Wall clock time and date at job start Tue Mar 9 2021 13:07:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.47422 * 2 1 4 4 C 1.50707 * 109.46672 * 240.00424 * 2 1 3 5 5 C 1.38714 * 120.02488 * 284.99597 * 4 2 1 6 6 O 1.35902 * 120.05891 * 359.97438 * 5 4 2 7 7 C 1.42895 * 117.00017 * 179.97438 * 6 5 4 8 8 C 1.50701 * 109.46838 * 179.97438 * 7 6 5 9 9 O 1.21280 * 120.00269 * 0.02562 * 8 7 6 10 10 N 1.34781 * 119.99932 * 179.97438 * 8 7 6 11 11 C 1.46500 * 119.99985 * 179.97438 * 10 8 7 12 12 H 1.09002 * 112.85221 * 334.67013 * 11 10 8 13 13 C 1.53785 * 113.68813 * 105.94035 * 11 10 8 14 14 C 1.53779 * 87.08093 * 139.99098 * 13 11 10 15 15 H 1.09005 * 113.69135 * 89.12376 * 14 13 11 16 16 C 1.52999 * 113.61451 * 220.01770 * 14 13 11 17 17 N 1.46504 * 109.47047 * 272.49902 * 16 14 13 18 18 C 1.36877 * 126.39660 * 89.99677 * 17 16 14 19 19 C 1.34667 * 106.81652 * 180.02562 * 18 17 16 20 20 N 1.34125 * 108.02343 * 0.02562 * 19 18 17 21 21 C 1.30500 * 109.25261 * 359.72607 * 20 19 18 22 22 C 1.53781 * 113.61339 * 203.47543 * 11 10 8 23 23 C 1.38751 * 119.88467 * 180.25234 * 5 4 2 24 24 C 1.38125 * 119.94567 * 359.43164 * 23 5 4 25 25 C 1.38284 * 120.05463 * 0.59368 * 24 23 5 26 26 C 1.38165 * 120.02947 * 104.97712 * 4 2 1 27 27 H 0.96699 * 114.00566 * 59.99485 * 1 2 3 28 28 H 1.08999 * 109.47378 * 120.00905 * 2 1 3 29 29 H 1.48504 * 110.00052 * 60.00185 * 3 2 1 30 30 H 1.48492 * 110.00235 * 181.32329 * 3 2 1 31 31 H 1.08997 * 109.47351 * 60.00259 * 7 6 5 32 32 H 1.08994 * 109.47217 * 299.99197 * 7 6 5 33 33 H 0.96998 * 119.99866 * 0.02562 * 10 8 7 34 34 H 1.09003 * 113.60734 * 254.54218 * 13 11 10 35 35 H 1.08996 * 113.61146 * 25.43716 * 13 11 10 36 36 H 1.09003 * 109.47100 * 32.49589 * 16 14 13 37 37 H 1.08995 * 109.47213 * 152.50009 * 16 14 13 38 38 H 1.08003 * 126.59665 * 359.97073 * 18 17 16 39 39 H 1.08005 * 125.99197 * 180.02562 * 19 18 17 40 40 H 1.08007 * 125.65108 * 180.29310 * 21 20 19 41 41 H 1.09005 * 113.61302 * 334.48230 * 22 11 10 42 42 H 1.08996 * 113.61527 * 105.30394 * 22 11 10 43 43 H 1.08002 * 120.02769 * 179.70199 * 23 5 4 44 44 H 1.07994 * 119.97154 * 180.29521 * 24 23 5 45 45 H 1.07999 * 119.94409 * 179.69991 * 25 24 23 46 46 H 1.07999 * 119.96827 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.8696 -2.0940 -1.3071 6 8 1.3568 -2.8108 -0.2726 7 6 1.3241 -4.2316 -0.4210 8 6 0.7281 -4.8523 0.8162 9 8 0.3664 -4.1472 1.7344 10 7 0.5959 -6.1908 0.9019 11 6 0.0171 -6.7942 2.1049 12 1 0.1371 -6.1708 2.9909 13 6 -1.4168 -7.3137 1.9067 14 6 -1.0139 -8.5223 2.7680 15 1 -1.1754 -8.3727 3.8356 16 6 -1.5792 -9.8510 2.2621 17 7 -2.9104 -10.0652 2.8350 18 6 -4.1018 -9.6638 2.2937 19 6 -5.0690 -10.0618 3.1420 20 7 -4.4841 -10.6885 4.1736 21 6 -3.1916 -10.6991 3.9938 22 6 0.4338 -8.2586 2.3211 23 6 2.3376 -2.7454 -2.4393 24 6 2.8528 -2.0143 -3.4919 25 6 2.9136 -0.6351 -3.4130 26 6 2.4531 0.0160 -2.2837 27 1 -0.3934 0.4417 -0.7650 28 1 1.7924 -0.5140 0.8899 29 1 1.5616 2.4679 1.2085 30 1 3.5346 1.7702 -0.0322 31 1 2.3381 -4.6057 -0.5621 32 1 0.7166 -4.4926 -1.2874 33 1 0.8848 -6.7547 0.1675 34 1 -2.1771 -6.6831 2.3676 35 1 -1.6488 -7.5716 0.8735 36 1 -1.6516 -9.8246 1.1748 37 1 -0.9191 -10.6646 2.5626 38 1 -4.2397 -9.1298 1.3651 39 1 -6.1297 -9.9040 3.0142 40 1 -2.4666 -11.1400 4.6620 41 1 0.7076 -8.7751 1.4010 42 1 1.1683 -8.3909 3.1154 43 1 2.2951 -3.8229 -2.4993 44 1 3.2128 -2.5206 -4.3753 45 1 3.3213 -0.0655 -4.2350 46 1 2.5014 1.0933 -2.2245 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14468608_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:58 Heat of formation + Delta-G solvation = 22.380834 kcal Electronic energy + Delta-G solvation = -28770.024885 eV Core-core repulsion = 24629.052905 eV Total energy + Delta-G solvation = -4140.971979 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.95608 -41.69314 -41.02024 -39.65799 -38.42883 -37.49190 -35.49940 -34.10893 -32.72512 -31.28822 -30.44782 -29.77708 -28.37131 -26.78147 -26.68768 -24.48080 -23.25067 -22.61521 -22.27817 -21.87911 -21.63469 -20.70058 -19.50189 -18.56551 -18.21646 -18.02320 -17.52360 -17.31736 -16.85986 -16.59387 -16.44250 -16.10599 -15.80735 -15.57198 -15.38827 -15.15932 -15.00793 -14.93240 -14.84830 -14.30796 -14.21922 -14.16438 -13.81656 -13.57474 -13.49091 -13.46596 -13.02499 -12.90433 -12.40732 -12.33693 -12.18607 -12.09365 -12.01334 -11.77509 -11.49749 -11.05578 -10.92447 -10.50595 -10.39656 -10.19080 -9.95871 -9.45419 -9.21905 -5.07051 0.24503 0.41955 1.14277 1.27183 1.36158 1.47911 1.60580 1.92973 1.94038 2.22450 2.58487 2.71576 3.33012 3.43204 3.48509 3.54517 3.66175 3.71258 3.75287 3.88507 3.88704 3.96326 4.01237 4.03443 4.12364 4.14874 4.19092 4.31411 4.36291 4.40278 4.52691 4.58142 4.64591 4.66368 4.69907 4.75394 4.79194 4.90963 4.97931 4.99407 5.11822 5.28731 5.34791 5.38703 5.46806 5.53737 5.77237 5.82055 6.26321 6.31985 6.44025 6.79898 7.08420 7.15729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.074 4.074 3 Si 0.795 3.205 4 C -0.172 4.172 5 C 0.124 3.876 6 O -0.317 6.317 7 C 0.037 3.963 8 C 0.510 3.490 9 O -0.575 6.575 10 N -0.696 5.696 11 C 0.113 3.887 12 H 0.082 0.918 13 C -0.144 4.144 14 C -0.118 4.118 15 H 0.085 0.915 16 C 0.115 3.885 17 N -0.453 5.453 18 C -0.045 4.045 19 C -0.069 4.069 20 N -0.547 5.547 21 C 0.173 3.827 22 C -0.112 4.112 23 C -0.213 4.213 24 C -0.076 4.076 25 C -0.154 4.154 26 C -0.079 4.079 27 H 0.391 0.609 28 H 0.078 0.922 29 H -0.305 1.305 30 H -0.281 1.281 31 H 0.123 0.877 32 H 0.123 0.877 33 H 0.423 0.577 34 H 0.046 0.954 35 H 0.107 0.893 36 H 0.115 0.885 37 H 0.120 0.880 38 H 0.197 0.803 39 H 0.170 0.830 40 H 0.228 0.772 41 H 0.124 0.876 42 H 0.086 0.914 43 H 0.154 0.846 44 H 0.154 0.846 45 H 0.155 0.845 46 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.674 -3.292 -11.847 13.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.182 4.182 3 Si 0.700 3.300 4 C -0.173 4.173 5 C 0.079 3.921 6 O -0.230 6.230 7 C -0.041 4.041 8 C 0.297 3.703 9 O -0.454 6.454 10 N -0.350 5.350 11 C 0.008 3.992 12 H 0.100 0.900 13 C -0.183 4.183 14 C -0.138 4.138 15 H 0.104 0.896 16 C -0.006 4.006 17 N -0.135 5.135 18 C -0.179 4.179 19 C -0.216 4.216 20 N -0.266 5.266 21 C -0.110 4.110 22 C -0.151 4.151 23 C -0.231 4.231 24 C -0.094 4.094 25 C -0.172 4.172 26 C -0.096 4.096 27 H 0.240 0.760 28 H 0.095 0.905 29 H -0.233 1.233 30 H -0.208 1.208 31 H 0.140 0.860 32 H 0.141 0.859 33 H 0.262 0.738 34 H 0.065 0.935 35 H 0.126 0.874 36 H 0.134 0.866 37 H 0.139 0.861 38 H 0.214 0.786 39 H 0.187 0.813 40 H 0.244 0.756 41 H 0.142 0.858 42 H 0.105 0.895 43 H 0.172 0.828 44 H 0.172 0.828 45 H 0.172 0.828 46 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 6.641 -2.785 -9.443 11.875 hybrid contribution 0.180 -0.499 -0.114 0.543 sum 6.821 -3.283 -9.557 12.192 Atomic orbital electron populations 1.86542 1.17763 1.82185 1.50022 1.25190 0.85105 1.11222 0.96695 0.94035 0.77585 0.73788 0.84584 1.19851 1.07042 0.91596 0.98830 1.19120 0.94335 0.91200 0.87447 1.86193 1.78130 1.18808 1.39854 1.22721 1.04431 0.79910 0.97053 1.20649 0.78092 0.83372 0.88229 1.90783 1.50360 1.62719 1.41518 1.45632 1.63366 1.05271 1.20726 1.22479 0.94274 0.94311 0.88107 0.89956 1.23579 0.96338 0.96897 1.01498 1.22650 0.97193 0.93792 1.00122 0.89642 1.22196 0.79680 0.98273 1.00433 1.45758 1.07980 1.41483 1.18290 1.23073 0.84712 1.07140 1.02944 1.22622 1.00708 1.04734 0.93514 1.70235 1.07038 1.22143 1.27175 1.25520 0.94117 1.01140 0.90217 1.23297 0.95318 0.92339 1.04107 1.21588 1.05693 1.01809 0.94042 1.21419 0.95483 0.94325 0.98139 1.21459 1.01834 0.95068 0.98804 1.21113 0.96200 1.00159 0.92151 0.76005 0.90455 1.23314 1.20763 0.85954 0.85920 0.73774 0.93547 0.87423 0.86650 0.86145 0.78622 0.81283 0.75574 0.85774 0.89547 0.82804 0.82793 0.82773 0.82610 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.83 12.88 -148.98 -1.92 -6.75 16 2 C -0.07 -0.52 2.38 71.24 0.17 -0.35 16 3 Si 0.80 1.25 29.92 68.60 2.05 3.31 16 4 C -0.17 -0.71 5.27 -19.77 -0.10 -0.82 16 5 C 0.12 0.57 6.66 22.51 0.15 0.72 16 6 O -0.32 -2.66 9.00 -73.41 -0.66 -3.32 16 7 C 0.04 -0.07 5.22 71.24 0.37 0.30 16 8 C 0.51 1.86 7.91 87.66 0.69 2.55 16 9 O -0.58 -9.78 16.12 16.01 0.26 -9.52 16 10 N -0.70 3.92 5.36 -440.02 -2.36 1.56 16 11 C 0.11 -0.43 4.22 45.52 0.19 -0.24 16 12 H 0.08 0.32 7.50 -2.39 -0.02 0.30 16 13 C -0.14 0.73 7.43 31.12 0.23 0.96 16 14 C -0.12 0.99 3.96 -10.27 -0.04 0.95 16 15 H 0.09 -0.36 8.14 -2.38 -0.02 -0.38 16 16 C 0.12 -1.21 5.99 86.38 0.52 -0.69 16 17 N -0.45 0.87 2.75 -529.06 -1.46 -0.58 16 18 C -0.04 -0.04 11.58 83.09 0.96 0.93 16 19 C -0.07 -0.49 11.87 83.52 0.99 0.50 16 20 N -0.55 -5.83 11.25 -200.31 -2.25 -8.09 16 21 C 0.17 0.48 12.56 180.26 2.26 2.74 16 22 C -0.11 1.29 7.39 31.12 0.23 1.52 16 23 C -0.21 0.49 9.04 22.37 0.20 0.69 16 24 C -0.08 0.35 10.04 22.25 0.22 0.57 16 25 C -0.15 0.65 10.04 22.28 0.22 0.87 16 26 C -0.08 0.14 8.66 22.25 0.19 0.33 16 27 H 0.39 -0.55 8.70 -74.06 -0.64 -1.20 16 28 H 0.08 1.01 7.83 -2.39 -0.02 1.00 16 29 H -0.30 -2.96 7.11 99.48 0.71 -2.26 16 30 H -0.28 -1.49 7.11 99.48 0.71 -0.78 16 31 H 0.12 -1.05 7.65 -2.39 -0.02 -1.07 16 32 H 0.12 -1.03 7.68 -2.39 -0.02 -1.05 16 33 H 0.42 -6.14 8.71 -92.71 -0.81 -6.95 16 34 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 35 H 0.11 -0.97 7.90 -2.39 -0.02 -0.99 16 36 H 0.12 -1.63 7.84 -2.39 -0.02 -1.65 16 37 H 0.12 -1.73 8.14 -2.39 -0.02 -1.74 16 38 H 0.20 -1.05 8.06 -2.91 -0.02 -1.07 16 39 H 0.17 0.77 8.06 -2.91 -0.02 0.75 16 40 H 0.23 -0.98 8.06 -2.91 -0.02 -1.01 16 41 H 0.12 -2.15 8.07 -2.38 -0.02 -2.17 16 42 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 43 H 0.15 -1.33 6.30 -2.91 -0.02 -1.35 16 44 H 0.15 -1.54 8.06 -2.91 -0.02 -1.56 16 45 H 0.15 -1.44 8.06 -2.91 -0.02 -1.46 16 46 H 0.16 -1.11 5.13 -2.91 -0.01 -1.13 16 Total: 0.00 -39.27 387.88 0.73 -38.54 By element: Atomic # 1 Polarization: -26.28 SS G_CDS: -0.40 Total: -26.67 kcal Atomic # 6 Polarization: 4.06 SS G_CDS: 7.47 Total: 11.53 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: -6.07 Total: -7.11 kcal Atomic # 8 Polarization: -17.28 SS G_CDS: -2.32 Total: -19.60 kcal Atomic # 14 Polarization: 1.25 SS G_CDS: 2.05 Total: 3.31 kcal Total: -39.27 0.73 -38.54 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.917 kcal (2) G-P(sol) polarization free energy of solvation -39.271 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.735 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.536 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.381 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds