Wall clock time and date at job start Tue Mar 9 2021 13:08:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.47089 * 2 1 4 4 C 1.50707 * 109.47110 * 119.99652 * 2 1 3 5 5 C 1.38236 * 119.97368 * 245.00581 * 4 2 1 6 6 C 1.38291 * 120.11097 * 179.97438 * 5 4 2 7 7 C 1.38120 * 120.05352 * 0.03500 * 6 5 4 8 8 C 1.38752 * 119.94802 * 359.97438 * 7 6 5 9 9 O 1.35895 * 120.05862 * 180.02562 * 8 7 6 10 10 C 1.42906 * 116.99828 * 359.97438 * 9 8 7 11 11 C 1.53008 * 109.46868 * 179.97438 * 10 9 8 12 12 C 1.50704 * 109.46832 * 179.97438 * 11 10 9 13 13 O 1.21281 * 119.99871 * 0.02562 * 12 11 10 14 14 N 1.34774 * 119.99878 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99875 * 180.02562 * 14 12 11 16 16 H 1.08992 * 112.85087 * 23.80850 * 15 14 12 17 17 C 1.53778 * 113.61199 * 155.00606 * 15 14 12 18 18 C 1.53784 * 87.08427 * 140.06306 * 17 15 14 19 19 H 1.08997 * 113.61223 * 89.19480 * 18 17 15 20 20 C 1.52994 * 113.61638 * 220.01868 * 18 17 15 21 21 N 1.46499 * 109.47010 * 184.99876 * 20 18 17 22 22 C 1.36887 * 126.39910 * 90.00068 * 21 20 18 23 23 C 1.34672 * 106.81700 * 179.97438 * 22 21 20 24 24 N 1.34127 * 108.01948 * 0.22851 * 23 22 21 25 25 C 1.30502 * 109.25683 * 359.61488 * 24 23 22 26 26 C 1.53781 * 87.07788 * 334.56756 * 18 17 15 27 27 C 1.38165 * 119.96664 * 65.29865 * 4 2 1 28 28 H 0.96697 * 114.00102 * 300.00537 * 1 2 3 29 29 H 1.08996 * 109.47248 * 239.99824 * 2 1 3 30 30 H 1.48504 * 109.99969 * 178.67358 * 3 2 1 31 31 H 1.48497 * 110.00258 * 299.99666 * 3 2 1 32 32 H 1.07996 * 119.94812 * 359.97438 * 5 4 2 33 33 H 1.08000 * 119.97143 * 180.02562 * 6 5 4 34 34 H 1.08001 * 120.02504 * 179.97438 * 7 6 5 35 35 H 1.09003 * 109.46721 * 60.00632 * 10 9 8 36 36 H 1.08994 * 109.47291 * 300.00280 * 10 9 8 37 37 H 1.09003 * 109.46895 * 60.00786 * 11 10 9 38 38 H 1.08994 * 109.47432 * 300.00241 * 11 10 9 39 39 H 0.96997 * 120.00030 * 0.02562 * 14 12 11 40 40 H 1.09001 * 113.61843 * 25.51623 * 17 15 14 41 41 H 1.09002 * 113.68865 * 254.61924 * 17 15 14 42 42 H 1.08996 * 109.47208 * 64.99570 * 20 18 17 43 43 H 1.08994 * 109.46968 * 304.99696 * 20 18 17 44 44 H 1.07997 * 126.58796 * 359.97438 * 22 21 20 45 45 H 1.08002 * 125.98510 * 179.97438 * 23 22 21 46 46 H 1.08003 * 125.64479 * 180.14464 * 25 24 23 47 47 H 1.09004 * 113.61800 * 139.98331 * 26 18 17 48 48 H 1.09004 * 113.61179 * 270.88093 * 26 18 17 49 49 H 1.07998 * 120.03374 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6386 -0.0116 2.1910 6 6 3.1004 -0.6605 3.3216 7 6 2.8565 -2.0091 3.4933 8 6 2.1470 -2.7128 2.5306 9 8 1.9053 -4.0396 2.6975 10 6 2.4116 -4.6465 3.8881 11 6 2.0434 -6.1316 3.8998 12 6 2.5779 -6.7717 5.1551 13 8 3.1923 -6.1057 5.9611 14 7 2.3721 -8.0842 5.3824 15 6 2.8912 -8.7063 6.6029 16 1 3.0448 -7.9906 7.4104 17 6 2.1146 -9.9623 7.0322 18 6 3.4740 -10.5829 7.3953 19 1 3.7863 -10.3813 8.4199 20 6 3.5937 -12.0606 7.0174 21 7 4.8692 -12.5883 7.5079 22 6 5.0946 -13.1629 8.7298 23 6 6.3967 -13.5049 8.7653 24 7 6.9523 -13.1445 7.5989 25 6 6.0422 -12.5994 6.8389 26 6 4.0965 -9.6302 6.3610 27 6 1.6898 -2.0608 1.3948 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5138 -0.8899 30 1 3.5346 1.7703 0.0323 31 1 1.5615 2.4679 -1.2085 32 1 2.8308 1.0428 2.0584 33 1 3.6523 -0.1123 4.0707 34 1 3.2177 -2.5155 4.3761 35 1 1.9751 -4.1575 4.7590 36 1 3.4960 -4.5404 3.9172 37 1 2.4796 -6.6209 3.0289 38 1 0.9590 -6.2373 3.8709 39 1 1.8804 -8.6167 4.7378 40 1 1.6104 -10.4669 6.2081 41 1 1.4642 -9.8023 7.8921 42 1 3.5509 -12.1630 5.9331 43 1 2.7725 -12.6183 7.4676 44 1 4.3679 -13.3129 9.5144 45 1 6.9052 -13.9819 9.5901 46 1 6.2017 -12.2167 5.8416 47 1 5.0466 -9.2008 6.6790 48 1 4.1342 -10.0441 5.3532 49 1 1.1409 -2.6072 0.6421 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:08 Heat of formation + Delta-G solvation = 13.143238 kcal Electronic energy + Delta-G solvation = -29715.407204 eV Core-core repulsion = 25418.497034 eV Total energy + Delta-G solvation = -4296.910170 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.97198 -41.54117 -41.15151 -39.82465 -39.03800 -37.25254 -35.55080 -34.19801 -33.21540 -32.44830 -30.84920 -30.37622 -28.97725 -27.08093 -27.02424 -25.80294 -23.90035 -23.64654 -22.25924 -22.13464 -21.77259 -21.62777 -20.84978 -19.34383 -18.62178 -18.19195 -17.76893 -17.53875 -17.41060 -17.12408 -16.85499 -16.50819 -16.24033 -16.06296 -15.96379 -15.49156 -15.35976 -14.97823 -14.82198 -14.76494 -14.58305 -14.39732 -14.16888 -14.11741 -13.97402 -13.86102 -13.66618 -13.29219 -13.21881 -12.95053 -12.84274 -12.50349 -12.37331 -12.22069 -11.96823 -11.83911 -11.74679 -11.61918 -11.08275 -10.84239 -10.52660 -10.47331 -10.26378 -9.91435 -9.42211 -9.23455 -5.02302 0.23042 0.42146 1.12903 1.27757 1.39654 1.60734 1.65428 1.78458 1.97841 2.32244 2.39395 2.69265 3.06104 3.16471 3.39795 3.40643 3.45300 3.48052 3.64589 3.74842 3.77108 3.77666 3.83374 3.86986 3.92118 3.96512 4.05184 4.09694 4.20809 4.24570 4.31257 4.32095 4.43949 4.48619 4.50273 4.52329 4.56360 4.58008 4.65151 4.69353 4.74367 4.81220 4.95075 4.98573 5.27635 5.28254 5.31525 5.39144 5.45664 5.69469 5.84099 6.21610 6.24676 6.37068 6.56650 6.97783 7.19803 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.690 3.310 4 C -0.082 4.082 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.522 3.478 13 O -0.536 6.536 14 N -0.719 5.719 15 C 0.125 3.875 16 H 0.118 0.882 17 C -0.136 4.136 18 C -0.126 4.126 19 H 0.103 0.897 20 C 0.117 3.883 21 N -0.458 5.458 22 C -0.058 4.058 23 C -0.029 4.029 24 N -0.496 5.496 25 C 0.183 3.817 26 C -0.148 4.148 27 C -0.125 4.125 28 H 0.379 0.621 29 H 0.115 0.885 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.129 0.871 33 H 0.131 0.869 34 H 0.132 0.868 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.107 0.893 38 H 0.108 0.892 39 H 0.404 0.596 40 H 0.092 0.908 41 H 0.082 0.918 42 H 0.096 0.904 43 H 0.095 0.905 44 H 0.173 0.827 45 H 0.169 0.831 46 H 0.201 0.799 47 H 0.077 0.923 48 H 0.089 0.911 49 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.440 -0.736 1.331 5.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.592 3.408 4 C -0.083 4.083 5 C -0.171 4.171 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.308 3.692 13 O -0.413 6.413 14 N -0.370 5.370 15 C 0.020 3.980 16 H 0.136 0.864 17 C -0.175 4.175 18 C -0.146 4.146 19 H 0.121 0.879 20 C -0.006 4.006 21 N -0.141 5.141 22 C -0.191 4.191 23 C -0.177 4.177 24 N -0.214 5.214 25 C -0.100 4.100 26 C -0.186 4.186 27 C -0.144 4.144 28 H 0.227 0.773 29 H 0.132 0.868 30 H -0.182 1.182 31 H -0.179 1.179 32 H 0.146 0.854 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.239 0.761 40 H 0.111 0.889 41 H 0.101 0.899 42 H 0.114 0.886 43 H 0.113 0.887 44 H 0.191 0.809 45 H 0.186 0.814 46 H 0.218 0.782 47 H 0.095 0.905 48 H 0.107 0.893 49 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -3.831 -0.161 0.549 3.873 hybrid contribution -0.858 -0.877 0.039 1.227 sum -4.689 -1.038 0.587 4.838 Atomic orbital electron populations 1.86512 1.16939 1.81725 1.49225 1.25105 0.85348 1.10236 0.97299 0.94651 0.81133 0.77887 0.87117 1.20128 0.97974 0.93678 0.96502 1.20911 1.01557 0.99500 0.95162 1.20936 0.97505 0.93694 0.96970 1.21392 1.04129 0.95982 1.00593 1.18956 0.95206 0.82633 0.94512 1.85973 1.74443 1.20326 1.42288 1.22414 0.99689 0.91786 0.86241 1.21481 1.04291 0.95144 0.97291 1.20352 0.79272 0.82105 0.87440 1.90760 1.40592 1.62480 1.47432 1.45924 1.57920 1.09667 1.23532 1.22470 0.94197 0.93284 0.88089 0.86389 1.23367 0.96191 0.95529 1.02430 1.22791 0.97747 0.93014 1.01009 0.87896 1.21906 0.83915 0.93911 1.00892 1.45569 1.10145 1.44806 1.13598 1.22764 0.99807 1.06386 0.90117 1.22361 0.91934 1.06012 0.97364 1.70322 1.31383 1.15730 1.03948 1.24989 0.80666 1.04090 1.00206 1.23585 0.99110 0.96648 0.99292 1.20246 1.03323 0.93709 0.97131 0.77319 0.86801 1.18222 1.17947 0.85402 0.85112 0.84982 0.90881 0.90934 0.87435 0.87369 0.76121 0.88943 0.89891 0.88613 0.88651 0.80948 0.81368 0.78223 0.90465 0.89284 0.84883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.31 12.84 -35.23 -0.45 -0.76 16 2 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 3 Si 0.69 -0.57 29.80 -169.99 -5.07 -5.64 16 4 C -0.08 -0.07 5.35 -104.65 -0.56 -0.63 16 5 C -0.15 0.00 8.67 -39.56 -0.34 -0.35 16 6 C -0.07 -0.01 10.04 -39.61 -0.40 -0.41 16 7 C -0.20 -0.23 9.04 -39.43 -0.36 -0.58 16 8 C 0.13 0.27 6.69 -39.22 -0.26 0.01 16 9 O -0.32 -0.51 10.14 -19.41 -0.20 -0.71 16 10 C 0.07 -0.01 4.03 37.16 0.15 0.14 16 11 C -0.14 0.35 6.07 -27.88 -0.17 0.18 16 12 C 0.52 -0.36 7.83 -10.98 -0.09 -0.45 16 13 O -0.54 -1.89 15.58 5.56 0.09 -1.80 16 14 N -0.72 2.42 5.36 -53.02 -0.28 2.14 16 15 C 0.12 -0.36 4.24 -67.12 -0.28 -0.65 16 16 H 0.12 -0.08 7.46 -51.93 -0.39 -0.47 16 17 C -0.14 0.70 7.39 -25.92 -0.19 0.51 16 18 C -0.13 0.53 3.96 -89.81 -0.36 0.17 16 19 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 20 C 0.12 -0.50 5.99 -4.05 -0.02 -0.52 16 21 N -0.46 0.38 2.75 -118.58 -0.33 0.05 16 22 C -0.06 -0.01 11.58 -16.56 -0.19 -0.20 16 23 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 24 N -0.50 -2.16 11.25 -14.66 -0.16 -2.33 16 25 C 0.18 0.20 12.56 -90.38 -1.14 -0.93 16 26 C -0.15 0.48 7.43 -25.92 -0.19 0.29 16 27 C -0.13 -0.24 9.63 -39.43 -0.38 -0.62 16 28 H 0.38 -1.25 8.70 45.56 0.40 -0.86 16 29 H 0.11 0.06 7.96 -51.93 -0.41 -0.35 16 30 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 31 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 32 H 0.13 -0.26 4.90 -52.49 -0.26 -0.52 16 33 H 0.13 -0.25 8.06 -52.49 -0.42 -0.67 16 34 H 0.13 0.02 6.30 -52.49 -0.33 -0.31 16 35 H 0.07 0.01 7.62 -51.93 -0.40 -0.38 16 36 H 0.07 0.03 7.62 -51.93 -0.40 -0.37 16 37 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 38 H 0.11 -0.42 8.14 -51.93 -0.42 -0.85 16 39 H 0.40 -2.49 8.73 -40.82 -0.36 -2.85 16 40 H 0.09 -0.61 8.08 -51.93 -0.42 -1.03 16 41 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 42 H 0.10 -0.54 7.84 -51.93 -0.41 -0.94 16 43 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 44 H 0.17 -0.46 8.06 -52.49 -0.42 -0.88 16 45 H 0.17 0.12 8.06 -52.49 -0.42 -0.30 16 46 H 0.20 -0.38 8.06 -52.48 -0.42 -0.80 16 47 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 48 H 0.09 -0.38 7.90 -51.93 -0.41 -0.79 16 49 H 0.13 0.24 8.06 -52.49 -0.42 -0.18 16 LS Contribution 409.34 15.07 6.17 6.17 Total: 0.00 -11.31 409.34 -12.35 -23.66 By element: Atomic # 1 Polarization: -9.33 SS G_CDS: -7.23 Total: -16.56 kcal Atomic # 6 Polarization: 0.66 SS G_CDS: -4.89 Total: -4.23 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.78 Total: -0.14 kcal Atomic # 8 Polarization: -2.71 SS G_CDS: -0.56 Total: -3.27 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.07 Total: -5.64 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -11.31 -12.35 -23.66 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.805 kcal (2) G-P(sol) polarization free energy of solvation -11.311 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.350 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.662 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds