Wall clock time and date at job start Tue Mar 9 2021 13:07:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38973 * 119.95815 * 2 1 4 4 O 1.35710 * 119.91280 * 359.97438 * 3 2 1 5 5 C 1.39016 * 120.17838 * 179.97438 * 3 2 1 6 6 C 1.50697 * 119.95917 * 180.02562 * 5 3 2 7 7 O 1.42894 * 109.47529 * 74.99208 * 6 5 3 8 8 Si 1.86303 * 109.47438 * 194.99768 * 6 5 3 9 9 C 1.37681 * 120.08807 * 359.77716 * 5 3 2 10 10 C 1.39759 * 119.90926 * 0.45239 * 9 5 3 11 11 C 1.47606 * 120.08544 * 179.80801 * 10 9 5 12 12 O 1.21588 * 120.00151 * 359.72137 * 11 10 9 13 13 N 1.34778 * 119.99605 * 179.72452 * 11 10 9 14 14 C 1.46502 * 119.99671 * 180.02562 * 13 11 10 15 15 H 1.08998 * 112.90669 * 336.24268 * 14 13 11 16 16 C 1.53778 * 113.61780 * 107.50275 * 14 13 11 17 17 C 1.53778 * 87.08449 * 139.97851 * 16 14 13 18 18 H 1.09000 * 113.61263 * 89.11673 * 17 16 14 19 19 C 1.52997 * 113.61422 * 220.01977 * 17 16 14 20 20 N 1.46499 * 109.47084 * 272.49417 * 19 17 16 21 21 C 1.36883 * 126.39618 * 89.99848 * 20 19 17 22 22 C 1.34670 * 106.81976 * 180.02562 * 21 20 19 23 23 N 1.34131 * 108.01720 * 0.02562 * 22 21 20 24 24 C 1.30499 * 109.25456 * 359.72314 * 23 22 21 25 25 C 1.53784 * 87.08081 * 334.56700 * 17 16 14 26 26 C 1.37724 * 119.95202 * 179.97438 * 2 1 3 27 27 H 1.08999 * 109.46786 * 270.02430 * 1 2 3 28 28 H 1.09001 * 109.47039 * 30.02514 * 1 2 3 29 29 H 1.09000 * 109.46723 * 150.02410 * 1 2 3 30 30 H 0.96703 * 113.99567 * 90.00143 * 4 3 2 31 31 H 1.09004 * 109.46811 * 314.99658 * 6 5 3 32 32 H 0.96700 * 114.00577 * 180.02562 * 7 6 5 33 33 H 1.48497 * 109.99723 * 299.99927 * 8 6 5 34 34 H 1.48497 * 109.99811 * 61.31340 * 8 6 5 35 35 H 1.08004 * 120.04841 * 180.23135 * 9 5 3 36 36 H 0.97000 * 120.00419 * 359.97438 * 13 11 10 37 37 H 1.08999 * 113.61111 * 254.52914 * 16 14 13 38 38 H 1.08999 * 113.61280 * 25.34297 * 16 14 13 39 39 H 1.09004 * 109.47170 * 32.49387 * 19 17 16 40 40 H 1.08995 * 109.47328 * 152.49879 * 19 17 16 41 41 H 1.07998 * 126.59475 * 0.04022 * 21 20 19 42 42 H 1.07997 * 125.98961 * 180.02562 * 22 21 20 43 43 H 1.08000 * 125.64519 * 180.28911 * 24 23 22 44 44 H 1.09004 * 113.61451 * 270.88641 * 25 17 16 45 45 H 1.08994 * 113.61477 * 139.97943 * 25 17 16 46 46 H 1.07991 * 120.05274 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2040 0.0000 4 8 1.5198 2.3778 -0.0005 5 6 3.5912 1.2094 0.0005 6 6 4.3387 2.5179 0.0011 7 8 4.2716 3.1043 1.3025 8 14 6.1201 2.2157 -0.4528 9 6 4.2860 0.0208 0.0057 10 6 3.5918 -1.1922 0.0008 11 6 4.3328 -2.4688 0.0021 12 8 5.5487 -2.4660 0.0022 13 7 3.6616 -3.6375 0.0030 14 6 4.3970 -4.9046 0.0048 15 1 5.4050 -4.8107 -0.3992 16 6 4.3391 -5.6487 1.3493 17 6 4.1913 -6.9453 0.5359 18 1 5.1431 -7.4093 0.2772 19 6 3.1902 -7.9345 1.1360 20 7 3.8729 -8.7899 2.1099 21 6 4.0167 -8.5422 3.4484 22 6 4.7046 -9.5785 3.9647 23 7 4.9739 -10.4353 2.9685 24 6 4.4739 -9.9721 1.8556 25 6 3.6020 -6.0791 -0.5898 26 6 2.1947 -1.1933 0.0005 27 1 -0.3633 0.0004 1.0277 28 1 -0.3633 0.8898 -0.5142 29 1 -0.3633 -0.8902 -0.5135 30 1 1.3221 2.7181 0.8828 31 1 3.8882 3.1940 -0.7257 32 1 4.7323 3.9513 1.3765 33 1 6.7456 1.2953 0.5305 34 1 6.2052 1.6354 -1.8170 35 1 5.3660 0.0257 0.0099 36 1 2.6916 -3.6398 0.0032 37 1 5.2668 -5.5939 1.9189 38 1 3.4607 -5.4037 1.9464 39 1 2.3901 -7.3855 1.6325 40 1 2.7692 -8.5518 0.3425 41 1 3.6491 -7.6814 3.9870 42 1 4.9894 -9.6985 4.9995 43 1 4.5331 -10.4535 0.8907 44 1 2.5214 -5.9529 -0.5235 45 1 3.9347 -6.3718 -1.5857 46 1 1.6548 -2.1286 0.0005 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:10 Heat of formation + Delta-G solvation = 12.162028 kcal Electronic energy + Delta-G solvation = -29192.433059 eV Core-core repulsion = 25051.017959 eV Total energy + Delta-G solvation = -4141.415100 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.95493 -41.84594 -40.96291 -39.59290 -37.81469 -37.56913 -35.57508 -34.34024 -34.02100 -31.88159 -30.38813 -28.91220 -28.18060 -27.03292 -26.91024 -25.47486 -23.59715 -22.24307 -22.09518 -21.82784 -21.57639 -20.84928 -19.60057 -18.71708 -18.52498 -18.43342 -17.89721 -17.06876 -16.77396 -16.60627 -16.15815 -16.03281 -15.80879 -15.39232 -15.30165 -15.18915 -14.98441 -14.83233 -14.52924 -14.37109 -14.16339 -13.98111 -13.83882 -13.74776 -13.68998 -13.56017 -13.17758 -13.07199 -12.97352 -12.63547 -12.50860 -12.18579 -11.95614 -11.70110 -11.57798 -11.07545 -10.83148 -10.50617 -10.38501 -10.26333 -10.08245 -9.74754 -9.40300 -5.01306 -0.47510 -0.03159 1.14978 1.23543 1.52979 1.66343 1.77493 1.93884 1.98853 2.33870 2.45977 3.00534 3.08539 3.17216 3.19366 3.39118 3.44525 3.50088 3.55781 3.69453 3.78862 3.84541 3.85242 3.91154 3.99534 4.07312 4.11772 4.21552 4.31903 4.34390 4.45042 4.46231 4.49408 4.53094 4.56560 4.59540 4.68963 4.77990 4.82708 4.90102 4.94599 4.99004 5.02268 5.17795 5.30859 5.33714 5.43604 5.85810 6.26140 6.28370 6.48819 6.51596 7.03669 7.21289 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.117 4.117 3 C 0.163 3.837 4 O -0.488 6.488 5 C -0.105 4.105 6 C -0.065 4.065 7 O -0.547 6.547 8 Si 0.679 3.321 9 C -0.053 4.053 10 C -0.140 4.140 11 C 0.563 3.437 12 O -0.532 6.532 13 N -0.716 5.716 14 C 0.124 3.876 15 H 0.119 0.881 16 C -0.146 4.146 17 C -0.125 4.125 18 H 0.104 0.896 19 C 0.117 3.883 20 N -0.458 5.458 21 C -0.054 4.054 22 C -0.030 4.030 23 N -0.495 5.495 24 C 0.180 3.820 25 C -0.136 4.136 26 C -0.066 4.066 27 H 0.074 0.926 28 H 0.078 0.922 29 H 0.071 0.929 30 H 0.400 0.600 31 H 0.081 0.919 32 H 0.385 0.615 33 H -0.245 1.245 34 H -0.252 1.252 35 H 0.139 0.861 36 H 0.401 0.599 37 H 0.076 0.924 38 H 0.087 0.913 39 H 0.093 0.907 40 H 0.098 0.902 41 H 0.171 0.829 42 H 0.169 0.831 43 H 0.203 0.797 44 H 0.092 0.908 45 H 0.084 0.916 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.730 4.552 -1.527 7.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.117 4.117 3 C 0.117 3.883 4 O -0.299 6.299 5 C -0.105 4.105 6 C -0.175 4.175 7 O -0.354 6.354 8 Si 0.580 3.420 9 C -0.071 4.071 10 C -0.143 4.143 11 C 0.351 3.649 12 O -0.409 6.409 13 N -0.367 5.367 14 C 0.019 3.981 15 H 0.137 0.863 16 C -0.185 4.185 17 C -0.145 4.145 18 H 0.122 0.878 19 C -0.006 4.006 20 N -0.141 5.141 21 C -0.187 4.187 22 C -0.178 4.178 23 N -0.213 5.213 24 C -0.103 4.103 25 C -0.175 4.175 26 C -0.084 4.084 27 H 0.093 0.907 28 H 0.097 0.903 29 H 0.090 0.910 30 H 0.259 0.741 31 H 0.099 0.901 32 H 0.233 0.767 33 H -0.170 1.170 34 H -0.177 1.177 35 H 0.157 0.843 36 H 0.237 0.763 37 H 0.095 0.905 38 H 0.106 0.894 39 H 0.111 0.889 40 H 0.116 0.884 41 H 0.189 0.811 42 H 0.186 0.814 43 H 0.220 0.780 44 H 0.110 0.890 45 H 0.102 0.898 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -4.202 2.710 -2.256 5.486 hybrid contribution -1.528 0.694 0.410 1.728 sum -5.730 3.404 -1.847 6.916 Atomic orbital electron populations 1.20738 0.89493 1.03879 1.02912 1.20207 0.97408 0.91966 1.02143 1.18260 0.88630 0.85433 0.95941 1.84642 1.75566 1.35621 1.34120 1.19620 0.93194 0.93942 1.03780 1.24533 1.10144 0.93840 0.89020 1.86423 1.79399 1.40784 1.28797 0.95396 0.77967 0.88096 0.80556 1.20999 1.00278 0.90552 0.95302 1.19776 0.93568 0.93260 1.07728 1.18177 0.87242 0.83687 0.75831 1.90817 1.13409 1.87501 1.49162 1.45852 1.10100 1.05255 1.75518 1.22506 0.97766 0.80881 0.96898 0.86270 1.23567 1.03476 0.94313 0.97146 1.22791 1.00015 0.94418 0.97271 0.87795 1.21903 0.94481 0.92678 0.91536 1.45565 1.42396 1.18054 1.08093 1.22722 1.08525 1.03563 0.83893 1.22355 1.03371 0.92737 0.99330 1.70319 1.22332 1.29926 0.98715 1.25038 0.98956 0.86192 1.00066 1.23371 1.00651 0.94518 0.98945 1.21075 0.92384 0.97875 0.97113 0.90742 0.90284 0.91018 0.74135 0.90098 0.76702 1.17010 1.17689 0.84349 0.76327 0.90473 0.89402 0.88855 0.88412 0.81136 0.81403 0.78028 0.89002 0.89754 0.84924 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.26 9.78 36.01 0.35 0.61 16 2 C -0.12 0.01 5.89 -104.54 -0.62 -0.61 16 3 C 0.16 0.21 6.66 -39.02 -0.26 -0.05 16 4 O -0.49 -0.01 11.84 -18.84 -0.22 -0.23 16 5 C -0.10 -0.25 5.30 -104.54 -0.55 -0.81 16 6 C -0.06 -0.02 2.36 36.00 0.09 0.06 16 7 O -0.55 0.23 12.86 -35.23 -0.45 -0.23 16 8 Si 0.68 0.08 30.20 -169.99 -5.13 -5.05 16 9 C -0.05 -0.19 8.20 -39.22 -0.32 -0.51 16 10 C -0.14 -0.31 5.88 -104.95 -0.62 -0.92 16 11 C 0.56 1.64 7.76 -12.44 -0.10 1.55 16 12 O -0.53 -3.71 15.94 5.29 0.08 -3.63 16 13 N -0.72 0.73 5.30 -54.03 -0.29 0.44 16 14 C 0.12 -0.18 4.24 -67.12 -0.28 -0.46 16 15 H 0.12 0.09 7.46 -51.93 -0.39 -0.29 16 16 C -0.15 0.31 7.43 -25.92 -0.19 0.12 16 17 C -0.13 0.43 3.96 -89.81 -0.36 0.08 16 18 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 19 C 0.12 -0.44 5.99 -4.04 -0.02 -0.46 16 20 N -0.46 0.18 2.75 -118.58 -0.33 -0.14 16 21 C -0.05 -0.03 11.58 -16.56 -0.19 -0.23 16 22 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 23 N -0.50 -2.30 11.25 -14.67 -0.17 -2.47 16 24 C 0.18 0.25 12.56 -90.38 -1.14 -0.89 16 25 C -0.14 0.58 7.39 -25.91 -0.19 0.38 16 26 C -0.07 0.03 9.18 -39.22 -0.36 -0.33 16 27 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 28 H 0.08 -0.13 7.52 -51.93 -0.39 -0.52 16 29 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 30 H 0.40 -1.36 9.06 45.56 0.41 -0.95 16 31 H 0.08 -0.05 7.82 -51.93 -0.41 -0.46 16 32 H 0.38 -1.99 8.74 45.56 0.40 -1.59 16 33 H -0.25 -0.88 6.74 56.52 0.38 -0.50 16 34 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 35 H 0.14 0.68 4.47 -52.48 -0.23 0.44 16 36 H 0.40 -1.59 6.75 -40.82 -0.28 -1.87 16 37 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.09 -0.26 7.90 -51.93 -0.41 -0.67 16 39 H 0.09 -0.45 7.85 -51.93 -0.41 -0.85 16 40 H 0.10 -0.50 8.14 -51.93 -0.42 -0.93 16 41 H 0.17 -0.32 8.06 -52.49 -0.42 -0.74 16 42 H 0.17 0.20 8.06 -52.49 -0.42 -0.23 16 43 H 0.20 -0.38 8.06 -52.49 -0.42 -0.80 16 44 H 0.09 -0.53 8.08 -51.93 -0.42 -0.95 16 45 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 46 H 0.13 -0.52 6.39 -52.49 -0.34 -0.86 16 LS Contribution 385.04 15.07 5.80 5.80 Total: 0.00 -12.46 385.04 -11.15 -23.61 By element: Atomic # 1 Polarization: -9.86 SS G_CDS: -5.48 Total: -15.33 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -4.97 Total: -2.76 kcal Atomic # 7 Polarization: -1.40 SS G_CDS: -0.78 Total: -2.17 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.59 Total: -4.09 kcal Atomic # 14 Polarization: 0.08 SS G_CDS: -5.13 Total: -5.05 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -12.46 -11.15 -23.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.769 kcal (2) G-P(sol) polarization free energy of solvation -12.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.314 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.152 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.607 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.162 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds