Wall clock time and date at job start Tue Mar 9 2021 13:09:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86311 * 109.46756 * 2 1 4 4 C 1.50697 * 109.47393 * 240.00388 * 2 1 3 5 5 C 1.35456 * 125.56737 * 119.96868 * 4 2 1 6 6 C 1.39831 * 107.86488 * 180.02562 * 5 4 2 7 7 C 1.37871 * 107.09089 * 0.02562 * 6 5 4 8 8 C 1.46675 * 126.23727 * 179.97438 * 7 6 5 9 9 O 1.21689 * 120.00032 * 0.02562 * 8 7 6 10 10 N 1.34778 * 120.00119 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00466 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.84674 * 23.80211 * 11 10 8 13 13 C 1.53776 * 113.61794 * 154.99759 * 11 10 8 14 14 C 1.53781 * 87.08274 * 140.06604 * 13 11 10 15 15 H 1.08999 * 113.61361 * 89.19657 * 14 13 11 16 16 C 1.52999 * 113.61564 * 220.01823 * 14 13 11 17 17 N 1.46496 * 109.47130 * 183.47035 * 16 14 13 18 18 C 1.36880 * 126.39785 * 89.99667 * 17 16 14 19 19 C 1.34674 * 106.82015 * 179.73791 * 18 17 16 20 20 N 1.34130 * 108.01710 * 0.23538 * 19 18 17 21 21 C 1.30496 * 109.26014 * 359.97438 * 20 19 18 22 22 C 1.53784 * 87.17322 * 334.60939 * 14 13 11 23 23 N 1.35531 * 125.56313 * 300.28489 * 4 2 1 24 24 H 0.96702 * 114.00364 * 60.00024 * 1 2 3 25 25 H 1.08993 * 109.47431 * 119.99952 * 2 1 3 26 26 H 1.48496 * 109.99796 * 60.00296 * 3 2 1 27 27 H 1.48498 * 109.99788 * 181.31977 * 3 2 1 28 28 H 1.08004 * 126.06576 * 0.02562 * 5 4 2 29 29 H 1.08006 * 126.45472 * 179.97438 * 6 5 4 30 30 H 0.97003 * 119.99870 * 359.97438 * 10 8 7 31 31 H 1.09004 * 113.61147 * 25.51919 * 13 11 10 32 32 H 1.09003 * 113.61426 * 254.61618 * 13 11 10 33 33 H 1.09003 * 109.46925 * 63.47085 * 16 14 13 34 34 H 1.08997 * 109.47224 * 303.47355 * 16 14 13 35 35 H 1.08002 * 126.59253 * 0.02562 * 18 17 16 36 36 H 1.07997 * 125.99347 * 180.23004 * 19 18 17 37 37 H 1.07999 * 125.65629 * 180.02562 * 21 20 19 38 38 H 1.09000 * 113.61486 * 139.93283 * 22 14 13 39 39 H 1.08991 * 113.61455 * 270.84153 * 22 14 13 40 40 H 0.97005 * 125.67802 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7130 -0.1633 -2.1921 6 6 2.9563 -1.1454 -3.1572 7 6 2.3014 -2.2873 -2.7474 8 6 2.2773 -3.5733 -3.4524 9 8 2.8757 -3.7019 -4.5042 10 7 1.5924 -4.6125 -2.9353 11 6 1.5678 -5.8968 -3.6396 12 1 2.4221 -6.0322 -4.3030 13 6 1.3068 -7.0999 -2.7181 14 6 0.4159 -7.6640 -3.8375 15 1 0.9550 -8.2836 -4.5542 16 6 -0.8657 -8.3251 -3.3264 17 7 -1.6016 -8.9008 -4.4547 18 6 -1.4673 -10.1701 -4.9492 19 6 -2.3310 -10.2815 -5.9765 20 7 -2.9715 -9.1105 -6.1089 21 6 -2.5379 -8.2778 -5.2025 22 6 0.2162 -6.2128 -4.3056 23 7 1.6700 -1.9990 -1.5586 24 1 -0.3934 0.4417 -0.7650 25 1 1.7924 -0.5138 0.8899 26 1 1.5614 2.4679 1.2085 27 1 3.5345 1.7705 -0.0321 28 1 3.0826 0.8514 -2.2101 29 1 3.5456 -1.0307 -4.0551 30 1 1.1157 -4.5101 -2.0967 31 1 0.7590 -6.8444 -1.8111 32 1 2.1950 -7.7008 -2.5223 33 1 -1.4865 -7.5789 -2.8305 34 1 -0.6104 -9.1137 -2.6187 35 1 -0.8005 -10.9366 -4.5828 36 1 -2.4816 -11.1598 -6.5867 37 1 -2.8747 -7.2603 -5.0698 38 1 0.2252 -6.0985 -5.3896 39 1 -0.6303 -5.7144 -3.8334 40 1 1.1296 -2.6162 -1.0410 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:04 Heat of formation + Delta-G solvation = 72.032613 kcal Electronic energy + Delta-G solvation = -23638.135199 eV Core-core repulsion = 20036.336323 eV Total energy + Delta-G solvation = -3601.798876 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.137 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -42.96801 -42.58635 -41.06506 -39.38982 -37.84190 -35.55945 -34.15337 -32.21416 -31.44558 -30.37331 -29.02856 -27.09478 -26.98104 -24.62414 -22.91130 -22.25235 -21.85776 -21.51744 -21.46154 -20.88746 -19.79034 -18.59087 -18.20542 -17.46653 -16.80496 -16.69597 -16.29428 -16.07118 -15.92212 -15.46291 -15.24616 -15.16371 -14.81012 -14.71522 -14.48540 -14.28356 -14.08193 -14.05236 -13.87904 -13.80662 -13.61139 -13.20499 -12.49954 -12.31262 -12.21460 -12.11062 -11.74580 -11.23414 -10.83640 -10.82284 -10.52135 -10.28751 -10.13937 -9.41380 -9.32407 -5.10878 0.28663 1.05453 1.13749 1.47108 1.58924 1.75600 1.78811 1.93198 2.07644 2.29368 2.33246 3.07070 3.16687 3.20705 3.39720 3.45326 3.47227 3.68613 3.76116 3.84148 3.91280 3.97065 4.10008 4.15249 4.20894 4.31121 4.32214 4.44336 4.50444 4.57106 4.64953 4.76404 4.81829 4.92008 4.96246 5.02648 5.26817 5.32211 5.52934 5.76191 5.84874 6.12137 6.25127 6.29585 6.32276 7.02559 7.20590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.055 4.055 3 Si 0.722 3.278 4 C 0.023 3.977 5 C -0.200 4.200 6 C -0.096 4.096 7 C -0.054 4.054 8 C 0.592 3.408 9 O -0.522 6.522 10 N -0.723 5.723 11 C 0.127 3.873 12 H 0.121 0.879 13 C -0.137 4.137 14 C -0.125 4.125 15 H 0.104 0.896 16 C 0.117 3.883 17 N -0.458 5.458 18 C -0.058 4.058 19 C -0.029 4.029 20 N -0.495 5.495 21 C 0.183 3.817 22 C -0.147 4.147 23 N -0.524 5.524 24 H 0.384 0.616 25 H 0.115 0.885 26 H -0.253 1.253 27 H -0.252 1.252 28 H 0.152 0.848 29 H 0.153 0.847 30 H 0.395 0.605 31 H 0.090 0.910 32 H 0.083 0.917 33 H 0.095 0.905 34 H 0.095 0.905 35 H 0.173 0.827 36 H 0.169 0.831 37 H 0.201 0.799 38 H 0.078 0.922 39 H 0.087 0.913 40 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.006 1.447 5.032 5.235 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.166 4.166 3 Si 0.621 3.379 4 C -0.095 4.095 5 C -0.224 4.224 6 C -0.123 4.123 7 C -0.167 4.167 8 C 0.380 3.620 9 O -0.397 6.397 10 N -0.374 5.374 11 C 0.022 3.978 12 H 0.139 0.861 13 C -0.176 4.176 14 C -0.145 4.145 15 H 0.122 0.878 16 C -0.006 4.006 17 N -0.141 5.141 18 C -0.191 4.191 19 C -0.177 4.177 20 N -0.213 5.213 21 C -0.099 4.099 22 C -0.186 4.186 23 N -0.120 5.120 24 H 0.232 0.768 25 H 0.133 0.867 26 H -0.178 1.178 27 H -0.177 1.177 28 H 0.169 0.831 29 H 0.171 0.829 30 H 0.229 0.771 31 H 0.109 0.891 32 H 0.102 0.898 33 H 0.113 0.887 34 H 0.113 0.887 35 H 0.190 0.810 36 H 0.186 0.814 37 H 0.218 0.782 38 H 0.097 0.903 39 H 0.106 0.894 40 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 0.403 1.714 4.824 5.136 hybrid contribution 0.207 -1.209 1.458 1.905 sum 0.610 0.505 6.282 6.332 Atomic orbital electron populations 1.86496 1.17008 1.81759 1.49693 1.24972 0.85206 1.11085 0.95295 0.93976 0.81100 0.75901 0.86898 1.21160 1.03646 0.85182 0.99550 1.20731 1.05207 1.00656 0.95845 1.21353 1.00245 0.90535 1.00128 1.20448 1.08161 0.96717 0.91371 1.17095 0.78518 0.82045 0.84389 1.90880 1.44095 1.82759 1.21979 1.45854 1.53459 1.11713 1.26333 1.22515 0.99175 0.81140 0.94961 0.86141 1.23367 1.00289 0.96590 0.97331 1.22786 0.95851 0.96579 0.99274 0.87807 1.21896 0.92482 0.99287 0.86939 1.45565 1.31140 1.11394 1.26032 1.22760 1.06641 0.88295 1.01360 1.22364 0.98031 0.97420 0.99871 1.70321 1.26451 1.02051 1.22502 1.24988 0.92897 1.00190 0.91847 1.23609 0.98029 0.94639 1.02307 1.41924 1.39965 1.11217 1.18906 0.76827 0.86749 1.17810 1.17676 0.83098 0.82910 0.77147 0.89141 0.89807 0.88688 0.88670 0.80960 0.81354 0.78231 0.90274 0.89407 0.74680 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.18 12.88 -35.23 -0.45 0.73 16 2 C -0.06 0.13 3.08 36.00 0.11 0.24 16 3 Si 0.72 -2.01 30.54 -169.99 -5.19 -7.20 16 4 C 0.02 -0.03 6.47 -81.95 -0.53 -0.56 16 5 C -0.20 0.14 9.32 -39.98 -0.37 -0.24 16 6 C -0.10 -0.10 10.65 -39.12 -0.42 -0.52 16 7 C -0.05 -0.03 7.06 -81.98 -0.58 -0.61 16 8 C 0.59 0.96 7.79 -12.85 -0.10 0.86 16 9 O -0.52 -2.94 16.48 5.20 0.09 -2.86 16 10 N -0.72 1.43 5.36 -54.24 -0.29 1.14 16 11 C 0.13 -0.27 4.24 -67.03 -0.28 -0.56 16 12 H 0.12 0.00 7.46 -51.93 -0.39 -0.38 16 13 C -0.14 0.63 7.40 -25.92 -0.19 0.44 16 14 C -0.13 0.48 3.96 -89.81 -0.36 0.12 16 15 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 16 C 0.12 -0.46 5.97 -4.04 -0.02 -0.49 16 17 N -0.46 0.28 2.75 -118.58 -0.33 -0.05 16 18 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 19 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 20 N -0.50 -2.23 11.25 -14.66 -0.16 -2.39 16 21 C 0.18 0.24 12.56 -90.37 -1.14 -0.90 16 22 C -0.15 0.40 7.45 -25.82 -0.19 0.21 16 23 N -0.52 0.93 5.99 -5.70 -0.03 0.90 16 24 H 0.38 -2.13 8.70 45.56 0.40 -1.74 16 25 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 26 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 27 H -0.25 0.05 7.11 56.52 0.40 0.45 16 28 H 0.15 -0.39 6.17 -52.48 -0.32 -0.71 16 29 H 0.15 0.14 8.06 -52.48 -0.42 -0.28 16 30 H 0.39 -1.87 7.86 -40.82 -0.32 -2.19 16 31 H 0.09 -0.55 8.08 -51.93 -0.42 -0.97 16 32 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 33 H 0.09 -0.50 7.88 -51.93 -0.41 -0.91 16 34 H 0.09 -0.47 8.14 -51.93 -0.42 -0.89 16 35 H 0.17 -0.42 8.06 -52.49 -0.42 -0.84 16 36 H 0.17 0.14 8.06 -52.49 -0.42 -0.28 16 37 H 0.20 -0.34 8.06 -52.49 -0.42 -0.76 16 38 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.09 -0.32 7.92 -51.93 -0.41 -0.73 16 40 H 0.42 -1.74 8.19 -40.82 -0.33 -2.07 16 LS Contribution 343.87 15.07 5.18 5.18 Total: 0.00 -10.84 343.87 -10.87 -21.71 By element: Atomic # 1 Polarization: -9.46 SS G_CDS: -5.20 Total: -14.66 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -4.47 Total: -2.50 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -0.82 Total: -0.40 kcal Atomic # 8 Polarization: -1.76 SS G_CDS: -0.37 Total: -2.13 kcal Atomic # 14 Polarization: -2.01 SS G_CDS: -5.19 Total: -7.20 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -10.84 -10.87 -21.71 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.743 kcal (2) G-P(sol) polarization free energy of solvation -10.840 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.710 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.033 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds