C 1.38279 * 119.72393 * 359.97438 * 27 11 10 30 30 O 1.34236 * 125.65151 * 244.97919 * 4 2 1 31 31 H 0.96706 * 114.00179 * 299.99661 * 1 2 3 32 32 H 1.08993 * 109.47236 * 240.00444 * 2 1 3 33 33 H 1.48500 * 110.00116 * 300.00122 * 3 2 1 34 34 H 1.48498 * 110.00076 * 61.31870 * 3 2 1 35 35 H 1.07995 * 126.47650 * 359.97438 * 5 4 2 36 36 H 1.08002 * 126.63743 * 179.83926 * 6 5 4 37 37 H 1.08005 * 119.86467 * 0.02562 * 9 8 7 38 38 H 1.07995 * 119.90845 * 180.27889 * 10 9 8 39 39 H 0.97010 * 119.99953 * 0.02562 * 14 12 11 40 40 H 1.09004 * 113.61345 * 254.52777 * 17 15 14 41 41 H 1.09005 * 113.61645 * 25.43541 * 17 15 14 42 42 H 1.09001 * 109.46929 * 305.00119 * 20 18 17 43 43 H 1.09005 * 109.46965 * 64.99474 * 20 18 17 44 44 H 1.08002 * 126.59252 * 359.97438 * 22 21 20 45 45 H 1.08003 * 125.99556 * 180.18735 * 23 22 21 46 46 H 1.07996 * 125.65537 * 180.02562 * 25 24 23 47 47 H 1.09002 * 113.61821 * 334.56287 * 26 15 14 48 48 H 1.09000 * 113.61662 * 105.46590 * 26 15 14 49 49 H 0.96700 * 113.99352 * 270.02073 * 28 27 11 50 50 H 1.08003 * 120.09519 * 180.02562 * 29 27 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7621 -2.0192 1.5065 6 6 2.3810 -2.2629 2.7475 7 6 2.9084 -1.0784 3.1616 8 6 3.6580 -0.8542 4.4128 9 6 3.8741 -1.9164 5.2976 10 6 4.5711 -1.7178 6.4535 11 6 5.0648 -0.4472 6.7675 12 6 5.8113 -0.2349 8.0195 13 8 6.2397 0.8702 8.2919 14 7 6.0194 -1.2651 8.8630 15 6 6.7613 -1.0538 10.1085 16 1 6.7339 -0.0180 10.4469 17 6 6.4186 -2.0709 11.2098 18 6 7.9181 -2.0889 11.5504 19 1 8.2085 -1.3362 12.2834 20 6 8.4539 -3.4823 11.8856 21 7 9.8523 -3.3788 12.3096 22 6 10.9539 -3.4530 11.5004 23 6 12.0314 -3.3060 12.2947 24 7 11.5999 -3.1558 13.5558 25 6 10.2957 -3.1984 13.5723 26 6 8.1735 -1.6624 10.0951 27 6 4.8475 0.6254 5.8881 28 8 5.3239 1.8598 6.1883 29 6 4.1460 0.4185 4.7146 30 8 2.6271 -0.1462 2.2303 31 1 -0.3934 0.4417 0.7651 32 1 1.7923 -0.5137 -0.8900 33 1 1.5614 2.4680 -1.2085 34 1 1.5878 2.4586 1.2242 35 1 1.2468 -2.7433 0.8930 36 1 2.4316 -3.2078 3.2679 37 1 3.4918 -2.8987 5.0622 38 1 4.7383 -2.5428 7.1300 39 1 5.6779 -2.1467 8.6455 40 1 5.7953 -1.6607 12.0044 41 1 6.0466 -3.0210 10.8263 42 1 7.8610 -3.9153 12.6914 43 1 8.3877 -4.1190 11.0033 44 1 10.9581 -3.5990 10.4303 45 1 13.0625 -3.3122 11.9733 46 1 9.6739 -3.1044 14.4503 47 1 8.2812 -2.5008 9.4069 48 1 8.9668 -0.9224 9.9898 49 1 4.7071 2.4071 6.6934 50 1 3.9757 1.2392 4.0335 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:41 Heat of formation + Delta-G solvation = 38.307603 kcal Electronic energy + Delta-G solvation = -34897.396801 eV Core-core repulsion = 30053.754844 eV Total energy + Delta-G solvation = -4843.641956 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.156 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -43.80350 -42.93999 -41.72712 -40.62002 -39.11145 -38.24219 -37.89642 -35.47946 -34.44589 -34.14119 -33.18489 -31.39553 -30.61657 -30.35536 -28.88962 -27.15451 -27.00079 -25.03426 -24.19548 -23.80933 -22.48179 -22.22175 -22.05061 -21.71362 -21.40120 -20.99414 -19.76077 -18.84629 -18.62433 -18.50139 -17.78347 -17.58305 -17.46013 -16.80150 -16.64953 -16.59058 -16.15060 -16.10345 -15.89479 -15.72455 -15.47522 -15.22795 -14.95545 -14.82118 -14.48652 -14.36977 -14.30540 -14.14344 -14.07420 -13.83597 -13.81958 -13.69147 -13.63478 -13.60983 -13.08219 -12.99906 -12.81986 -12.47760 -12.18032 -12.10353 -11.89378 -11.67413 -11.20498 -10.89614 -10.86542 -10.81478 -10.69402 -10.48508 -10.17313 -10.04090 -9.38909 -9.09316 -5.03953 -0.86605 0.02783 0.58459 1.05295 1.16428 1.36151 1.39409 1.64474 1.78955 1.86546 1.89427 1.98990 2.35207 2.55028 2.93783 3.08660 3.10763 3.20603 3.26439 3.41876 3.46114 3.48761 3.59509 3.77680 3.80842 3.82275 3.86436 3.87218 3.93236 4.01118 4.07603 4.13575 4.24930 4.30089 4.36481 4.45872 4.49561 4.52118 4.59176 4.60190 4.70195 4.70722 4.76741 4.81003 4.84338 4.91070 4.98159 5.02586 5.09793 5.31187 5.34618 5.35538 5.39422 5.87226 5.88292 6.16406 6.27658 6.33830 6.61652 7.12240 7.22646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.698 3.302 4 C -0.043 4.043 5 C -0.173 4.173 6 C -0.177 4.177 7 C 0.022 3.978 8 C 0.031 3.969 9 C -0.117 4.117 10 C -0.064 4.064 11 C -0.167 4.167 12 C 0.560 3.440 13 O -0.516 6.516 14 N -0.719 5.719 15 C 0.127 3.873 16 H 0.119 0.881 17 C -0.137 4.137 18 C -0.126 4.126 19 H 0.103 0.897 20 C 0.117 3.883 21 N -0.458 5.458 22 C -0.054 4.054 23 C -0.030 4.030 24 N -0.495 5.495 25 C 0.180 3.820 26 C -0.146 4.146 27 C 0.179 3.821 28 O -0.474 6.474 29 C -0.141 4.141 30 O -0.162 6.162 31 H 0.381 0.619 32 H 0.139 0.861 33 H -0.247 1.247 34 H -0.255 1.255 35 H 0.156 0.844 36 H 0.156 0.844 37 H 0.139 0.861 38 H 0.136 0.864 39 H 0.399 0.601 40 H 0.083 0.917 41 H 0.091 0.909 42 H 0.097 0.903 43 H 0.093 0.907 44 H 0.172 0.828 45 H 0.169 0.831 46 H 0.203 0.797 47 H 0.087 0.913 48 H 0.076 0.924 49 H 0.399 0.601 50 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.717 -4.732 -1.284 6.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.597 3.403 4 C -0.093 4.093 5 C -0.192 4.192 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.031 3.969 9 C -0.135 4.135 10 C -0.083 4.083 11 C -0.170 4.170 12 C 0.347 3.653 13 O -0.391 6.391 14 N -0.372 5.372 15 C 0.022 3.978 16 H 0.137 0.863 17 C -0.175 4.175 18 C -0.146 4.146 19 H 0.122 0.878 20 C -0.006 4.006 21 N -0.141 5.141 22 C -0.187 4.187 23 C -0.178 4.178 24 N -0.213 5.213 25 C -0.103 4.103 26 C -0.185 4.185 27 C 0.133 3.867 28 O -0.285 6.285 29 C -0.159 4.159 30 O -0.059 6.059 31 H 0.229 0.771 32 H 0.156 0.844 33 H -0.171 1.171 34 H -0.179 1.179 35 H 0.174 0.826 36 H 0.174 0.826 37 H 0.157 0.843 38 H 0.153 0.847 39 H 0.235 0.765 40 H 0.102 0.898 41 H 0.109 0.891 42 H 0.115 0.885 43 H 0.111 0.889 44 H 0.189 0.811 45 H 0.186 0.814 46 H 0.220 0.780 47 H 0.106 0.894 48 H 0.095 0.905 49 H 0.258 0.742 50 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -3.594 -3.152 -1.270 4.946 hybrid contribution -2.172 -0.923 -0.092 2.362 sum -5.766 -4.075 -1.362 7.191 Atomic orbital electron populations 1.86671 1.16624 1.80153 1.49239 1.24358 0.84024 1.12207 0.93826 0.94412 0.91486 0.73299 0.81116 1.22951 1.00510 0.93790 0.92048 1.21586 1.04021 0.95646 0.97958 1.21912 1.01987 0.98358 0.97307 1.20321 1.03833 0.87572 0.91021 1.17757 0.95546 0.93673 0.89942 1.20703 1.00232 0.98703 0.93815 1.20795 0.95432 0.95474 0.96589 1.20482 1.04874 0.95120 0.96562 1.18018 0.79512 0.84615 0.83114 1.90853 1.49635 1.23670 1.74988 1.45884 1.57697 1.12126 1.21444 1.22458 0.91191 1.00779 0.83396 0.86322 1.23371 0.95617 0.99905 0.98641 1.22796 0.96390 0.97013 0.98364 0.87848 1.21904 0.78984 0.97419 1.02304 1.45563 1.06925 1.53474 1.08123 1.22723 0.86328 1.11652 0.97976 1.22352 0.99148 1.07284 0.89012 1.70317 1.08873 1.19526 1.22616 1.25033 0.91942 1.05468 0.87826 1.23565 0.98062 1.01451 0.95417 1.18289 0.91269 0.85786 0.91396 1.84779 1.44616 1.22726 1.76401 1.21601 0.98684 0.97544 0.98086 1.83953 1.57531 1.37908 1.26479 0.77109 0.84386 1.17125 1.17940 0.82647 0.82618 0.84336 0.84680 0.76509 0.89836 0.89052 0.88459 0.88857 0.81117 0.81415 0.78041 0.89446 0.90489 0.74229 0.83813 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.02 12.88 -35.23 -0.45 -0.47 16 2 C -0.03 0.04 2.98 36.01 0.11 0.14 16 3 Si 0.70 -0.79 32.11 -169.99 -5.46 -6.25 16 4 C -0.04 0.00 6.21 -35.51 -0.22 -0.22 16 5 C -0.17 0.02 10.78 -39.82 -0.43 -0.41 16 6 C -0.18 0.10 10.26 -39.38 -0.40 -0.30 16 7 C 0.02 0.01 7.02 -36.54 -0.26 -0.25 16 8 C 0.03 -0.01 5.87 -104.95 -0.62 -0.63 16 9 C -0.12 0.27 9.48 -39.60 -0.38 -0.11 16 10 C -0.06 0.17 9.47 -39.62 -0.38 -0.21 16 11 C -0.17 -0.02 5.89 -104.79 -0.62 -0.64 16 12 C 0.56 0.73 7.75 -12.58 -0.10 0.63 16 13 O -0.52 -2.66 14.74 -16.69 -0.25 -2.91 16 14 N -0.72 1.56 5.30 -54.13 -0.29 1.27 16 15 C 0.13 -0.28 4.24 -67.12 -0.28 -0.57 16 16 H 0.12 -0.01 7.46 -51.93 -0.39 -0.40 16 17 C -0.14 0.66 7.39 -25.92 -0.19 0.47 16 18 C -0.13 0.49 3.96 -89.81 -0.36 0.13 16 19 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 20 C 0.12 -0.48 5.99 -4.04 -0.02 -0.50 16 21 N -0.46 0.31 2.75 -118.58 -0.33 -0.02 16 22 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 23 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 24 N -0.50 -2.21 11.25 -14.67 -0.17 -2.38 16 25 C 0.18 0.21 12.56 -90.38 -1.14 -0.93 16 26 C -0.15 0.38 7.43 -25.92 -0.19 0.19 16 27 C 0.18 0.21 6.71 -38.75 -0.26 -0.05 16 28 O -0.47 -0.96 11.56 -40.69 -0.47 -1.43 16 29 C -0.14 -0.05 9.65 -39.06 -0.38 -0.43 16 30 O -0.16 -0.15 8.79 4.70 0.04 -0.11 16 31 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 32 H 0.14 -0.36 7.96 -51.93 -0.41 -0.77 16 33 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 34 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 35 H 0.16 -0.20 8.06 -52.49 -0.42 -0.62 16 36 H 0.16 -0.46 7.24 -52.49 -0.38 -0.84 16 37 H 0.14 -0.63 6.95 -52.48 -0.36 -1.00 16 38 H 0.14 -0.80 6.37 -52.49 -0.33 -1.14 16 39 H 0.40 -2.02 6.73 -40.82 -0.27 -2.30 16 40 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 41 H 0.09 -0.58 8.08 -51.93 -0.42 -1.00 16 42 H 0.10 -0.53 8.14 -51.93 -0.42 -0.96 16 43 H 0.09 -0.48 7.85 -51.93 -0.41 -0.89 16 44 H 0.17 -0.36 8.06 -52.49 -0.42 -0.79 16 45 H 0.17 0.17 8.06 -52.48 -0.42 -0.25 16 46 H 0.20 -0.42 8.06 -52.49 -0.42 -0.85 16 47 H 0.09 -0.30 7.90 -51.93 -0.41 -0.71 16 48 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 49 H 0.40 -0.68 9.06 45.56 0.41 -0.26 16 50 H 0.14 -0.02 7.90 -52.48 -0.41 -0.43 16 LS Contribution 427.71 15.07 6.45 6.45 Total: 0.00 -12.72 427.71 -13.01 -25.73 By element: Atomic # 1 Polarization: -10.11 SS G_CDS: -5.58 Total: -15.69 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: -6.51 Total: -4.19 kcal Atomic # 7 Polarization: -0.34 SS G_CDS: -0.78 Total: -1.12 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -1.13 Total: -4.92 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.46 Total: -6.25 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -12.72 -13.01 -25.73 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.036 kcal (2) G-P(sol) polarization free energy of solvation -12.722 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.314 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.006 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.728 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds