Wall clock time and date at job start Tue Mar 9 2021 13:08:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86300 * 109.47554 * 2 1 4 4 C 1.50700 * 109.47079 * 240.00057 * 2 1 3 5 5 C 1.38271 * 119.94201 * 300.00083 * 4 2 1 6 6 C 1.38142 * 120.05516 * 179.97438 * 5 4 2 7 7 C 1.38739 * 119.94348 * 359.97438 * 6 5 4 8 8 O 1.35898 * 120.05574 * 180.02562 * 7 6 5 9 9 C 1.42895 * 117.00295 * 180.02562 * 8 7 6 10 10 C 1.52997 * 109.47493 * 180.02562 * 9 8 7 11 11 C 1.50697 * 109.47264 * 180.02562 * 10 9 8 12 12 O 1.21278 * 120.00238 * 0.02562 * 11 10 9 13 13 N 1.34780 * 120.00263 * 179.97438 * 11 10 9 14 14 C 1.46500 * 120.00256 * 180.02562 * 13 11 10 15 15 H 1.08998 * 112.90537 * 336.25354 * 14 13 11 16 16 C 1.53780 * 113.61576 * 107.50144 * 14 13 11 17 17 C 1.53781 * 87.08076 * 139.97790 * 16 14 13 18 18 H 1.09003 * 113.68495 * 89.13014 * 17 16 14 19 19 C 1.52999 * 113.61508 * 220.01902 * 17 16 14 20 20 N 1.46507 * 109.46750 * 272.49997 * 19 17 16 21 21 C 1.36878 * 126.39829 * 90.00767 * 20 19 17 22 22 C 1.34666 * 106.81597 * 180.23772 * 21 20 19 23 23 N 1.34129 * 108.02165 * 359.60606 * 22 21 20 24 24 C 1.30498 * 109.25671 * 0.40230 * 23 22 21 25 25 C 1.53781 * 113.61268 * 205.00129 * 14 13 11 26 26 C 1.38724 * 119.88764 * 0.28084 * 7 6 5 27 27 C 1.38146 * 119.94599 * 359.46617 * 26 7 6 28 28 H 0.96710 * 113.99602 * 299.99915 * 1 2 3 29 29 H 1.09001 * 109.47057 * 120.00619 * 2 1 3 30 30 H 1.48499 * 109.99928 * 300.00325 * 3 2 1 31 31 H 1.48499 * 109.99646 * 61.32086 * 3 2 1 32 32 H 1.08003 * 119.97225 * 0.02562 * 5 4 2 33 33 H 1.08000 * 120.02878 * 180.02562 * 6 5 4 34 34 H 1.09004 * 109.47033 * 60.00400 * 9 8 7 35 35 H 1.08996 * 109.47196 * 300.00331 * 9 8 7 36 36 H 1.08998 * 109.47487 * 59.99869 * 10 9 8 37 37 H 1.09007 * 109.47317 * 299.99846 * 10 9 8 38 38 H 0.97001 * 119.99625 * 359.97438 * 13 11 10 39 39 H 1.08999 * 113.61480 * 25.43304 * 16 14 13 40 40 H 1.08998 * 113.61407 * 254.53425 * 16 14 13 41 41 H 1.09001 * 109.46790 * 152.50433 * 19 17 16 42 42 H 1.08994 * 109.47333 * 32.49938 * 19 17 16 43 43 H 1.08002 * 126.58785 * 359.96564 * 21 20 19 44 44 H 1.08003 * 125.98708 * 179.75770 * 22 21 20 45 45 H 1.07999 * 125.65025 * 179.72938 * 24 23 22 46 46 H 1.08997 * 113.61616 * 105.47175 * 25 14 13 47 47 H 1.08997 * 113.61453 * 334.56684 * 25 14 13 48 48 H 1.08007 * 120.03112 * 179.72096 * 26 7 6 49 49 H 1.07997 * 119.97557 * 180.23356 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0342 -1.4481 6 6 2.0552 -2.6875 -2.5755 7 6 2.8520 -2.0141 -3.4901 8 8 3.3041 -2.6544 -4.6002 9 6 4.1202 -1.8992 -5.4977 10 6 4.5298 -2.7807 -6.6792 11 6 5.3909 -1.9843 -7.6254 12 8 5.6518 -0.8259 -7.3788 13 7 5.8720 -2.5597 -8.7452 14 6 6.7096 -1.7857 -9.6647 15 1 6.5467 -0.7110 -9.5844 16 6 8.1936 -2.1878 -9.6330 17 6 8.1906 -2.0203 -11.1616 18 1 8.4326 -1.0101 -11.4919 19 6 8.9940 -3.0945 -11.8975 20 7 10.3944 -2.6753 -11.9955 21 6 11.3866 -2.9392 -11.0902 22 6 12.5097 -2.3683 -11.5657 23 7 12.2135 -1.7796 -12.7339 24 6 10.9475 -1.9566 -12.9962 25 6 6.6805 -2.3068 -11.1113 26 6 3.1909 -0.6875 -3.2667 27 6 2.7253 -0.0371 -2.1404 28 1 -0.3933 0.4417 0.7652 29 1 1.7923 -0.5139 0.8899 30 1 1.5615 2.4679 -1.2084 31 1 1.5880 2.4584 1.2243 32 1 0.9751 -2.5576 -0.7365 33 1 1.7931 -3.7214 -2.7453 34 1 5.0123 -1.5543 -4.9749 35 1 3.5585 -1.0397 -5.8637 36 1 3.6376 -3.1253 -7.2020 37 1 5.0914 -3.6404 -6.3136 38 1 5.6643 -3.4866 -8.9419 39 1 8.3610 -3.2142 -9.3066 40 1 8.8297 -1.4692 -9.1161 41 1 8.5850 -3.2322 -12.8984 42 1 8.9336 -4.0338 -11.3478 43 1 11.2866 -3.4943 -10.1692 44 1 13.4797 -2.3841 -11.0909 45 1 10.4280 -1.5888 -13.8687 46 1 6.0952 -1.6843 -11.7880 47 1 6.4342 -3.3658 -11.1890 48 1 3.8148 -0.1624 -3.9749 49 1 2.9857 0.9967 -1.9679 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:04 Heat of formation + Delta-G solvation = 14.989037 kcal Electronic energy + Delta-G solvation = -29670.962265 eV Core-core repulsion = 25374.132134 eV Total energy + Delta-G solvation = -4296.830131 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.96219 -41.51793 -41.10278 -39.79851 -38.99787 -37.32373 -35.53773 -34.18477 -33.28887 -31.97543 -31.48943 -30.40095 -28.95803 -27.05247 -26.67270 -25.72416 -24.20791 -23.23080 -22.24529 -22.04474 -21.79604 -21.63464 -20.84611 -19.46761 -18.58366 -18.50774 -17.99435 -17.53026 -17.50269 -17.07322 -16.73204 -16.58097 -16.14075 -15.97534 -15.67092 -15.48245 -15.32841 -14.92216 -14.81403 -14.62158 -14.57743 -14.35669 -14.16541 -14.05469 -13.89390 -13.85798 -13.69094 -13.63293 -13.16024 -12.95608 -12.82616 -12.50878 -12.36159 -12.20532 -11.96226 -11.74022 -11.71591 -11.62827 -11.06620 -10.84053 -10.51251 -10.47380 -10.25421 -9.95141 -9.41099 -9.11752 -4.95269 0.36501 0.39816 1.14029 1.30451 1.41119 1.60346 1.62331 1.79606 1.97252 2.33038 2.40891 2.69511 3.07220 3.17393 3.36773 3.41038 3.42388 3.48417 3.75775 3.77050 3.79268 3.83830 3.84695 3.86017 3.91791 3.98955 4.02622 4.11253 4.24497 4.31895 4.33061 4.37098 4.44722 4.45178 4.49493 4.54289 4.57181 4.63278 4.67316 4.75377 4.77496 4.81883 4.96202 5.02563 5.25401 5.29420 5.32843 5.35684 5.58460 5.77106 5.85064 6.22924 6.25627 6.38605 6.46084 6.99206 7.20595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.070 4.070 3 Si 0.678 3.322 4 C -0.112 4.112 5 C -0.052 4.052 6 C -0.150 4.150 7 C 0.136 3.864 8 O -0.316 6.316 9 C 0.073 3.927 10 C -0.142 4.142 11 C 0.522 3.478 12 O -0.536 6.536 13 N -0.720 5.720 14 C 0.124 3.876 15 H 0.118 0.882 16 C -0.146 4.146 17 C -0.126 4.126 18 H 0.103 0.897 19 C 0.117 3.883 20 N -0.458 5.458 21 C -0.054 4.054 22 C -0.030 4.030 23 N -0.495 5.495 24 C 0.180 3.820 25 C -0.137 4.137 26 C -0.202 4.202 27 C -0.073 4.073 28 H 0.379 0.621 29 H 0.076 0.924 30 H -0.256 1.256 31 H -0.261 1.261 32 H 0.132 0.868 33 H 0.134 0.866 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.108 0.892 37 H 0.108 0.892 38 H 0.404 0.596 39 H 0.087 0.913 40 H 0.076 0.924 41 H 0.097 0.903 42 H 0.093 0.907 43 H 0.172 0.828 44 H 0.169 0.831 45 H 0.203 0.797 46 H 0.083 0.917 47 H 0.092 0.908 48 H 0.135 0.865 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.262 -4.600 0.130 4.772 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.579 3.421 4 C -0.112 4.112 5 C -0.070 4.070 6 C -0.169 4.169 7 C 0.091 3.909 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.308 3.692 12 O -0.412 6.412 13 N -0.371 5.371 14 C 0.019 3.981 15 H 0.136 0.864 16 C -0.185 4.185 17 C -0.146 4.146 18 H 0.121 0.879 19 C -0.006 4.006 20 N -0.141 5.141 21 C -0.187 4.187 22 C -0.178 4.178 23 N -0.213 5.213 24 C -0.103 4.103 25 C -0.175 4.175 26 C -0.220 4.220 27 C -0.091 4.091 28 H 0.227 0.773 29 H 0.094 0.906 30 H -0.180 1.180 31 H -0.186 1.186 32 H 0.150 0.850 33 H 0.152 0.848 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.126 0.874 37 H 0.126 0.874 38 H 0.239 0.761 39 H 0.106 0.894 40 H 0.095 0.905 41 H 0.116 0.884 42 H 0.112 0.888 43 H 0.189 0.811 44 H 0.186 0.814 45 H 0.220 0.780 46 H 0.102 0.898 47 H 0.110 0.890 48 H 0.153 0.847 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.807 -3.045 -0.799 3.250 hybrid contribution -1.702 -0.895 0.887 2.118 sum -2.509 -3.940 0.089 4.672 Atomic orbital electron populations 1.86592 1.17973 1.80109 1.49741 1.24712 0.84302 1.10699 0.98262 0.95131 0.91812 0.74859 0.80283 1.19156 1.00867 0.94654 0.96518 1.20802 0.96616 0.93554 0.96054 1.20476 1.00977 1.01058 0.94391 1.18967 0.94206 0.91033 0.86696 1.85966 1.65138 1.40412 1.31488 1.22420 0.94798 0.93838 0.89179 1.21478 1.01329 0.99923 0.95459 1.20358 0.79685 0.87439 0.81717 1.90760 1.58829 1.17303 1.74314 1.45930 1.52526 1.15721 1.22897 1.22481 0.89601 0.97940 0.88055 0.86369 1.23561 0.97006 1.02763 0.95146 1.22798 0.95214 1.00206 0.96360 0.87852 1.21908 0.77933 0.97835 1.02950 1.45570 1.09138 1.41125 1.18275 1.22720 0.88983 1.08763 0.98248 1.22355 0.98947 1.02018 0.94462 1.70319 1.12594 1.22450 1.15954 1.25041 0.90577 0.99201 0.95434 1.23367 0.95220 1.02580 0.96361 1.21231 1.05852 0.94407 1.00542 1.20735 0.96388 0.99032 0.92924 0.77323 0.90646 1.18029 1.18640 0.85025 0.84847 0.90784 0.90910 0.87425 0.87415 0.76147 0.89406 0.90526 0.88438 0.88836 0.81119 0.81406 0.78029 0.89847 0.88965 0.84722 0.85321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.86 12.74 -35.23 -0.45 -1.31 16 2 C -0.07 -0.03 2.81 36.01 0.10 0.07 16 3 Si 0.68 -0.18 29.78 -169.99 -5.06 -5.24 16 4 C -0.11 -0.21 5.42 -104.60 -0.57 -0.78 16 5 C -0.05 -0.09 9.60 -39.60 -0.38 -0.47 16 6 C -0.15 -0.27 9.99 -39.43 -0.39 -0.66 16 7 C 0.14 0.30 6.69 -39.22 -0.26 0.03 16 8 O -0.32 -0.46 10.14 -19.42 -0.20 -0.66 16 9 C 0.07 -0.01 4.03 37.16 0.15 0.14 16 10 C -0.14 0.37 6.07 -27.89 -0.17 0.20 16 11 C 0.52 -0.38 7.83 -10.99 -0.09 -0.47 16 12 O -0.54 -1.87 15.58 5.56 0.09 -1.78 16 13 N -0.72 2.43 5.35 -53.02 -0.28 2.15 16 14 C 0.12 -0.36 4.24 -67.12 -0.28 -0.65 16 15 H 0.12 -0.08 7.47 -51.93 -0.39 -0.46 16 16 C -0.15 0.48 7.43 -25.92 -0.19 0.28 16 17 C -0.13 0.53 3.96 -89.81 -0.36 0.18 16 18 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 19 C 0.12 -0.50 5.99 -4.04 -0.02 -0.53 16 20 N -0.46 0.42 2.75 -118.57 -0.33 0.09 16 21 C -0.05 -0.01 11.58 -16.56 -0.19 -0.20 16 22 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 23 N -0.50 -2.11 11.25 -14.66 -0.16 -2.27 16 24 C 0.18 0.17 12.56 -90.37 -1.14 -0.96 16 25 C -0.14 0.70 7.39 -25.92 -0.19 0.51 16 26 C -0.20 -0.33 9.04 -39.44 -0.36 -0.69 16 27 C -0.07 -0.11 8.66 -39.61 -0.34 -0.45 16 28 H 0.38 -0.91 8.74 45.56 0.40 -0.51 16 29 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H -0.26 -0.78 7.11 56.52 0.40 -0.37 16 31 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 32 H 0.13 0.08 8.06 -52.48 -0.42 -0.34 16 33 H 0.13 0.05 8.06 -52.49 -0.42 -0.37 16 34 H 0.07 0.01 7.61 -51.93 -0.40 -0.39 16 35 H 0.07 0.03 7.63 -51.93 -0.40 -0.37 16 36 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 37 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 38 H 0.40 -2.49 8.73 -40.82 -0.36 -2.85 16 39 H 0.09 -0.36 7.90 -51.93 -0.41 -0.77 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.10 -0.55 8.14 -51.93 -0.42 -0.97 16 42 H 0.09 -0.50 7.84 -51.93 -0.41 -0.91 16 43 H 0.17 -0.42 8.06 -52.49 -0.42 -0.85 16 44 H 0.17 0.12 8.06 -52.48 -0.42 -0.30 16 45 H 0.20 -0.46 8.06 -52.49 -0.42 -0.88 16 46 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 47 H 0.09 -0.61 8.08 -51.93 -0.42 -1.02 16 48 H 0.14 0.05 6.30 -52.48 -0.33 -0.28 16 49 H 0.13 -0.04 4.87 -52.49 -0.26 -0.30 16 LS Contribution 409.25 15.07 6.17 6.17 Total: 0.00 -11.51 409.25 -12.35 -23.86 By element: Atomic # 1 Polarization: -9.05 SS G_CDS: -7.22 Total: -16.27 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -4.90 Total: -4.73 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.78 Total: -0.04 kcal Atomic # 8 Polarization: -3.19 SS G_CDS: -0.56 Total: -3.75 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.06 Total: -5.24 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -11.51 -12.35 -23.86 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.848 kcal (2) G-P(sol) polarization free energy of solvation -11.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.336 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.347 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds