Wall clock time and date at job start Tue Mar 9 2021 13:09:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.47189 * 2 1 4 4 C 1.50696 * 109.47039 * 120.00115 * 2 1 3 5 5 C 1.34240 * 126.49974 * 255.26848 * 4 2 1 6 6 N 1.36827 * 109.93961 * 180.20751 * 5 4 2 7 7 C 1.46501 * 125.06579 * 179.81851 * 6 5 4 8 8 C 1.50706 * 109.46890 * 264.69375 * 7 6 5 9 9 O 1.21276 * 120.00035 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99728 * 179.97438 * 8 7 6 11 11 C 1.46499 * 120.00107 * 179.97438 * 10 8 7 12 12 H 1.09005 * 112.84663 * 23.81094 * 11 10 8 13 13 C 1.53776 * 113.61670 * 155.00187 * 11 10 8 14 14 C 1.53785 * 87.08312 * 140.06872 * 13 11 10 15 15 H 1.09001 * 113.61359 * 89.20207 * 14 13 11 16 16 C 1.52999 * 113.61627 * 220.01977 * 14 13 11 17 17 N 1.46496 * 109.47130 * 184.99822 * 16 14 13 18 18 C 1.36880 * 126.39785 * 89.99667 * 17 16 14 19 19 C 1.34674 * 106.82015 * 179.73791 * 18 17 16 20 20 N 1.34130 * 108.01710 * 0.23538 * 19 18 17 21 21 C 1.30496 * 109.26014 * 359.97438 * 20 19 18 22 22 C 1.53785 * 87.07997 * 334.56889 * 14 13 11 23 23 C 1.37695 * 109.87381 * 359.54990 * 6 5 4 24 24 C 1.39086 * 133.51280 * 180.28338 * 23 6 5 25 25 C 1.37795 * 119.77448 * 179.97438 * 24 23 6 26 26 C 1.38787 * 120.66909 * 359.97438 * 25 24 23 27 27 C 1.36666 * 120.52395 * 0.04159 * 26 25 24 28 28 C 1.39587 * 119.76554 * 359.95516 * 27 26 25 29 29 H 0.96706 * 113.99939 * 300.00063 * 1 2 3 30 30 H 1.08999 * 109.47189 * 239.99712 * 2 1 3 31 31 H 1.48505 * 109.99977 * 178.68435 * 3 2 1 32 32 H 1.48501 * 110.00026 * 300.00106 * 3 2 1 33 33 H 1.08002 * 125.03410 * 0.04127 * 5 4 2 34 34 H 1.08996 * 109.47564 * 144.69451 * 7 6 5 35 35 H 1.08996 * 109.47135 * 24.69428 * 7 6 5 36 36 H 0.97002 * 120.00070 * 0.02562 * 10 8 7 37 37 H 1.08998 * 113.61445 * 25.52203 * 13 11 10 38 38 H 1.08998 * 113.61736 * 254.61616 * 13 11 10 39 39 H 1.09003 * 109.46925 * 64.99872 * 16 14 13 40 40 H 1.08997 * 109.47224 * 305.00142 * 16 14 13 41 41 H 1.08002 * 126.59253 * 0.02562 * 18 17 16 42 42 H 1.07997 * 125.99347 * 180.23004 * 19 18 17 43 43 H 1.07999 * 125.65629 * 180.02562 * 21 20 19 44 44 H 1.09000 * 113.61330 * 139.97755 * 22 14 13 45 45 H 1.08993 * 113.61494 * 270.88720 * 22 14 13 46 46 H 1.08000 * 120.11604 * 0.02562 * 24 23 6 47 47 H 1.07995 * 119.66402 * 180.02562 * 25 24 23 48 48 H 1.07995 * 119.73747 * 180.02562 * 26 25 24 49 49 H 1.08000 * 120.11229 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4562 -0.1373 2.3250 6 7 2.8041 -1.0990 3.2340 7 6 3.4097 -0.8405 4.5427 8 6 4.9079 -0.9630 4.4359 9 8 5.4194 -1.2396 3.3716 10 7 5.6794 -0.7653 5.5231 11 6 7.1358 -0.8850 5.4195 12 1 7.5026 -0.7240 4.4057 13 6 7.8975 -0.0795 6.4852 14 6 8.8604 -1.2742 6.5870 15 1 9.6995 -1.2189 5.8935 16 6 9.2937 -1.5919 8.0196 17 7 10.2957 -2.6604 8.0011 18 6 11.6524 -2.5003 7.9154 19 6 12.1925 -3.7338 7.9362 20 7 11.1924 -4.6231 8.0268 21 6 10.0533 -3.9875 8.0634 22 6 7.7008 -2.1508 6.0854 23 6 2.4947 -2.3457 2.7380 24 6 2.6296 -3.6362 3.2390 25 6 2.2148 -4.7107 2.4826 26 6 1.6622 -4.5192 1.2240 27 6 1.5206 -3.2599 0.7123 28 6 1.9341 -2.1570 1.4614 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 3.5347 1.7702 0.0320 32 1 1.5615 2.4679 -1.2085 33 1 2.5872 0.9254 2.4661 34 1 3.0364 -1.5659 5.2655 35 1 3.1499 0.1659 4.8708 36 1 5.2702 -0.5445 6.3745 37 1 7.3218 0.0960 7.3940 38 1 8.3644 0.8258 6.0974 39 1 8.4281 -1.9154 8.5976 40 1 9.7223 -0.6996 8.4759 41 1 12.1873 -1.5644 7.8490 42 1 13.2460 -3.9663 7.8883 43 1 9.0783 -4.4465 8.1356 44 1 8.0089 -2.9176 5.3746 45 1 7.0713 -2.5415 6.8848 46 1 3.0573 -3.7955 4.2178 47 1 2.3200 -5.7119 2.8735 48 1 1.3417 -5.3721 0.6442 49 1 1.0901 -3.1186 -0.2680 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14468608_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:22 Heat of formation + Delta-G solvation = 99.922202 kcal Electronic energy + Delta-G solvation = -31957.386475 eV Core-core repulsion = 27661.043323 eV Total energy + Delta-G solvation = -4296.343152 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.99174 -42.52030 -41.28929 -39.69876 -38.01184 -37.53693 -35.58557 -34.34208 -33.84377 -31.42139 -30.40842 -30.14622 -29.45013 -28.52370 -27.09104 -25.89514 -24.36702 -23.55827 -22.59331 -22.27739 -21.93319 -21.73356 -21.01843 -20.57833 -18.76765 -18.57664 -18.43638 -17.74985 -17.45076 -17.02467 -16.66680 -16.37605 -16.34230 -16.05812 -15.86715 -15.58177 -15.38729 -15.28577 -14.83977 -14.80319 -14.63864 -14.48184 -14.42850 -14.14806 -13.94476 -13.90469 -13.71117 -13.70520 -13.45765 -13.15901 -12.62000 -12.53547 -12.49472 -12.25518 -12.13945 -12.03335 -11.78431 -11.69986 -11.16183 -10.85872 -10.55828 -10.44143 -10.32106 -10.24572 -9.43883 -9.05105 -8.55534 -5.05168 0.25139 0.76619 1.10982 1.29137 1.34930 1.40218 1.63537 1.75056 1.75582 2.04533 2.05217 2.30855 3.01892 3.08862 3.12533 3.32712 3.35458 3.41957 3.50012 3.62372 3.72327 3.73458 3.75731 3.81491 3.82943 3.87063 3.94209 4.04168 4.06284 4.27282 4.29254 4.34089 4.39845 4.45134 4.54733 4.55692 4.60953 4.69140 4.71529 4.76979 4.79261 4.87809 4.89691 4.96323 5.21882 5.23358 5.29471 5.62182 5.78101 5.82446 5.83537 5.87490 6.07759 6.22665 6.26591 6.33439 6.73663 6.91520 7.18169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.068 3.932 6 N -0.467 5.467 7 C 0.092 3.908 8 C 0.491 3.509 9 O -0.512 6.512 10 N -0.719 5.719 11 C 0.126 3.874 12 H 0.117 0.883 13 C -0.135 4.135 14 C -0.126 4.126 15 H 0.103 0.897 16 C 0.117 3.883 17 N -0.459 5.459 18 C -0.058 4.058 19 C -0.029 4.029 20 N -0.495 5.495 21 C 0.183 3.817 22 C -0.147 4.147 23 C 0.109 3.891 24 C -0.128 4.128 25 C -0.096 4.096 26 C -0.145 4.145 27 C -0.066 4.066 28 C -0.087 4.087 29 H 0.376 0.624 30 H 0.111 0.889 31 H -0.256 1.256 32 H -0.254 1.254 33 H 0.171 0.829 34 H 0.118 0.882 35 H 0.124 0.876 36 H 0.403 0.597 37 H 0.092 0.908 38 H 0.082 0.918 39 H 0.095 0.905 40 H 0.095 0.905 41 H 0.173 0.827 42 H 0.169 0.831 43 H 0.201 0.799 44 H 0.076 0.924 45 H 0.089 0.911 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.387 6.579 7.800 10.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.057 4.057 6 N -0.150 5.150 7 C -0.035 4.035 8 C 0.275 3.725 9 O -0.385 6.385 10 N -0.372 5.372 11 C 0.021 3.979 12 H 0.135 0.865 13 C -0.174 4.174 14 C -0.146 4.146 15 H 0.121 0.879 16 C -0.006 4.006 17 N -0.142 5.142 18 C -0.191 4.191 19 C -0.177 4.177 20 N -0.213 5.213 21 C -0.099 4.099 22 C -0.186 4.186 23 C 0.004 3.996 24 C -0.148 4.148 25 C -0.116 4.116 26 C -0.164 4.164 27 C -0.084 4.084 28 C -0.091 4.091 29 H 0.223 0.777 30 H 0.128 0.872 31 H -0.181 1.181 32 H -0.179 1.179 33 H 0.188 0.812 34 H 0.136 0.864 35 H 0.142 0.858 36 H 0.237 0.763 37 H 0.111 0.889 38 H 0.101 0.899 39 H 0.114 0.886 40 H 0.114 0.886 41 H 0.190 0.810 42 H 0.186 0.814 43 H 0.218 0.782 44 H 0.095 0.905 45 H 0.107 0.893 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -1.313 6.014 6.341 8.837 hybrid contribution 0.048 0.384 0.367 0.533 sum -1.265 6.398 6.708 9.356 Atomic orbital electron populations 1.86506 1.17505 1.81758 1.48904 1.24332 0.84631 1.08752 0.96307 0.95438 0.80939 0.77526 0.87713 1.20641 1.10072 0.92387 0.97353 1.21500 1.01011 0.93809 0.89336 1.43186 1.52525 1.04658 1.14643 1.21591 0.90620 1.05911 0.85335 1.21102 0.89631 0.77271 0.84484 1.90825 1.74638 1.45251 1.27807 1.45925 1.06870 1.72373 1.12020 1.22463 0.78774 0.96150 1.00524 0.86525 1.23362 0.97106 0.97615 0.99344 1.22791 0.97800 0.97506 0.96460 0.87921 1.21899 0.91457 0.90054 0.97168 1.45569 1.06666 1.07785 1.54153 1.22761 0.83024 1.01284 1.11984 1.22367 0.99181 0.88692 1.07431 1.70320 0.98102 1.33602 1.19291 1.24987 0.99686 0.79604 1.05671 1.23577 0.96464 0.97612 1.00930 1.18159 1.01200 0.85849 0.94367 1.19946 1.05032 0.89254 1.00617 1.20832 0.98283 0.97956 0.94485 1.20677 1.02393 0.96946 0.96422 1.20314 0.97975 0.90959 0.99175 1.18943 1.03369 0.92824 0.93950 0.77725 0.87166 1.18095 1.17898 0.81208 0.86417 0.85805 0.76258 0.88908 0.89906 0.88622 0.88646 0.80951 0.81352 0.78230 0.90505 0.89280 0.86781 0.85707 0.85906 0.85962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.78 12.88 -35.23 -0.45 -1.23 16 2 C -0.03 -0.04 3.06 36.00 0.11 0.07 16 3 Si 0.68 -0.27 30.76 -169.99 -5.23 -5.50 16 4 C -0.20 -0.43 5.57 -102.71 -0.57 -1.00 16 5 C 0.07 0.02 9.89 -16.73 -0.17 -0.15 16 6 N -0.47 -0.30 2.27 -115.71 -0.26 -0.56 16 7 C 0.09 -0.31 6.48 -5.19 -0.03 -0.35 16 8 C 0.49 -0.46 7.90 -10.98 -0.09 -0.54 16 9 O -0.51 -2.40 16.02 5.56 0.09 -2.31 16 10 N -0.72 3.01 5.36 -53.02 -0.28 2.72 16 11 C 0.13 -0.40 4.24 -67.12 -0.28 -0.68 16 12 H 0.12 -0.04 7.46 -51.93 -0.39 -0.43 16 13 C -0.14 0.75 7.39 -25.92 -0.19 0.56 16 14 C -0.13 0.55 3.96 -89.80 -0.36 0.19 16 15 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 16 C 0.12 -0.53 5.99 -4.04 -0.02 -0.55 16 17 N -0.46 0.43 2.75 -118.58 -0.33 0.10 16 18 C -0.06 0.00 11.58 -16.56 -0.19 -0.20 16 19 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 20 N -0.50 -2.13 11.25 -14.66 -0.16 -2.30 16 21 C 0.18 0.18 12.56 -90.37 -1.14 -0.95 16 22 C -0.15 0.51 7.43 -25.91 -0.19 0.31 16 23 C 0.11 0.34 6.80 -83.99 -0.57 -0.23 16 24 C -0.13 -0.30 10.00 -39.43 -0.39 -0.70 16 25 C -0.10 -0.21 10.01 -39.54 -0.40 -0.61 16 26 C -0.15 -0.39 9.97 -39.95 -0.40 -0.79 16 27 C -0.07 -0.25 10.05 -39.65 -0.40 -0.65 16 28 C -0.09 -0.36 6.35 -105.14 -0.67 -1.03 16 29 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 30 H 0.11 0.27 7.96 -51.93 -0.41 -0.15 16 31 H -0.26 -0.69 7.11 56.52 0.40 -0.28 16 32 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 33 H 0.17 -0.58 6.35 -52.49 -0.33 -0.92 16 34 H 0.12 -0.65 8.14 -51.93 -0.42 -1.07 16 35 H 0.12 -0.87 8.12 -51.93 -0.42 -1.29 16 36 H 0.40 -3.04 8.73 -40.82 -0.36 -3.40 16 37 H 0.09 -0.67 8.08 -51.93 -0.42 -1.09 16 38 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 39 H 0.10 -0.57 7.84 -51.93 -0.41 -0.98 16 40 H 0.10 -0.52 8.14 -51.93 -0.42 -0.95 16 41 H 0.17 -0.46 8.06 -52.49 -0.42 -0.89 16 42 H 0.17 0.12 8.06 -52.49 -0.42 -0.30 16 43 H 0.20 -0.41 8.06 -52.49 -0.42 -0.83 16 44 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.09 -0.41 7.90 -51.93 -0.41 -0.82 16 46 H 0.11 0.04 8.06 -52.49 -0.42 -0.39 16 47 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 48 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 49 H 0.12 0.36 8.06 -52.49 -0.42 -0.07 16 LS Contribution 414.87 15.07 6.25 6.25 Total: 0.00 -14.42 414.87 -13.56 -27.98 By element: Atomic # 1 Polarization: -10.57 SS G_CDS: -7.02 Total: -17.60 kcal Atomic # 6 Polarization: -1.41 SS G_CDS: -6.16 Total: -7.57 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -1.04 Total: -0.03 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -0.36 Total: -3.54 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.23 Total: -5.50 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -14.42 -13.56 -27.98 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 127.906 kcal (2) G-P(sol) polarization free energy of solvation -14.419 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.565 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.984 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds