Wall clock time and date at job start Tue Mar 9 2021 13:08:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86300 * 109.46737 * 2 1 4 4 C 1.50699 * 109.47374 * 120.00322 * 2 1 3 5 5 C 1.38240 * 119.94242 * 64.99939 * 4 2 1 6 6 C 1.38180 * 120.07427 * 179.97438 * 5 4 2 7 7 C 1.38686 * 119.95247 * 0.02721 * 6 5 4 8 8 O 1.35914 * 120.05815 * 179.97438 * 7 6 5 9 9 C 1.42906 * 116.99892 * 0.02562 * 8 7 6 10 10 C 1.50706 * 109.46702 * 179.97438 * 9 8 7 11 11 O 1.21279 * 120.00072 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99762 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 H 1.09001 * 112.84832 * 25.33456 * 13 12 10 15 15 C 1.53777 * 113.61861 * 156.53091 * 13 12 10 16 16 C 1.53778 * 87.08190 * 139.98263 * 15 13 12 17 17 H 1.09002 * 113.60901 * 89.12190 * 16 15 13 18 18 C 1.52997 * 113.61452 * 219.93659 * 16 15 13 19 19 N 1.46497 * 109.47191 * 185.00523 * 18 16 15 20 20 C 1.36885 * 126.40306 * 89.99658 * 19 18 16 21 21 C 1.34665 * 106.81905 * 179.97438 * 20 19 18 22 22 N 1.34128 * 108.02325 * 0.02562 * 21 20 19 23 23 C 1.30505 * 109.25361 * 359.71756 * 22 21 20 24 24 C 1.53775 * 113.61719 * 254.14386 * 13 12 10 25 25 C 1.38834 * 119.87884 * 0.24983 * 7 6 5 26 26 Br 1.89106 * 120.03113 * 179.73275 * 25 7 6 27 27 C 1.38191 * 119.93057 * 359.49453 * 25 7 6 28 28 H 0.96696 * 114.00217 * 59.99801 * 1 2 3 29 29 H 1.09007 * 109.46943 * 240.00262 * 2 1 3 30 30 H 1.48499 * 109.99995 * 60.00375 * 3 2 1 31 31 H 1.48501 * 109.99785 * 181.31674 * 3 2 1 32 32 H 1.07998 * 119.96281 * 359.97438 * 5 4 2 33 33 H 1.07997 * 120.02990 * 179.97438 * 6 5 4 34 34 H 1.09000 * 109.46890 * 59.99977 * 9 8 7 35 35 H 1.09000 * 109.47141 * 299.99620 * 9 8 7 36 36 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 37 37 H 1.08998 * 113.61406 * 254.53704 * 15 13 12 38 38 H 1.09004 * 113.61220 * 25.34876 * 15 13 12 39 39 H 1.09007 * 109.47317 * 305.00121 * 18 16 15 40 40 H 1.08998 * 109.47173 * 65.00182 * 18 16 15 41 41 H 1.08000 * 126.58811 * 0.04158 * 20 19 18 42 42 H 1.07999 * 125.99048 * 180.02562 * 21 20 19 43 43 H 1.08000 * 125.64745 * 180.29364 * 23 22 21 44 44 H 1.09004 * 113.61507 * 334.56505 * 24 13 12 45 45 H 1.08997 * 113.61991 * 105.46619 * 24 13 12 46 46 H 1.07994 * 119.97881 * 180.23626 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 1.2304 5 6 1.6842 -2.0603 1.3970 6 6 2.1440 -2.7146 2.5239 7 6 2.8539 -2.0159 3.4889 8 8 3.3068 -2.6572 4.5984 9 6 3.0159 -4.0522 4.7055 10 6 3.5929 -4.5884 5.9904 11 8 4.1944 -3.8488 6.7402 12 7 3.4405 -5.8898 6.3062 13 6 4.0019 -6.4112 7.5548 14 1 4.1164 -5.6437 8.3204 15 6 3.3040 -7.6852 8.0594 16 6 4.7001 -8.2035 8.4429 17 1 5.0066 -7.9267 9.4516 18 6 4.9043 -9.6906 8.1469 19 7 6.2121 -10.1142 8.6534 20 6 6.4792 -10.6048 9.9031 21 6 7.7993 -10.8675 9.9447 22 7 8.3242 -10.5456 8.7531 23 6 7.3783 -10.0990 7.9727 24 6 5.2600 -7.2719 7.3526 25 6 3.0962 -0.6591 3.3224 26 35 4.0571 0.2994 4.6392 27 6 2.6386 -0.0108 2.1910 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 -0.8901 30 1 1.5615 2.4679 1.2085 31 1 3.5346 1.7704 -0.0321 32 1 1.1310 -2.6041 0.6456 33 1 1.9501 -3.7691 2.6535 34 1 3.4572 -4.5813 3.8608 35 1 1.9359 -4.1995 4.7025 36 1 2.9598 -6.4813 5.7063 37 1 2.6509 -7.5155 8.9153 38 1 2.8244 -8.2625 7.2689 39 1 4.1206 -10.2694 8.6357 40 1 4.8606 -9.8562 7.0705 41 1 5.7677 -10.7537 10.7019 42 1 8.3406 -11.2672 10.7894 43 1 7.5073 -9.7696 6.9522 44 1 5.3175 -7.7367 6.3683 45 1 6.1838 -6.7691 7.6388 46 1 2.8299 1.0438 2.0588 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14468608_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:56 Heat of formation + Delta-G solvation = 30.457251 kcal Electronic energy + Delta-G solvation = -30271.589473 eV Core-core repulsion = 25791.149710 eV Total energy + Delta-G solvation = -4480.439762 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.067 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.94977 -41.80531 -41.08017 -39.76910 -38.90990 -37.27134 -35.48337 -34.11038 -33.64760 -32.33342 -30.72342 -30.40191 -29.87043 -28.47064 -26.75600 -26.37120 -24.60556 -23.72889 -22.36522 -22.27615 -21.89887 -21.62894 -20.69804 -19.67194 -18.63160 -18.41854 -18.24932 -17.58244 -17.45934 -17.12676 -16.74883 -16.37516 -16.26166 -15.98762 -15.76607 -15.43696 -15.25712 -15.06721 -14.83923 -14.60840 -14.39976 -14.31435 -14.13647 -14.02454 -13.87366 -13.74324 -13.52493 -13.43394 -12.97649 -12.56826 -12.37709 -12.25877 -12.21916 -12.15340 -11.99166 -11.88711 -11.51542 -11.38272 -11.04083 -10.91328 -10.50171 -10.31809 -10.15897 -10.14916 -9.45133 -9.42698 -5.01670 -0.18274 -0.05324 0.46184 1.14395 1.27200 1.34974 1.39043 1.58470 1.93290 1.94549 2.22886 2.25915 2.44692 3.26894 3.34153 3.42700 3.45187 3.57185 3.68012 3.71064 3.77642 3.79560 3.88224 3.96121 3.98104 4.02836 4.07205 4.11248 4.17727 4.20525 4.30683 4.41999 4.58832 4.60470 4.67338 4.68911 4.71113 4.76840 4.80705 4.92009 4.93139 5.01484 5.13971 5.18193 5.33863 5.35098 5.49600 5.82561 5.96486 6.32266 6.42423 6.92434 7.11141 7.16242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.058 4.058 3 Si 0.749 3.251 4 C -0.120 4.120 5 C -0.028 4.028 6 C -0.189 4.189 7 C 0.151 3.849 8 O -0.306 6.306 9 C 0.031 3.969 10 C 0.511 3.489 11 O -0.573 6.573 12 N -0.695 5.695 13 C 0.115 3.885 14 H 0.083 0.917 15 C -0.113 4.113 16 C -0.119 4.119 17 H 0.083 0.917 18 C 0.115 3.885 19 N -0.453 5.453 20 C -0.049 4.049 21 C -0.068 4.068 22 N -0.549 5.549 23 C 0.176 3.824 24 C -0.146 4.146 25 C -0.143 4.143 26 Br -0.052 7.052 27 C -0.077 4.077 28 H 0.406 0.594 29 H 0.110 0.890 30 H -0.302 1.302 31 H -0.292 1.292 32 H 0.170 0.830 33 H 0.184 0.816 34 H 0.134 0.866 35 H 0.132 0.868 36 H 0.424 0.576 37 H 0.084 0.916 38 H 0.125 0.875 39 H 0.115 0.885 40 H 0.120 0.880 41 H 0.200 0.800 42 H 0.170 0.830 43 H 0.224 0.776 44 H 0.111 0.889 45 H 0.046 0.954 46 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.614 -6.624 -9.130 15.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.169 4.169 3 Si 0.658 3.342 4 C -0.122 4.122 5 C -0.046 4.046 6 C -0.208 4.208 7 C 0.103 3.897 8 O -0.218 6.218 9 C -0.047 4.047 10 C 0.297 3.703 11 O -0.451 6.451 12 N -0.350 5.350 13 C 0.010 3.990 14 H 0.101 0.899 15 C -0.151 4.151 16 C -0.138 4.138 17 H 0.101 0.899 18 C -0.006 4.006 19 N -0.135 5.135 20 C -0.182 4.182 21 C -0.214 4.214 22 N -0.268 5.268 23 C -0.107 4.107 24 C -0.184 4.184 25 C -0.223 4.223 26 Br 0.033 6.967 27 C -0.096 4.096 28 H 0.257 0.743 29 H 0.127 0.873 30 H -0.230 1.230 31 H -0.219 1.219 32 H 0.187 0.813 33 H 0.201 0.799 34 H 0.151 0.849 35 H 0.150 0.850 36 H 0.263 0.737 37 H 0.103 0.897 38 H 0.143 0.857 39 H 0.134 0.866 40 H 0.139 0.861 41 H 0.217 0.783 42 H 0.188 0.812 43 H 0.240 0.760 44 H 0.129 0.871 45 H 0.065 0.935 46 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -8.476 -5.406 -7.240 12.389 hybrid contribution -0.445 -0.219 0.548 0.739 sum -8.922 -5.625 -6.692 12.491 Atomic orbital electron populations 1.86431 1.16692 1.82234 1.51665 1.24449 0.86139 1.09273 0.97057 0.94709 0.77666 0.77027 0.84835 1.19610 1.00735 0.95495 0.96314 1.21331 0.93916 0.92621 0.96760 1.21726 1.01990 1.02672 0.94410 1.18746 0.93716 0.90139 0.87134 1.86247 1.73352 1.23796 1.38394 1.22925 1.04157 0.80088 0.97490 1.20558 0.79463 0.82982 0.87291 1.90797 1.42742 1.58724 1.52816 1.45614 1.57394 1.08499 1.23445 1.22449 0.95204 0.94949 0.86373 0.89914 1.23292 0.95279 0.93721 1.02802 1.22672 0.98153 0.93560 0.99451 0.89871 1.22203 0.81437 0.94381 1.02589 1.45761 1.09994 1.46553 1.11174 1.23153 0.98746 1.06362 0.89974 1.22625 0.93416 1.08352 0.97056 1.70238 1.33359 1.18704 1.04473 1.25417 0.80593 1.04038 1.00658 1.23633 0.97231 0.97255 1.00327 1.21078 1.09619 0.93568 0.98026 1.96747 1.73364 1.73724 1.52875 1.20767 0.97694 0.98918 0.92233 0.74277 0.87282 1.23037 1.21943 0.81271 0.79898 0.84864 0.85004 0.73662 0.89739 0.85665 0.86649 0.86147 0.78266 0.81228 0.75961 0.87112 0.93546 0.86180 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.18 12.81 -148.98 -1.91 0.27 16 2 C -0.06 0.20 2.79 71.24 0.20 0.40 16 3 Si 0.75 -1.04 29.85 68.60 2.05 1.01 16 4 C -0.12 -0.25 5.38 -19.85 -0.11 -0.36 16 5 C -0.03 0.08 9.68 22.26 0.22 0.29 16 6 C -0.19 0.64 9.04 22.36 0.20 0.84 16 7 C 0.15 0.70 6.68 22.52 0.15 0.85 16 8 O -0.31 -1.83 9.01 -73.54 -0.66 -2.50 16 9 C 0.03 -0.16 5.22 71.24 0.37 0.21 16 10 C 0.51 0.47 7.91 87.66 0.69 1.17 16 11 O -0.57 -8.15 16.12 16.01 0.26 -7.89 16 12 N -0.70 5.47 5.36 -440.06 -2.36 3.11 16 13 C 0.12 -0.62 4.21 45.52 0.19 -0.43 16 14 H 0.08 0.19 7.50 -2.39 -0.02 0.17 16 15 C -0.11 1.42 7.39 31.12 0.23 1.65 16 16 C -0.12 1.11 3.96 -10.21 -0.04 1.07 16 17 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 18 C 0.11 -1.29 5.99 86.38 0.52 -0.77 16 19 N -0.45 1.12 2.75 -529.07 -1.46 -0.33 16 20 C -0.05 -0.01 11.58 83.08 0.96 0.95 16 21 C -0.07 -0.44 11.87 83.52 0.99 0.55 16 22 N -0.55 -5.70 11.25 -200.31 -2.25 -7.95 16 23 C 0.18 0.43 12.56 180.26 2.26 2.69 16 24 C -0.15 0.94 7.45 31.18 0.23 1.17 16 25 C -0.14 -1.34 6.24 22.40 0.14 -1.20 16 26 Br -0.05 -0.66 33.16 -20.37 -0.68 -1.34 16 27 C -0.08 -0.58 8.40 22.27 0.19 -0.39 16 28 H 0.41 -5.70 8.74 -74.06 -0.65 -6.34 16 29 H 0.11 -1.00 7.96 -2.38 -0.02 -1.02 16 30 H -0.30 -2.28 7.05 99.48 0.70 -1.58 16 31 H -0.29 -1.50 7.11 99.48 0.71 -0.79 16 32 H 0.17 -1.48 8.06 -2.91 -0.02 -1.50 16 33 H 0.18 -2.32 6.30 -2.91 -0.02 -2.34 16 34 H 0.13 -1.69 7.66 -2.39 -0.02 -1.71 16 35 H 0.13 -1.62 7.66 -2.39 -0.02 -1.64 16 36 H 0.42 -7.16 8.71 -92.71 -0.81 -7.97 16 37 H 0.08 -0.98 8.14 -2.39 -0.02 -1.00 16 38 H 0.13 -2.32 8.07 -2.38 -0.02 -2.34 16 39 H 0.12 -1.66 8.14 -2.38 -0.02 -1.68 16 40 H 0.12 -1.87 7.86 -2.39 -0.02 -1.89 16 41 H 0.20 -1.28 8.06 -2.91 -0.02 -1.30 16 42 H 0.17 0.67 8.06 -2.91 -0.02 0.64 16 43 H 0.22 -0.94 8.06 -2.91 -0.02 -0.97 16 44 H 0.11 -1.20 7.91 -2.39 -0.02 -1.22 16 45 H 0.05 0.02 8.14 -2.39 -0.02 0.00 16 46 H 0.12 1.06 4.86 -2.91 -0.01 1.05 16 Total: 0.00 -40.78 408.84 0.01 -40.77 By element: Atomic # 1 Polarization: -33.46 SS G_CDS: -0.38 Total: -33.85 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: 7.40 Total: 8.69 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -6.07 Total: -5.17 kcal Atomic # 8 Polarization: -7.81 SS G_CDS: -2.31 Total: -10.12 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: 2.05 Total: 1.01 kcal Atomic # 35 Polarization: -0.66 SS G_CDS: -0.68 Total: -1.34 kcal Total: -40.78 0.01 -40.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.230 kcal (2) G-P(sol) polarization free energy of solvation -40.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.447 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.773 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds