Wall clock time and date at job start Tue Mar 9 2021 13:07:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46903 * 110.99801 * 2 1 4 4 C 1.39040 * 110.99813 * 123.95362 * 2 1 3 5 5 C 1.39203 * 119.92942 * 120.00222 * 4 2 1 6 6 C 1.50699 * 119.96371 * 0.02562 * 5 4 2 7 7 O 1.42897 * 109.47397 * 74.98070 * 6 5 4 8 8 Si 1.86302 * 109.46775 * 194.97604 * 6 5 4 9 9 C 1.37632 * 120.06657 * 179.97438 * 5 4 2 10 10 C 1.39773 * 119.93443 * 359.97438 * 9 5 4 11 11 C 1.47520 * 120.07127 * 179.97438 * 10 9 5 12 12 O 1.21603 * 119.99920 * 0.02562 * 11 10 9 13 13 N 1.34777 * 120.00124 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99828 * 180.27945 * 13 11 10 15 15 H 1.09000 * 112.84813 * 334.38493 * 14 13 11 16 16 C 1.53783 * 113.61758 * 105.58441 * 14 13 11 17 17 C 1.53953 * 87.01967 * 139.94777 * 16 14 13 18 18 H 1.09005 * 113.61350 * 89.20090 * 17 16 14 19 19 C 1.53000 * 113.66852 * 220.06443 * 17 16 14 20 20 N 1.46489 * 109.47233 * 272.56386 * 19 17 16 21 21 C 1.36886 * 126.40071 * 269.70858 * 20 19 17 22 22 C 1.34663 * 106.82042 * 179.84592 * 21 20 19 23 23 N 1.34125 * 108.02004 * 0.42547 * 22 21 20 24 24 C 1.30501 * 109.25853 * 359.73088 * 23 22 21 25 25 C 1.53779 * 113.61166 * 203.19166 * 14 13 11 26 26 C 1.39816 * 119.86065 * 0.27736 * 10 9 5 27 27 C 1.37590 * 119.92807 * 359.46370 * 26 10 9 28 28 H 1.09000 * 109.47300 * 296.04760 * 1 2 3 29 29 H 1.09006 * 109.47339 * 56.04717 * 1 2 3 30 30 H 1.08995 * 109.47141 * 176.04002 * 1 2 3 31 31 H 1.08993 * 109.47056 * 183.95068 * 3 2 1 32 32 H 1.08994 * 109.47159 * 303.95631 * 3 2 1 33 33 H 1.09003 * 109.47030 * 63.95182 * 3 2 1 34 34 H 1.08997 * 109.47105 * 314.96832 * 6 5 4 35 35 H 0.96705 * 113.99068 * 299.99631 * 7 6 5 36 36 H 1.48502 * 109.99921 * 59.99766 * 8 6 5 37 37 H 1.48501 * 109.99959 * 181.31505 * 8 6 5 38 38 H 1.07999 * 120.03219 * 180.02562 * 9 5 4 39 39 H 0.97001 * 119.99727 * 359.97438 * 13 11 10 40 40 H 1.08995 * 113.61864 * 254.52969 * 16 14 13 41 41 H 1.08999 * 113.60888 * 25.43011 * 16 14 13 42 42 H 1.09000 * 109.46768 * 32.56466 * 19 17 16 43 43 H 1.09000 * 109.46908 * 152.56157 * 19 17 16 44 44 H 1.08007 * 126.58588 * 359.97438 * 21 20 19 45 45 H 1.08002 * 125.98973 * 180.12166 * 22 21 20 46 46 H 1.08001 * 125.65354 * 180.02562 * 24 23 22 47 47 H 1.08996 * 113.61592 * 334.56671 * 25 14 13 48 48 H 1.09000 * 113.61393 * 105.38671 * 25 14 13 49 49 H 1.08001 * 120.03659 * 179.72158 * 26 10 9 50 50 H 1.08004 * 119.96347 * 180.22790 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.9673 -0.7250 1.0767 5 6 2.7793 -1.8330 0.8518 6 6 3.1175 -2.2445 -0.5579 7 8 4.0865 -1.3437 -1.0977 8 14 3.8129 -3.9729 -0.5503 9 6 3.2745 -2.5524 1.9155 10 6 2.9616 -2.1691 3.2228 11 6 3.4903 -2.9383 4.3652 12 8 4.1994 -3.9067 4.1701 13 7 3.1873 -2.5678 5.6251 14 6 3.7173 -3.3281 6.7596 15 1 3.9446 -4.3635 6.5061 16 6 4.8568 -2.6114 7.5031 17 6 4.2203 -3.1243 8.8077 18 1 4.5857 -4.1039 9.1161 19 6 4.2369 -2.0994 9.9435 20 7 5.4980 -2.2080 10.6808 21 6 5.7375 -3.0046 11.7679 22 6 7.0192 -2.7995 12.1266 23 7 7.5453 -1.8952 11.2873 24 6 6.6399 -1.5363 10.4186 25 6 2.8862 -3.1767 8.0446 26 6 2.1414 -1.0589 3.4453 27 6 1.6539 -0.3406 2.3778 28 1 -0.3634 0.4513 0.9233 29 1 -0.3634 0.5740 -0.8525 30 1 -0.3633 -1.0252 -0.0710 31 1 3.0827 1.3433 -0.0708 32 1 1.5898 1.9163 -0.8524 33 1 1.7043 1.8724 0.9233 34 1 2.2161 -2.2183 -1.1702 35 1 3.7916 -0.4233 -1.1321 36 1 2.8146 -4.9195 0.0089 37 1 4.1800 -4.3787 -1.9308 38 1 3.9048 -3.4117 1.7403 39 1 2.6219 -1.7951 5.7807 40 1 5.8420 -3.0322 7.3020 41 1 4.8300 -1.5265 7.4013 42 1 4.1437 -1.0958 9.5286 43 1 3.4034 -2.2921 10.6190 44 1 5.0342 -3.6712 12.2450 45 1 7.5320 -3.2757 12.9492 46 1 6.7807 -0.8210 9.6218 47 1 2.3197 -2.2467 8.0912 48 1 2.2816 -4.0528 8.2793 49 1 1.8942 -0.7629 4.4541 50 1 1.0233 0.5193 2.5491 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:32 Heat of formation + Delta-G solvation = 69.377542 kcal Electronic energy + Delta-G solvation = -31180.442887 eV Core-core repulsion = 26983.689881 eV Total energy + Delta-G solvation = -4196.753006 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.94435 -41.85354 -41.00489 -39.59221 -37.71285 -37.29952 -35.53861 -34.17261 -32.74517 -31.41396 -30.35152 -28.94492 -28.82952 -27.01930 -26.96016 -26.37765 -24.35612 -23.18765 -22.87466 -22.22650 -21.78381 -21.39083 -20.79313 -19.13994 -18.58489 -18.03352 -17.87961 -17.54090 -16.90163 -16.59244 -16.46668 -16.09258 -16.02842 -15.88632 -15.48355 -15.40792 -15.18670 -15.14897 -14.78413 -14.65198 -14.43683 -14.12500 -14.08074 -13.97736 -13.82277 -13.70484 -13.62018 -13.29354 -13.18291 -13.03591 -12.91232 -12.76398 -12.45534 -12.17794 -11.93837 -11.69548 -11.33589 -11.16866 -10.94432 -10.81566 -10.49715 -10.23242 -10.15712 -9.88020 -9.81011 -9.39598 -4.76495 -0.46261 0.07488 1.15725 1.46617 1.62094 1.75656 1.78849 1.98001 2.07409 2.35040 2.54867 2.58508 3.09769 3.20441 3.41565 3.42733 3.49161 3.55803 3.62847 3.79781 3.83060 3.86255 3.92340 3.93710 3.98888 4.00635 4.10063 4.10646 4.12601 4.28472 4.31059 4.35721 4.36067 4.47228 4.51111 4.54546 4.58865 4.65822 4.69665 4.70439 4.72637 4.80674 4.84072 4.92410 4.98849 5.05426 5.13660 5.33723 5.34534 5.45197 5.53295 5.86643 6.05427 6.27129 6.32079 6.64100 7.08037 7.22483 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.518 5.518 3 C 0.023 3.977 4 C 0.125 3.875 5 C -0.098 4.098 6 C -0.062 4.062 7 O -0.533 6.533 8 Si 0.730 3.270 9 C -0.042 4.042 10 C -0.134 4.134 11 C 0.561 3.439 12 O -0.527 6.527 13 N -0.717 5.717 14 C 0.126 3.874 15 H 0.119 0.881 16 C -0.147 4.147 17 C -0.126 4.126 18 H 0.103 0.897 19 C 0.117 3.883 20 N -0.458 5.458 21 C -0.058 4.058 22 C -0.029 4.029 23 N -0.496 5.496 24 C 0.183 3.817 25 C -0.137 4.137 26 C -0.072 4.072 27 C -0.154 4.154 28 H 0.035 0.965 29 H 0.079 0.921 30 H 0.072 0.928 31 H 0.075 0.925 32 H 0.080 0.920 33 H 0.036 0.964 34 H 0.081 0.919 35 H 0.364 0.636 36 H -0.251 1.251 37 H -0.252 1.252 38 H 0.147 0.853 39 H 0.400 0.600 40 H 0.078 0.922 41 H 0.088 0.912 42 H 0.095 0.905 43 H 0.095 0.905 44 H 0.173 0.827 45 H 0.169 0.831 46 H 0.201 0.799 47 H 0.091 0.909 48 H 0.083 0.917 49 H 0.128 0.872 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.082 4.129 1.543 8.342 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.239 5.239 3 C -0.123 4.123 4 C 0.031 3.969 5 C -0.100 4.100 6 C -0.172 4.172 7 O -0.338 6.338 8 Si 0.629 3.371 9 C -0.061 4.061 10 C -0.137 4.137 11 C 0.349 3.651 12 O -0.404 6.404 13 N -0.369 5.369 14 C 0.021 3.979 15 H 0.137 0.863 16 C -0.186 4.186 17 C -0.145 4.145 18 H 0.121 0.879 19 C -0.006 4.006 20 N -0.141 5.141 21 C -0.191 4.191 22 C -0.177 4.177 23 N -0.214 5.214 24 C -0.099 4.099 25 C -0.175 4.175 26 C -0.091 4.091 27 C -0.174 4.174 28 H 0.054 0.946 29 H 0.097 0.903 30 H 0.091 0.909 31 H 0.093 0.907 32 H 0.098 0.902 33 H 0.054 0.946 34 H 0.099 0.901 35 H 0.212 0.788 36 H -0.175 1.175 37 H -0.177 1.177 38 H 0.164 0.836 39 H 0.236 0.764 40 H 0.097 0.903 41 H 0.107 0.893 42 H 0.113 0.887 43 H 0.113 0.887 44 H 0.190 0.810 45 H 0.186 0.814 46 H 0.218 0.782 47 H 0.109 0.891 48 H 0.101 0.899 49 H 0.146 0.854 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -5.502 2.157 0.562 5.936 hybrid contribution -2.830 1.794 0.528 3.392 sum -8.332 3.952 1.089 9.286 Atomic orbital electron populations 1.22501 0.85006 1.03094 1.01498 1.59463 1.09235 1.14646 1.40530 1.22553 1.01256 0.86843 1.01679 1.18846 0.95151 0.93944 0.88996 1.20266 0.97759 0.95337 0.96596 1.25282 0.96537 1.05266 0.90067 1.86743 1.41254 1.21039 1.84794 0.92898 0.88531 0.71585 0.84124 1.21047 0.96302 0.98265 0.90513 1.19886 1.02114 0.98047 0.93670 1.18190 0.80129 0.83943 0.82863 1.90829 1.37002 1.27281 1.85246 1.45870 1.52924 1.32787 1.05316 1.22478 0.94282 0.97592 0.83519 0.86269 1.23615 0.99616 1.01138 0.94236 1.22820 0.97927 1.00114 0.93660 0.87854 1.21902 0.84313 1.00553 0.93846 1.45567 1.11807 1.32837 1.23909 1.22756 1.00034 1.02477 0.93807 1.22357 0.92630 1.00685 1.02031 1.70321 1.30750 1.14386 1.05902 1.24993 0.81741 1.01154 1.02019 1.23358 0.96221 1.03588 0.94363 1.21129 0.95291 0.93628 0.99081 1.21579 1.01963 1.01026 0.92805 0.94617 0.90264 0.90948 0.90659 0.90164 0.94564 0.90145 0.78760 1.17503 1.17666 0.83623 0.76423 0.90301 0.89344 0.88666 0.88699 0.80974 0.81382 0.78209 0.89079 0.89851 0.85422 0.85272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.34 60.07 0.56 0.50 16 2 N -0.52 0.67 3.70 -186.86 -0.69 -0.02 16 3 C 0.02 -0.06 9.09 60.07 0.55 0.48 16 4 C 0.13 -0.04 4.66 -83.86 -0.39 -0.43 16 5 C -0.10 -0.09 5.28 -104.49 -0.55 -0.64 16 6 C -0.06 -0.08 2.29 36.00 0.08 0.00 16 7 O -0.53 -1.04 12.65 -35.23 -0.45 -1.49 16 8 Si 0.73 1.11 30.17 -169.99 -5.13 -4.02 16 9 C -0.04 -0.06 8.19 -39.23 -0.32 -0.38 16 10 C -0.13 -0.04 5.88 -104.95 -0.62 -0.66 16 11 C 0.56 0.67 7.76 -12.48 -0.10 0.57 16 12 O -0.53 -2.59 15.96 5.27 0.08 -2.51 16 13 N -0.72 1.59 5.31 -54.06 -0.29 1.30 16 14 C 0.13 -0.30 4.21 -67.12 -0.28 -0.58 16 15 H 0.12 -0.03 7.50 -51.93 -0.39 -0.42 16 16 C -0.15 0.43 7.45 -25.83 -0.19 0.24 16 17 C -0.13 0.50 3.96 -89.72 -0.36 0.15 16 18 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 19 C 0.12 -0.48 5.99 -4.05 -0.02 -0.51 16 20 N -0.46 0.33 2.75 -118.58 -0.33 0.00 16 21 C -0.06 -0.01 11.58 -16.56 -0.19 -0.20 16 22 C -0.03 -0.07 11.87 -17.82 -0.21 -0.29 16 23 N -0.50 -2.19 11.25 -14.67 -0.16 -2.36 16 24 C 0.18 0.22 12.56 -90.37 -1.14 -0.92 16 25 C -0.14 0.66 7.39 -25.92 -0.19 0.47 16 26 C -0.07 0.15 9.53 -39.23 -0.37 -0.23 16 27 C -0.15 0.26 8.53 -39.45 -0.34 -0.08 16 28 H 0.04 -0.10 7.10 -51.93 -0.37 -0.47 16 29 H 0.08 -0.24 8.12 -51.93 -0.42 -0.66 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.07 -0.21 7.41 -51.93 -0.38 -0.59 16 32 H 0.08 -0.28 8.12 -51.93 -0.42 -0.70 16 33 H 0.04 -0.11 7.32 -51.93 -0.38 -0.49 16 34 H 0.08 0.11 7.78 -51.93 -0.40 -0.29 16 35 H 0.36 -0.04 7.47 45.56 0.34 0.30 16 36 H -0.25 -0.76 7.11 56.52 0.40 -0.35 16 37 H -0.25 -1.01 7.11 56.52 0.40 -0.61 16 38 H 0.15 0.19 4.70 -52.49 -0.25 -0.06 16 39 H 0.40 -1.99 6.73 -40.82 -0.27 -2.27 16 40 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 41 H 0.09 -0.34 7.90 -51.93 -0.41 -0.75 16 42 H 0.10 -0.52 7.85 -51.93 -0.41 -0.93 16 43 H 0.09 -0.49 8.14 -51.93 -0.42 -0.91 16 44 H 0.17 -0.44 8.06 -52.48 -0.42 -0.86 16 45 H 0.17 0.13 8.06 -52.49 -0.42 -0.29 16 46 H 0.20 -0.36 8.06 -52.49 -0.42 -0.78 16 47 H 0.09 -0.58 8.07 -51.93 -0.42 -1.00 16 48 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 49 H 0.13 -0.65 6.39 -52.49 -0.34 -0.99 16 50 H 0.13 -0.41 6.99 -52.48 -0.37 -0.78 16 LS Contribution 405.89 15.07 6.12 6.12 Total: 0.00 -9.52 405.89 -12.40 -21.92 By element: Atomic # 1 Polarization: -8.97 SS G_CDS: -7.47 Total: -16.44 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: -4.08 Total: -2.50 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: -1.47 Total: -1.07 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -0.36 Total: -4.00 kcal Atomic # 14 Polarization: 1.11 SS G_CDS: -5.13 Total: -4.02 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.52 -12.40 -21.92 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.294 kcal (2) G-P(sol) polarization free energy of solvation -9.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.773 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.396 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.916 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.378 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds