Wall clock time and date at job start Tue Mar 9 2021 13:07:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86299 * 109.47104 * 2 1 4 4 C 1.50698 * 109.47127 * 119.99944 * 2 1 3 5 5 C 1.34500 * 125.49439 * 210.26747 * 4 2 1 6 6 C 1.46747 * 106.36394 * 180.14233 * 5 4 2 7 7 C 1.47266 * 126.96895 * 179.88273 * 6 5 4 8 8 O 1.21633 * 120.00190 * 179.41203 * 7 6 5 9 9 N 1.34777 * 119.99891 * 359.68281 * 7 6 5 10 10 C 1.46496 * 119.99875 * 179.97438 * 9 7 6 11 11 H 1.08999 * 112.85295 * 336.20319 * 10 9 7 12 12 C 1.53782 * 113.61172 * 107.50721 * 10 9 7 13 13 C 1.53778 * 87.08331 * 139.98114 * 12 10 9 14 14 H 1.08999 * 113.61632 * 89.11422 * 13 12 10 15 15 C 1.53009 * 113.69357 * 220.00793 * 13 12 10 16 16 N 1.46496 * 109.47096 * 272.53181 * 15 13 12 17 17 C 1.36885 * 126.39364 * 90.00003 * 16 15 13 18 18 C 1.34670 * 106.81420 * 180.02562 * 17 16 15 19 19 N 1.34125 * 108.02349 * 359.97438 * 18 17 16 20 20 C 1.30503 * 109.25644 * 359.72857 * 19 18 17 21 21 C 1.53778 * 87.08021 * 334.56799 * 13 12 10 22 22 C 1.36333 * 106.06391 * 359.62065 * 6 5 4 23 23 C 1.51002 * 126.79284 * 180.25941 * 22 6 5 24 24 C 1.53407 * 108.24751 * 164.28084 * 23 22 6 25 25 C 1.53158 * 109.04145 * 48.47443 * 24 23 22 26 26 C 1.53128 * 109.52479 * 290.42359 * 25 24 23 27 27 N 1.35217 * 108.65949 * 0.23884 * 22 6 5 28 28 H 0.96703 * 114.00214 * 300.00214 * 1 2 3 29 29 H 1.09003 * 109.47116 * 240.00103 * 2 1 3 30 30 H 1.48504 * 110.00088 * 299.99944 * 3 2 1 31 31 H 1.48499 * 110.00201 * 61.31927 * 3 2 1 32 32 H 1.07996 * 126.81960 * 0.02562 * 5 4 2 33 33 H 0.96999 * 120.00043 * 0.02562 * 9 7 6 34 34 H 1.09002 * 113.61384 * 254.52925 * 12 10 9 35 35 H 1.09000 * 113.61838 * 25.43326 * 12 10 9 36 36 H 1.09002 * 109.46787 * 32.53339 * 15 13 12 37 37 H 1.08998 * 109.46582 * 152.52977 * 15 13 12 38 38 H 1.07999 * 126.59469 * 0.03322 * 17 16 15 39 39 H 1.08005 * 125.98409 * 180.02562 * 18 17 16 40 40 H 1.07996 * 125.65233 * 180.29143 * 20 19 18 41 41 H 1.09008 * 113.61455 * 270.88498 * 21 13 12 42 42 H 1.09005 * 113.69364 * 139.99415 * 21 13 12 43 43 H 1.09007 * 109.70719 * 283.98958 * 23 22 6 44 44 H 1.08994 * 109.70850 * 44.61067 * 23 22 6 45 45 H 1.08997 * 109.54793 * 288.60112 * 24 23 22 46 46 H 1.09000 * 109.60786 * 168.38290 * 24 23 22 47 47 H 1.08995 * 109.46162 * 170.40405 * 25 24 23 48 48 H 1.09001 * 109.46191 * 50.43834 * 25 24 23 49 49 H 1.09007 * 109.56128 * 291.17421 * 26 25 24 50 50 H 1.09004 * 109.65776 * 170.89260 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.0833 -0.4429 1.8710 6 6 3.1555 -1.3779 2.9997 7 6 4.2335 -1.4798 3.9978 8 8 4.1581 -2.2998 4.8930 9 7 5.3011 -0.6606 3.9226 10 6 6.3733 -0.7616 4.9158 11 1 6.0397 -1.2019 5.8555 12 6 7.6661 -1.3864 4.3652 13 6 8.4310 -0.3375 5.1895 14 1 8.6612 -0.6625 6.2041 15 6 9.6436 0.2497 4.4643 16 7 10.8158 -0.5935 4.7113 17 6 11.2224 -1.6604 3.9563 18 6 12.3370 -2.1456 4.5360 19 7 12.6040 -1.3950 5.6150 20 6 11.7004 -0.4596 5.7229 21 6 7.1719 0.5403 5.0947 22 6 2.0194 -2.1292 2.9405 23 6 1.6152 -3.2339 3.8874 24 6 0.1220 -3.5197 3.6826 25 6 -0.1570 -3.6699 2.1841 26 6 -0.0055 -2.3101 1.4966 27 7 1.2884 -1.7250 1.8772 28 1 -0.3934 0.4417 0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5879 2.4586 1.2242 32 1 3.8116 0.3093 1.6061 33 1 5.3592 -0.0037 3.2113 34 1 7.8327 -2.4105 4.6992 35 1 7.7848 -1.2667 3.2883 36 1 9.4429 0.2883 3.3936 37 1 9.8357 1.2567 4.8345 38 1 10.7419 -2.0401 3.0668 39 1 12.9151 -2.9904 4.1917 40 1 11.6643 0.2948 6.4949 41 1 7.1554 1.1868 4.2172 42 1 6.9385 1.0726 6.0169 43 1 2.1946 -4.1320 3.6731 44 1 1.7912 -2.9190 4.9159 45 1 -0.4657 -2.6932 4.0819 46 1 -0.1480 -4.4415 4.1979 47 1 -1.1722 -4.0391 2.0390 48 1 0.5515 -4.3764 1.7518 49 1 -0.8123 -1.6490 1.8133 50 1 -0.0434 -2.4398 0.4149 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:55 Heat of formation + Delta-G solvation = 63.636745 kcal Electronic energy + Delta-G solvation = -31607.516757 eV Core-core repulsion = 27410.514812 eV Total energy + Delta-G solvation = -4197.001946 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.88793 -42.80855 -40.92537 -39.19720 -38.17020 -36.95848 -35.30487 -33.86673 -33.44901 -31.24198 -30.34447 -29.70733 -28.62389 -26.87860 -26.70139 -24.85083 -24.72009 -23.11080 -22.16381 -21.79733 -21.71682 -21.19987 -20.71572 -19.67393 -18.92410 -18.42020 -17.41039 -17.18138 -17.03896 -16.72570 -16.34844 -16.04084 -15.80469 -15.69082 -15.45525 -15.31358 -15.19725 -15.14769 -14.80673 -14.72294 -14.60491 -14.36829 -14.17470 -14.08732 -13.94727 -13.68431 -13.50640 -13.31334 -12.94127 -12.79301 -12.46847 -12.35033 -12.21026 -12.10992 -12.03753 -11.94944 -11.83529 -11.54942 -11.00527 -10.77633 -10.69510 -10.41729 -9.97085 -9.59523 -9.33825 -9.04466 -5.09745 0.80788 0.94112 1.21966 1.36482 1.53785 1.67879 1.86507 1.93626 2.39590 2.43255 2.64363 3.03566 3.22934 3.34128 3.37947 3.46543 3.56687 3.57790 3.67549 3.71198 3.72827 3.89995 3.92488 3.99754 4.07079 4.13993 4.16678 4.22845 4.28977 4.33350 4.36988 4.49887 4.50175 4.60243 4.60770 4.63526 4.67247 4.70405 4.74765 4.82944 4.84864 4.90590 4.91966 4.99269 5.09986 5.12038 5.21423 5.40824 5.60149 5.71315 5.92182 5.98090 6.16760 6.18271 6.33170 6.68928 7.27499 7.46779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.051 4.051 3 Si 0.711 3.289 4 C -0.012 4.012 5 C -0.162 4.162 6 C -0.235 4.235 7 C 0.595 3.405 8 O -0.548 6.548 9 N -0.718 5.718 10 C 0.129 3.871 11 H 0.116 0.884 12 C -0.146 4.146 13 C -0.126 4.126 14 H 0.102 0.898 15 C 0.116 3.884 16 N -0.457 5.457 17 C -0.053 4.053 18 C -0.032 4.032 19 N -0.496 5.496 20 C 0.179 3.821 21 C -0.137 4.137 22 C 0.121 3.879 23 C -0.056 4.056 24 C -0.129 4.129 25 C -0.139 4.139 26 C 0.107 3.893 27 N -0.428 5.428 28 H 0.376 0.624 29 H 0.121 0.879 30 H -0.255 1.255 31 H -0.257 1.257 32 H 0.152 0.848 33 H 0.401 0.599 34 H 0.074 0.926 35 H 0.087 0.913 36 H 0.094 0.906 37 H 0.097 0.903 38 H 0.172 0.828 39 H 0.168 0.832 40 H 0.203 0.797 41 H 0.091 0.909 42 H 0.081 0.919 43 H 0.089 0.911 44 H 0.100 0.900 45 H 0.068 0.932 46 H 0.080 0.920 47 H 0.089 0.911 48 H 0.075 0.925 49 H 0.082 0.918 50 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.341 3.442 -3.591 5.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.161 4.161 3 Si 0.609 3.391 4 C -0.120 4.120 5 C -0.187 4.187 6 C -0.245 4.245 7 C 0.385 3.615 8 O -0.427 6.427 9 N -0.369 5.369 10 C 0.023 3.977 11 H 0.134 0.866 12 C -0.185 4.185 13 C -0.146 4.146 14 H 0.120 0.880 15 C -0.006 4.006 16 N -0.140 5.140 17 C -0.186 4.186 18 C -0.179 4.179 19 N -0.214 5.214 20 C -0.103 4.103 21 C -0.176 4.176 22 C 0.003 3.997 23 C -0.094 4.094 24 C -0.167 4.167 25 C -0.177 4.177 26 C -0.013 4.013 27 N -0.104 5.104 28 H 0.224 0.776 29 H 0.138 0.862 30 H -0.179 1.179 31 H -0.181 1.181 32 H 0.170 0.830 33 H 0.235 0.765 34 H 0.093 0.907 35 H 0.106 0.894 36 H 0.112 0.888 37 H 0.115 0.885 38 H 0.189 0.811 39 H 0.185 0.815 40 H 0.219 0.781 41 H 0.110 0.890 42 H 0.100 0.900 43 H 0.107 0.893 44 H 0.118 0.882 45 H 0.086 0.914 46 H 0.099 0.901 47 H 0.107 0.893 48 H 0.094 0.906 49 H 0.100 0.900 50 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -3.332 3.234 -3.139 5.605 hybrid contribution -1.740 0.214 -0.539 1.834 sum -5.072 3.448 -3.678 7.152 Atomic orbital electron populations 1.86588 1.17883 1.79794 1.49677 1.24829 0.83612 1.11106 0.96511 0.94628 0.91261 0.72577 0.80617 1.20676 0.96261 0.95701 0.99390 1.21620 0.97899 1.02484 0.96660 1.19825 0.98075 1.04841 1.01752 1.17352 0.80692 0.79977 0.83472 1.90773 1.79119 1.36994 1.35820 1.45698 1.20868 1.38925 1.31372 1.22378 0.85121 0.96619 0.93552 0.86567 1.23562 0.95289 0.99455 1.00154 1.22793 0.92866 0.98114 1.00830 0.88017 1.21923 0.82913 0.93886 1.01912 1.45576 1.21634 1.24488 1.22313 1.22725 1.00836 0.93750 1.01287 1.22344 0.97929 1.02549 0.95116 1.70311 1.25537 1.06133 1.19411 1.25025 0.88854 1.01719 0.94721 1.23369 0.94046 0.96656 1.03493 1.20404 0.91269 0.97745 0.90240 1.20525 0.95370 0.95139 0.98331 1.21727 0.96225 1.03088 0.95631 1.21942 1.03741 0.95834 0.96185 1.22117 0.82614 0.95036 1.01540 1.43866 1.17590 1.27282 1.21668 0.77594 0.86160 1.17932 1.18071 0.83026 0.76471 0.90724 0.89446 0.88799 0.88513 0.81102 0.81466 0.78073 0.89018 0.90031 0.89298 0.88176 0.91355 0.90133 0.89294 0.90623 0.89962 0.88519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.48 10.68 -35.23 -0.38 0.11 16 2 C -0.05 0.09 2.99 36.00 0.11 0.20 16 3 Si 0.71 -1.82 31.10 -169.99 -5.29 -7.11 16 4 C -0.01 0.00 6.15 -81.87 -0.50 -0.50 16 5 C -0.16 0.12 9.08 -37.47 -0.34 -0.22 16 6 C -0.24 -0.41 6.28 -103.48 -0.65 -1.06 16 7 C 0.60 1.52 7.81 -12.59 -0.10 1.42 16 8 O -0.55 -3.23 14.93 5.25 0.08 -3.15 16 9 N -0.72 0.67 5.35 -54.14 -0.29 0.38 16 10 C 0.13 -0.18 4.24 -67.12 -0.28 -0.46 16 11 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 12 C -0.15 0.30 7.43 -25.92 -0.19 0.11 16 13 C -0.13 0.42 3.96 -89.81 -0.36 0.07 16 14 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 15 C 0.12 -0.43 5.99 -4.04 -0.02 -0.46 16 16 N -0.46 0.16 2.75 -118.57 -0.33 -0.16 16 17 C -0.05 -0.03 11.58 -16.56 -0.19 -0.22 16 18 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 19 N -0.50 -2.32 11.25 -14.66 -0.16 -2.49 16 20 C 0.18 0.26 12.56 -90.37 -1.14 -0.88 16 21 C -0.14 0.56 7.39 -25.92 -0.19 0.37 16 22 C 0.12 0.21 6.57 -81.64 -0.54 -0.33 16 23 C -0.06 -0.05 5.33 -27.52 -0.15 -0.20 16 24 C -0.13 0.16 5.98 -26.44 -0.16 0.00 16 25 C -0.14 0.28 5.92 -26.58 -0.16 0.13 16 26 C 0.11 -0.16 5.32 -3.69 -0.02 -0.18 16 27 N -0.43 -0.14 3.11 -107.37 -0.33 -0.48 16 28 H 0.38 -1.15 8.63 45.56 0.39 -0.76 16 29 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 30 H -0.25 -0.17 7.11 56.52 0.40 0.24 16 31 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 32 H 0.15 -0.63 6.51 -52.49 -0.34 -0.98 16 33 H 0.40 -1.44 7.85 -40.82 -0.32 -1.76 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 36 H 0.09 -0.45 7.85 -51.93 -0.41 -0.85 16 37 H 0.10 -0.49 8.14 -51.93 -0.42 -0.91 16 38 H 0.17 -0.33 8.06 -52.49 -0.42 -0.75 16 39 H 0.17 0.20 8.06 -52.48 -0.42 -0.22 16 40 H 0.20 -0.36 8.06 -52.49 -0.42 -0.78 16 41 H 0.09 -0.52 8.08 -51.92 -0.42 -0.94 16 42 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 43 H 0.09 0.11 8.14 -51.93 -0.42 -0.31 16 44 H 0.10 0.22 7.39 -51.93 -0.38 -0.17 16 45 H 0.07 -0.08 8.12 -51.93 -0.42 -0.50 16 46 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 48 H 0.08 -0.10 8.11 -51.93 -0.42 -0.53 16 49 H 0.08 -0.19 7.94 -51.93 -0.41 -0.60 16 50 H 0.10 -0.13 7.68 -51.93 -0.40 -0.53 16 LS Contribution 402.52 15.07 6.07 6.07 Total: 0.00 -10.58 402.52 -13.49 -24.08 By element: Atomic # 1 Polarization: -6.96 SS G_CDS: -7.77 Total: -14.73 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: -5.09 Total: -2.52 kcal Atomic # 7 Polarization: -1.63 SS G_CDS: -1.11 Total: -2.75 kcal Atomic # 8 Polarization: -2.74 SS G_CDS: -0.30 Total: -3.04 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.29 Total: -7.11 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -10.58 -13.49 -24.08 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.714 kcal (2) G-P(sol) polarization free energy of solvation -10.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.131 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.077 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.637 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds