Wall clock time and date at job start Tue Mar 9 2021 13:09:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.47189 * 2 1 4 4 C 1.50696 * 109.47039 * 120.00115 * 2 1 3 5 5 C 1.34240 * 126.49974 * 255.26848 * 4 2 1 6 6 N 1.36827 * 109.93961 * 180.20751 * 5 4 2 7 7 C 1.46501 * 125.06579 * 179.81851 * 6 5 4 8 8 C 1.50706 * 109.46890 * 264.69375 * 7 6 5 9 9 O 1.21276 * 120.00035 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99728 * 179.97438 * 8 7 6 11 11 C 1.46499 * 120.00107 * 179.97438 * 10 8 7 12 12 H 1.09005 * 112.84663 * 23.81094 * 11 10 8 13 13 C 1.53776 * 113.61670 * 155.00187 * 11 10 8 14 14 C 1.53785 * 87.08312 * 140.06872 * 13 11 10 15 15 H 1.09001 * 113.61359 * 89.20207 * 14 13 11 16 16 C 1.52999 * 113.61627 * 220.01977 * 14 13 11 17 17 N 1.46496 * 109.47130 * 184.99822 * 16 14 13 18 18 C 1.36880 * 126.39785 * 89.99667 * 17 16 14 19 19 C 1.34674 * 106.82015 * 179.73791 * 18 17 16 20 20 N 1.34130 * 108.01710 * 0.23538 * 19 18 17 21 21 C 1.30496 * 109.26014 * 359.97438 * 20 19 18 22 22 C 1.53785 * 87.07997 * 334.56889 * 14 13 11 23 23 C 1.37695 * 109.87381 * 359.54990 * 6 5 4 24 24 C 1.39086 * 133.51280 * 180.28338 * 23 6 5 25 25 C 1.37795 * 119.77448 * 179.97438 * 24 23 6 26 26 C 1.38787 * 120.66909 * 359.97438 * 25 24 23 27 27 C 1.36666 * 120.52395 * 0.04159 * 26 25 24 28 28 C 1.39587 * 119.76554 * 359.95516 * 27 26 25 29 29 H 0.96706 * 113.99939 * 300.00063 * 1 2 3 30 30 H 1.08999 * 109.47189 * 239.99712 * 2 1 3 31 31 H 1.48505 * 109.99977 * 178.68435 * 3 2 1 32 32 H 1.48501 * 110.00026 * 300.00106 * 3 2 1 33 33 H 1.08002 * 125.03410 * 0.04127 * 5 4 2 34 34 H 1.08996 * 109.47564 * 144.69451 * 7 6 5 35 35 H 1.08996 * 109.47135 * 24.69428 * 7 6 5 36 36 H 0.97002 * 120.00070 * 0.02562 * 10 8 7 37 37 H 1.08998 * 113.61445 * 25.52203 * 13 11 10 38 38 H 1.08998 * 113.61736 * 254.61616 * 13 11 10 39 39 H 1.09003 * 109.46925 * 64.99872 * 16 14 13 40 40 H 1.08997 * 109.47224 * 305.00142 * 16 14 13 41 41 H 1.08002 * 126.59253 * 0.02562 * 18 17 16 42 42 H 1.07997 * 125.99347 * 180.23004 * 19 18 17 43 43 H 1.07999 * 125.65629 * 180.02562 * 21 20 19 44 44 H 1.09000 * 113.61330 * 139.97755 * 22 14 13 45 45 H 1.08993 * 113.61494 * 270.88720 * 22 14 13 46 46 H 1.08000 * 120.11604 * 0.02562 * 24 23 6 47 47 H 1.07995 * 119.66402 * 180.02562 * 25 24 23 48 48 H 1.07995 * 119.73747 * 180.02562 * 26 25 24 49 49 H 1.08000 * 120.11229 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4562 -0.1373 2.3250 6 7 2.8041 -1.0990 3.2340 7 6 3.4097 -0.8405 4.5427 8 6 4.9079 -0.9630 4.4359 9 8 5.4194 -1.2396 3.3716 10 7 5.6794 -0.7653 5.5231 11 6 7.1358 -0.8850 5.4195 12 1 7.5026 -0.7240 4.4057 13 6 7.8975 -0.0795 6.4852 14 6 8.8604 -1.2742 6.5870 15 1 9.6995 -1.2189 5.8935 16 6 9.2937 -1.5919 8.0196 17 7 10.2957 -2.6604 8.0011 18 6 11.6524 -2.5003 7.9154 19 6 12.1925 -3.7338 7.9362 20 7 11.1924 -4.6231 8.0268 21 6 10.0533 -3.9875 8.0634 22 6 7.7008 -2.1508 6.0854 23 6 2.4947 -2.3457 2.7380 24 6 2.6296 -3.6362 3.2390 25 6 2.2148 -4.7107 2.4826 26 6 1.6622 -4.5192 1.2240 27 6 1.5206 -3.2599 0.7123 28 6 1.9341 -2.1570 1.4614 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 3.5347 1.7702 0.0320 32 1 1.5615 2.4679 -1.2085 33 1 2.5872 0.9254 2.4661 34 1 3.0364 -1.5659 5.2655 35 1 3.1499 0.1659 4.8708 36 1 5.2702 -0.5445 6.3745 37 1 7.3218 0.0960 7.3940 38 1 8.3644 0.8258 6.0974 39 1 8.4281 -1.9154 8.5976 40 1 9.7223 -0.6996 8.4759 41 1 12.1873 -1.5644 7.8490 42 1 13.2460 -3.9663 7.8883 43 1 9.0783 -4.4465 8.1356 44 1 8.0089 -2.9176 5.3746 45 1 7.0713 -2.5415 6.8848 46 1 3.0573 -3.7955 4.2178 47 1 2.3200 -5.7119 2.8735 48 1 1.3417 -5.3721 0.6442 49 1 1.0901 -3.1186 -0.2680 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14468608_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:22 Heat of formation + Delta-G solvation = 98.159889 kcal Electronic energy + Delta-G solvation = -31957.462895 eV Core-core repulsion = 27661.043323 eV Total energy + Delta-G solvation = -4296.419572 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.95717 -42.53786 -41.11853 -39.55397 -38.10469 -37.59502 -35.45696 -34.28076 -33.78651 -31.47345 -30.41137 -30.24658 -29.36553 -28.37600 -26.74644 -25.89850 -24.24358 -23.61542 -22.64730 -22.28200 -21.86680 -21.60265 -20.81476 -20.55456 -18.67665 -18.41145 -18.39081 -17.74262 -17.37005 -16.92983 -16.47941 -16.42877 -16.25772 -16.01342 -15.88628 -15.47626 -15.39477 -15.24600 -14.87039 -14.84236 -14.72388 -14.44340 -14.32771 -14.11769 -14.05924 -13.66846 -13.52192 -13.43369 -13.23428 -12.91596 -12.73106 -12.60077 -12.29263 -12.26410 -12.13262 -11.98977 -11.83629 -11.51565 -11.12771 -10.91882 -10.58137 -10.48569 -10.32008 -10.11194 -9.45842 -9.17227 -8.63517 -5.07007 0.12594 0.61406 1.14073 1.33181 1.42853 1.45279 1.63717 1.75030 1.92453 1.99120 2.21902 2.24846 2.92820 3.35982 3.45878 3.57599 3.63955 3.67077 3.70004 3.72654 3.80132 3.87452 3.87596 4.04304 4.06879 4.10815 4.17281 4.19176 4.20111 4.28739 4.41740 4.46869 4.54451 4.59750 4.69196 4.70070 4.71341 4.76727 4.77375 4.80219 4.86850 4.93585 5.01688 5.11533 5.16941 5.34531 5.48427 5.52127 5.63935 5.71346 5.73703 5.81841 6.19092 6.23270 6.31757 6.50350 6.88467 7.15602 7.16999 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.042 4.042 3 Si 0.805 3.195 4 C -0.227 4.227 5 C 0.081 3.919 6 N -0.466 5.466 7 C 0.088 3.912 8 C 0.489 3.511 9 O -0.579 6.579 10 N -0.698 5.698 11 C 0.117 3.883 12 H 0.080 0.920 13 C -0.113 4.113 14 C -0.120 4.120 15 H 0.081 0.919 16 C 0.115 3.885 17 N -0.453 5.453 18 C -0.049 4.049 19 C -0.068 4.068 20 N -0.548 5.548 21 C 0.176 3.824 22 C -0.145 4.145 23 C 0.091 3.909 24 C -0.132 4.132 25 C -0.110 4.110 26 C -0.155 4.155 27 C -0.092 4.092 28 C -0.118 4.118 29 H 0.394 0.606 30 H 0.086 0.914 31 H -0.295 1.295 32 H -0.299 1.299 33 H 0.210 0.790 34 H 0.145 0.855 35 H 0.171 0.829 36 H 0.424 0.576 37 H 0.125 0.875 38 H 0.083 0.917 39 H 0.120 0.880 40 H 0.115 0.885 41 H 0.200 0.800 42 H 0.170 0.830 43 H 0.224 0.776 44 H 0.043 0.957 45 H 0.110 0.890 46 H 0.135 0.865 47 H 0.145 0.855 48 H 0.135 0.865 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.281 8.953 11.124 14.651 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.152 4.152 3 Si 0.710 3.290 4 C -0.235 4.235 5 C -0.044 4.044 6 N -0.149 5.149 7 C -0.037 4.037 8 C 0.275 3.725 9 O -0.458 6.458 10 N -0.351 5.351 11 C 0.011 3.989 12 H 0.098 0.902 13 C -0.151 4.151 14 C -0.140 4.140 15 H 0.099 0.901 16 C -0.006 4.006 17 N -0.135 5.135 18 C -0.182 4.182 19 C -0.215 4.215 20 N -0.267 5.267 21 C -0.107 4.107 22 C -0.184 4.184 23 C -0.015 4.015 24 C -0.153 4.153 25 C -0.129 4.129 26 C -0.174 4.174 27 C -0.111 4.111 28 C -0.123 4.123 29 H 0.243 0.757 30 H 0.104 0.896 31 H -0.223 1.223 32 H -0.226 1.226 33 H 0.226 0.774 34 H 0.162 0.838 35 H 0.188 0.812 36 H 0.263 0.737 37 H 0.143 0.857 38 H 0.101 0.899 39 H 0.138 0.862 40 H 0.133 0.867 41 H 0.217 0.783 42 H 0.188 0.812 43 H 0.241 0.759 44 H 0.062 0.938 45 H 0.129 0.871 46 H 0.152 0.848 47 H 0.163 0.837 48 H 0.152 0.848 49 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -2.242 8.393 9.760 13.066 hybrid contribution 0.352 -0.369 -0.695 0.862 sum -1.891 8.024 9.065 12.253 Atomic orbital electron populations 1.86455 1.17748 1.82399 1.50218 1.24594 0.84724 1.10489 0.95356 0.94143 0.76526 0.73366 0.84921 1.20795 1.12157 0.91861 0.98643 1.22080 0.98636 0.95375 0.88338 1.43454 1.51793 1.03680 1.15944 1.22048 0.88345 1.09444 0.83832 1.21588 0.90837 0.76073 0.84011 1.90816 1.75923 1.48605 1.30406 1.45754 1.06288 1.70746 1.12287 1.22362 0.79531 0.97423 0.99586 0.90218 1.23289 0.95940 0.96521 0.99347 1.22652 0.97023 0.98021 0.96271 0.90076 1.22210 0.91568 0.89748 0.97096 1.45770 1.06945 1.07992 1.52817 1.23149 0.83643 1.01412 1.10026 1.22634 0.99491 0.89804 1.09573 1.70233 0.99648 1.35536 1.21315 1.25415 0.99792 0.80492 1.04991 1.23588 0.97310 0.96714 1.00764 1.18381 1.01506 0.87162 0.94410 1.20250 1.04482 0.89087 1.01438 1.21128 0.98319 0.99094 0.94349 1.20908 1.02421 0.96965 0.97059 1.20443 0.99355 0.91882 0.99383 1.19378 1.03994 0.93951 0.94929 0.75667 0.89620 1.22292 1.22638 0.77371 0.83751 0.81191 0.73703 0.85693 0.89880 0.86160 0.86716 0.78295 0.81225 0.75949 0.93837 0.87145 0.84765 0.83748 0.84760 0.86685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.28 12.88 -148.98 -1.92 -4.20 16 2 C -0.04 -0.18 3.06 71.23 0.22 0.04 16 3 Si 0.80 -0.62 30.76 68.60 2.11 1.49 16 4 C -0.23 -1.25 5.57 -18.63 -0.10 -1.35 16 5 C 0.08 -0.03 9.89 83.00 0.82 0.79 16 6 N -0.47 -0.13 2.27 -520.00 -1.18 -1.31 16 7 C 0.09 -0.85 6.48 85.63 0.56 -0.29 16 8 C 0.49 -1.50 7.90 87.66 0.69 -0.80 16 9 O -0.58 -6.05 16.02 -3.02 -0.05 -6.09 16 10 N -0.70 7.33 5.36 -440.04 -2.36 4.98 16 11 C 0.12 -0.82 4.24 45.52 0.19 -0.62 16 12 H 0.08 0.09 7.46 -2.38 -0.02 0.07 16 13 C -0.11 1.54 7.39 31.12 0.23 1.77 16 14 C -0.12 1.20 3.96 -10.26 -0.04 1.16 16 15 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 16 C 0.11 -1.35 5.99 86.38 0.52 -0.83 16 17 N -0.45 1.30 2.75 -529.07 -1.46 -0.15 16 18 C -0.05 0.01 11.58 83.09 0.96 0.97 16 19 C -0.07 -0.43 11.87 83.52 0.99 0.56 16 20 N -0.55 -5.49 11.25 -200.30 -2.25 -7.74 16 21 C 0.18 0.36 12.56 180.26 2.26 2.62 16 22 C -0.15 1.09 7.43 31.12 0.23 1.32 16 23 C 0.09 0.63 6.80 39.03 0.27 0.89 16 24 C -0.13 -0.68 10.00 22.37 0.22 -0.46 16 25 C -0.11 -0.60 10.01 22.30 0.22 -0.37 16 26 C -0.15 -1.17 9.97 22.03 0.22 -0.95 16 27 C -0.09 -0.97 10.05 22.23 0.22 -0.75 16 28 C -0.12 -1.22 6.35 -20.20 -0.13 -1.34 16 29 H 0.39 -2.09 8.70 -74.05 -0.64 -2.74 16 30 H 0.09 0.70 7.96 -2.39 -0.02 0.68 16 31 H -0.30 -1.69 7.11 99.48 0.71 -0.98 16 32 H -0.30 -1.92 7.11 99.48 0.71 -1.21 16 33 H 0.21 -2.00 6.35 -2.91 -0.02 -2.02 16 34 H 0.14 -2.13 8.14 -2.39 -0.02 -2.15 16 35 H 0.17 -3.23 8.12 -2.39 -0.02 -3.25 16 36 H 0.42 -8.13 8.73 -92.71 -0.81 -8.94 16 37 H 0.12 -2.45 8.08 -2.39 -0.02 -2.47 16 38 H 0.08 -1.05 8.14 -2.39 -0.02 -1.07 16 39 H 0.12 -1.93 7.84 -2.39 -0.02 -1.95 16 40 H 0.11 -1.70 8.14 -2.39 -0.02 -1.71 16 41 H 0.20 -1.33 8.06 -2.91 -0.02 -1.36 16 42 H 0.17 0.62 8.06 -2.91 -0.02 0.59 16 43 H 0.22 -1.05 8.06 -2.91 -0.02 -1.07 16 44 H 0.04 -0.01 8.14 -2.39 -0.02 -0.03 16 45 H 0.11 -1.31 7.90 -2.39 -0.02 -1.33 16 46 H 0.13 -0.02 8.06 -2.91 -0.02 -0.05 16 47 H 0.14 0.05 8.06 -2.91 -0.02 0.02 16 48 H 0.13 0.49 8.06 -2.91 -0.02 0.47 16 49 H 0.12 1.15 8.06 -2.91 -0.02 1.13 16 Total: 0.00 -41.50 414.87 1.02 -40.47 By element: Atomic # 1 Polarization: -29.38 SS G_CDS: -0.43 Total: -29.81 kcal Atomic # 6 Polarization: -6.20 SS G_CDS: 8.56 Total: 2.36 kcal Atomic # 7 Polarization: 3.02 SS G_CDS: -7.25 Total: -4.22 kcal Atomic # 8 Polarization: -8.33 SS G_CDS: -1.97 Total: -10.30 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: 2.11 Total: 1.49 kcal Total: -41.50 1.02 -40.47 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 138.634 kcal (2) G-P(sol) polarization free energy of solvation -41.497 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.474 kcal (6) G-S(sol) free energy of system = (1) + (5) 98.160 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds