Wall clock time and date at job start Tue Mar 9 2021 13:08:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86293 * 109.47562 * 2 1 4 4 C 1.50696 * 109.46983 * 239.99583 * 2 1 3 5 5 C 1.38243 * 119.94672 * 120.23690 * 4 2 1 6 6 C 1.38166 * 120.05887 * 180.27735 * 5 4 2 7 7 C 1.38706 * 119.94172 * 359.74301 * 6 5 4 8 8 O 1.35900 * 120.05162 * 179.97438 * 7 6 5 9 9 C 1.42897 * 117.00281 * 0.02992 * 8 7 6 10 10 C 1.50703 * 109.47440 * 179.97438 * 9 8 7 11 11 O 1.21290 * 119.99478 * 359.97438 * 10 9 8 12 12 N 1.34773 * 120.00341 * 179.97438 * 10 9 8 13 13 C 1.46507 * 120.00021 * 179.97438 * 12 10 9 14 14 H 1.08997 * 112.84684 * 334.66202 * 13 12 10 15 15 C 1.53775 * 113.61188 * 105.86270 * 13 12 10 16 16 C 1.53963 * 87.01614 * 139.95185 * 15 13 12 17 17 H 1.08999 * 113.61348 * 89.19935 * 16 15 13 18 18 C 1.52998 * 113.66621 * 220.06763 * 16 15 13 19 19 N 1.46507 * 109.47038 * 272.55735 * 18 16 15 20 20 C 1.36886 * 126.39465 * 89.99811 * 19 18 16 21 21 C 1.34669 * 106.81429 * 179.97438 * 20 19 18 22 22 N 1.34123 * 108.02222 * 0.02562 * 21 20 19 23 23 C 1.30504 * 109.25456 * 359.72247 * 22 21 20 24 24 C 1.53779 * 87.11211 * 334.63656 * 16 15 13 25 25 C 1.38746 * 119.89054 * 0.02562 * 7 6 5 26 26 N 1.48002 * 120.02857 * 180.02562 * 25 7 6 27 27 O 1.21803 * 120.00399 * 179.97438 * 26 25 7 28 28 O 1.21799 * 119.99893 * 359.97249 * 26 25 7 29 29 C 1.38126 * 119.94576 * 359.97438 * 25 7 6 30 30 H 0.96698 * 113.99537 * 300.00063 * 1 2 3 31 31 H 1.09003 * 109.46930 * 119.99981 * 2 1 3 32 32 H 1.48503 * 110.00275 * 178.68054 * 3 2 1 33 33 H 1.48500 * 109.99974 * 299.99709 * 3 2 1 34 34 H 1.08008 * 119.96972 * 0.04813 * 5 4 2 35 35 H 1.08006 * 120.02888 * 179.72594 * 6 5 4 36 36 H 1.09002 * 109.46955 * 299.99040 * 9 8 7 37 37 H 1.08997 * 109.47429 * 59.99669 * 9 8 7 38 38 H 0.96998 * 119.99891 * 359.97438 * 12 10 9 39 39 H 1.09002 * 113.61332 * 254.52410 * 15 13 12 40 40 H 1.09001 * 113.61771 * 25.43659 * 15 13 12 41 41 H 1.09002 * 109.47488 * 32.55776 * 18 16 15 42 42 H 1.09001 * 109.47312 * 152.56050 * 18 16 15 43 43 H 1.07997 * 126.59071 * 0.03938 * 20 19 18 44 44 H 1.07996 * 125.98717 * 179.97438 * 21 20 19 45 45 H 1.08002 * 125.65027 * 180.29382 * 23 22 21 46 46 H 1.09008 * 113.61378 * 270.81522 * 24 16 15 47 47 H 1.08997 * 113.69573 * 139.92128 * 24 16 15 48 48 H 1.08002 * 119.97098 * 179.97438 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7300 -0.0391 -2.1372 6 6 3.1871 -0.6866 -3.2690 7 6 2.8483 -2.0129 -3.4922 8 8 3.2962 -2.6518 -4.6049 9 6 4.1127 -1.8967 -5.5022 10 6 4.5122 -2.7636 -6.6684 11 8 4.1352 -3.9150 -6.7252 12 7 5.2884 -2.2595 -7.6481 13 6 5.6772 -3.1026 -8.7815 14 1 5.6761 -4.1651 -8.5386 15 6 4.9303 -2.7674 -10.0832 16 6 6.2680 -2.9879 -10.8129 17 1 6.4289 -4.0190 -11.1274 18 6 6.5313 -1.9775 -11.9312 19 7 5.9323 -2.4615 -13.1776 20 6 4.6615 -2.2094 -13.6195 21 6 4.5275 -2.8412 -14.8012 22 7 5.6846 -3.4625 -15.0731 23 6 6.5326 -3.2349 -14.1076 24 6 6.9607 -2.6332 -9.4866 25 6 2.0505 -2.6860 -2.5782 26 7 1.6876 -4.1015 -2.8130 27 8 0.9876 -4.6921 -2.0101 28 8 2.0889 -4.6759 -3.8093 29 6 1.5961 -2.0343 -1.4483 30 1 -0.3932 0.4417 0.7651 31 1 1.7923 -0.5138 0.8900 32 1 3.5347 1.7701 0.0321 33 1 1.5617 2.4678 -1.2085 34 1 2.9940 0.9936 -1.9627 35 1 3.8075 -0.1602 -3.9794 36 1 3.5527 -1.0347 -5.8650 37 1 5.0068 -1.5557 -4.9803 38 1 5.5896 -1.3386 -7.6028 39 1 4.1631 -3.4957 -10.3464 40 1 4.5724 -1.7388 -10.1289 41 1 6.0898 -1.0172 -11.6648 42 1 7.6062 -1.8580 -12.0672 43 1 3.9111 -1.6168 -13.1174 44 1 3.6430 -2.8473 -15.4208 45 1 7.5459 -3.6055 -14.0593 46 1 7.1589 -1.5677 -9.3688 47 1 7.8306 -3.2523 -9.2675 48 1 0.9747 -2.5577 -0.7367 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:30 Heat of formation + Delta-G solvation = 33.618928 kcal Electronic energy + Delta-G solvation = -34752.036125 eV Core-core repulsion = 29780.535031 eV Total energy + Delta-G solvation = -4971.501094 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.151 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -43.06173 -42.96822 -41.85740 -41.23094 -40.04106 -39.15213 -37.60568 -37.15974 -35.57710 -34.18975 -33.58054 -32.52523 -30.55316 -30.25980 -28.69016 -27.64388 -27.08236 -26.73092 -24.74375 -23.79447 -22.73825 -22.25427 -22.01467 -21.72654 -21.00143 -20.45054 -19.52112 -19.19453 -18.76558 -18.62421 -18.39846 -18.33757 -17.73778 -17.67427 -17.29297 -16.73495 -16.59649 -16.18039 -16.03693 -15.85323 -15.56047 -15.31419 -15.26919 -14.86884 -14.65520 -14.54557 -14.41115 -14.17353 -14.04358 -13.93608 -13.89519 -13.71426 -13.17821 -13.08282 -12.89501 -12.60940 -12.52698 -12.25018 -12.23651 -12.23039 -11.84146 -11.76457 -11.74128 -11.06396 -10.98069 -10.84191 -10.68279 -10.52823 -10.32535 -9.92515 -9.41569 -5.26236 -1.17986 -0.42411 0.33883 0.48868 0.95284 1.00294 1.14480 1.29243 1.33972 1.61931 1.77056 1.87153 2.11325 2.32896 2.84175 2.95601 3.03203 3.04010 3.13858 3.27192 3.37184 3.38628 3.43995 3.47423 3.48519 3.57318 3.69909 3.75317 3.83848 3.88124 3.97226 4.01309 4.08567 4.09720 4.23797 4.28858 4.35042 4.41671 4.46251 4.55939 4.63165 4.63762 4.75010 4.80975 4.86858 4.90726 5.21132 5.31831 5.38813 5.65917 5.84571 6.12570 6.24886 6.35054 6.91069 6.91840 7.20217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C -0.032 4.032 6 C -0.208 4.208 7 C 0.199 3.801 8 O -0.253 6.253 9 C 0.030 3.970 10 C 0.515 3.485 11 O -0.493 6.493 12 N -0.719 5.719 13 C 0.127 3.873 14 H 0.120 0.880 15 C -0.147 4.147 16 C -0.126 4.126 17 H 0.104 0.896 18 C 0.117 3.883 19 N -0.458 5.458 20 C -0.055 4.055 21 C -0.030 4.030 22 N -0.495 5.495 23 C 0.180 3.820 24 C -0.135 4.135 25 C -0.073 4.073 26 N 0.029 4.971 27 O -0.174 6.174 28 O -0.118 6.118 29 C 0.013 3.987 30 H 0.388 0.612 31 H 0.083 0.917 32 H -0.251 1.251 33 H -0.248 1.248 34 H 0.140 0.860 35 H 0.156 0.844 36 H 0.101 0.899 37 H 0.102 0.898 38 H 0.402 0.598 39 H 0.078 0.922 40 H 0.087 0.913 41 H 0.093 0.907 42 H 0.097 0.903 43 H 0.171 0.829 44 H 0.169 0.831 45 H 0.203 0.797 46 H 0.092 0.908 47 H 0.084 0.916 48 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.880 12.512 5.786 14.623 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.112 4.112 5 C -0.050 4.050 6 C -0.227 4.227 7 C 0.149 3.851 8 O -0.162 6.162 9 C -0.049 4.049 10 C 0.298 3.702 11 O -0.364 6.364 12 N -0.372 5.372 13 C 0.023 3.977 14 H 0.138 0.862 15 C -0.185 4.185 16 C -0.146 4.146 17 H 0.123 0.877 18 C -0.006 4.006 19 N -0.142 5.142 20 C -0.187 4.187 21 C -0.177 4.177 22 N -0.213 5.213 23 C -0.102 4.102 24 C -0.174 4.174 25 C -0.158 4.158 26 N 0.549 4.451 27 O -0.383 6.383 28 O -0.341 6.341 29 C -0.006 4.006 30 H 0.237 0.763 31 H 0.101 0.899 32 H -0.176 1.176 33 H -0.172 1.172 34 H 0.157 0.843 35 H 0.173 0.827 36 H 0.119 0.881 37 H 0.119 0.881 38 H 0.236 0.764 39 H 0.097 0.903 40 H 0.106 0.894 41 H 0.111 0.889 42 H 0.116 0.884 43 H 0.189 0.811 44 H 0.186 0.814 45 H 0.220 0.780 46 H 0.110 0.890 47 H 0.103 0.897 48 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 5.489 11.968 4.290 13.848 hybrid contribution 0.000 0.376 0.568 0.681 sum 5.489 12.344 4.858 14.356 Atomic orbital electron populations 1.86490 1.16650 1.82001 1.50045 1.24642 0.86322 1.10650 0.96520 0.94627 0.80637 0.77578 0.88025 1.19249 1.00986 0.93216 0.97755 1.21113 0.92912 0.99295 0.91637 1.21192 1.07223 0.92839 1.01405 1.18636 0.90098 0.90680 0.85643 1.86503 1.62966 1.37532 1.29172 1.22741 0.96362 0.94977 0.90796 1.19855 0.79282 0.88127 0.82917 1.90877 1.51728 1.17143 1.76689 1.45768 1.52874 1.15843 1.22752 1.22518 0.94723 0.96997 0.83454 0.86178 1.23603 0.96995 1.02867 0.95062 1.22825 0.97776 1.00639 0.93310 0.87738 1.21894 0.99793 0.97479 0.81406 1.45562 1.11745 1.39184 1.17661 1.22715 0.88174 1.08394 0.99449 1.22357 0.97673 1.00993 0.96707 1.70321 1.01907 1.23043 1.25996 1.25045 1.00520 0.97879 0.86782 1.23362 0.97504 1.02585 0.93963 1.20576 1.10387 0.84238 1.00582 1.43304 0.99210 1.02174 1.00383 1.94554 1.35140 1.66504 1.42134 1.94697 1.54910 1.67513 1.17020 1.20819 0.93053 0.93472 0.93220 0.76344 0.89909 1.17608 1.17184 0.84261 0.82652 0.88092 0.88054 0.76353 0.90328 0.89425 0.88900 0.88423 0.81145 0.81397 0.78011 0.88989 0.89703 0.81586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.04 12.74 -35.23 -0.45 0.59 16 2 C -0.07 0.19 2.81 36.00 0.10 0.29 16 3 Si 0.69 -2.79 29.78 -169.99 -5.06 -7.85 16 4 C -0.11 0.03 5.42 -104.60 -0.57 -0.54 16 5 C -0.03 0.04 8.66 -39.61 -0.34 -0.30 16 6 C -0.21 0.37 9.04 -39.43 -0.36 0.01 16 7 C 0.20 0.32 6.67 -39.22 -0.26 0.06 16 8 O -0.25 -0.66 7.68 -49.78 -0.38 -1.04 16 9 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 10 C 0.51 0.08 7.91 -10.99 -0.09 0.00 16 11 O -0.49 -2.91 16.12 -14.36 -0.23 -3.14 16 12 N -0.72 2.55 5.36 -53.01 -0.28 2.27 16 13 C 0.13 -0.36 4.21 -67.12 -0.28 -0.64 16 14 H 0.12 -0.04 7.50 -51.93 -0.39 -0.43 16 15 C -0.15 0.45 7.45 -25.83 -0.19 0.26 16 16 C -0.13 0.53 3.96 -89.71 -0.36 0.17 16 17 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 18 C 0.12 -0.51 5.99 -4.04 -0.02 -0.54 16 19 N -0.46 0.38 2.75 -118.57 -0.33 0.05 16 20 C -0.05 -0.01 11.58 -16.56 -0.19 -0.21 16 21 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 22 N -0.49 -2.19 11.25 -14.67 -0.17 -2.36 16 23 C 0.18 0.19 12.56 -90.38 -1.14 -0.94 16 24 C -0.14 0.73 7.39 -25.92 -0.19 0.54 16 25 C -0.07 -0.27 6.87 -79.81 -0.55 -0.81 16 26 N 0.03 0.20 4.45 34.03 0.15 0.35 16 27 O -0.17 -1.30 18.45 -29.46 -0.54 -1.84 16 28 O -0.12 -1.05 17.24 -36.49 -0.63 -1.67 16 29 C 0.01 0.02 9.11 -39.60 -0.36 -0.34 16 30 H 0.39 -2.65 8.74 45.56 0.40 -2.25 16 31 H 0.08 -0.35 7.96 -51.93 -0.41 -0.77 16 32 H -0.25 0.54 7.11 56.52 0.40 0.94 16 33 H -0.25 0.30 7.11 56.52 0.40 0.70 16 34 H 0.14 -0.42 4.87 -52.48 -0.26 -0.68 16 35 H 0.16 -0.87 6.30 -52.48 -0.33 -1.20 16 36 H 0.10 -0.56 7.66 -51.93 -0.40 -0.95 16 37 H 0.10 -0.58 7.66 -51.93 -0.40 -0.97 16 38 H 0.40 -2.87 8.71 -40.82 -0.36 -3.22 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 40 H 0.09 -0.36 7.90 -51.93 -0.41 -0.77 16 41 H 0.09 -0.51 7.85 -51.93 -0.41 -0.92 16 42 H 0.10 -0.56 8.14 -51.93 -0.42 -0.98 16 43 H 0.17 -0.39 8.06 -52.49 -0.42 -0.81 16 44 H 0.17 0.17 8.06 -52.49 -0.42 -0.26 16 45 H 0.20 -0.44 8.06 -52.49 -0.42 -0.86 16 46 H 0.09 -0.65 8.07 -51.92 -0.42 -1.07 16 47 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 48 H 0.17 0.17 7.61 -52.49 -0.40 -0.23 16 LS Contribution 414.36 15.07 6.24 6.24 Total: 0.00 -15.93 414.36 -12.43 -28.36 By element: Atomic # 1 Polarization: -10.86 SS G_CDS: -5.94 Total: -16.80 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -4.82 Total: -3.17 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.62 Total: 0.32 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -2.24 Total: -7.11 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: -5.06 Total: -7.85 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -15.93 -12.43 -28.36 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.983 kcal (2) G-P(sol) polarization free energy of solvation -15.930 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.364 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.619 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds