Wall clock time and date at job start Tue Mar 9 2021 13:09:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52999 * 109.47159 * 2 1 4 4 C 1.53000 * 109.47284 * 240.00193 * 2 1 3 5 5 O 1.45194 * 109.47039 * 120.00091 * 2 1 3 6 6 C 1.34638 * 117.00320 * 60.00284 * 5 2 1 7 7 O 1.21516 * 119.99375 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00641 * 179.97438 * 6 5 2 9 9 C 1.46496 * 120.00099 * 179.97438 * 8 6 5 10 10 H 1.08994 * 112.91109 * 23.75176 * 9 8 6 11 11 C 1.53787 * 113.61210 * 155.00440 * 9 8 6 12 12 C 1.53779 * 87.07963 * 139.97940 * 11 9 8 13 13 H 1.09006 * 113.61280 * 89.11401 * 12 11 9 14 14 C 1.50696 * 113.61244 * 219.93051 * 12 11 9 15 15 O 1.21286 * 120.00240 * 0.02562 * 14 12 11 16 16 N 1.34778 * 120.00248 * 180.02562 * 14 12 11 17 17 N 1.40099 * 120.00061 * 180.02562 * 16 14 12 18 18 C 1.34778 * 119.99738 * 179.97438 * 17 16 14 19 19 O 1.21576 * 120.00325 * 359.97438 * 18 17 16 20 20 C 1.47695 * 119.99760 * 179.97438 * 18 17 16 21 21 C 1.39831 * 120.16494 * 179.97438 * 20 18 17 22 22 F 1.35106 * 120.10876 * 359.96047 * 21 20 18 23 23 C 1.38317 * 119.78095 * 179.97438 * 21 20 18 24 24 C 1.38204 * 120.11353 * 0.02562 * 23 21 20 25 25 C 1.38453 * 120.34417 * 359.96215 * 24 23 21 26 26 C 1.50697 * 119.89519 * 179.97438 * 25 24 23 27 27 O 1.42900 * 109.47511 * 244.99890 * 26 25 24 28 28 Si 1.86303 * 109.46904 * 5.00179 * 26 25 24 29 29 C 1.37868 * 120.21578 * 359.78233 * 25 24 23 30 30 C 1.53779 * 87.08402 * 334.56577 * 12 11 9 31 31 H 1.08996 * 109.47601 * 299.99573 * 1 2 3 32 32 H 1.09008 * 109.47003 * 59.99972 * 1 2 3 33 33 H 1.09001 * 109.47089 * 179.97438 * 1 2 3 34 34 H 1.08998 * 109.47346 * 179.97438 * 3 2 1 35 35 H 1.09003 * 109.47568 * 300.00538 * 3 2 1 36 36 H 1.09002 * 109.46886 * 59.99891 * 3 2 1 37 37 H 1.09001 * 109.47166 * 300.00086 * 4 2 1 38 38 H 1.09008 * 109.47235 * 59.99977 * 4 2 1 39 39 H 1.09005 * 109.47250 * 179.97438 * 4 2 1 40 40 H 0.97002 * 119.99411 * 0.02562 * 8 6 5 41 41 H 1.08997 * 113.61028 * 254.52900 * 11 9 8 42 42 H 1.09000 * 113.61529 * 25.43039 * 11 9 8 43 43 H 0.97002 * 119.99816 * 0.02562 * 16 14 12 44 44 H 0.96992 * 120.00664 * 359.97438 * 17 16 14 45 45 H 1.08002 * 119.94308 * 180.02562 * 23 21 20 46 46 H 1.08003 * 119.82796 * 179.97438 * 24 23 21 47 47 H 1.09000 * 109.47269 * 125.00148 * 26 25 24 48 48 H 0.96701 * 113.99557 * 60.00125 * 27 26 25 49 49 H 1.48501 * 110.00068 * 179.97438 * 28 26 25 50 50 H 1.48498 * 109.99966 * 301.31467 * 28 26 25 51 51 H 1.07996 * 120.05793 * 180.25770 * 29 25 24 52 52 H 1.09002 * 113.61557 * 270.88569 * 30 12 11 53 53 H 1.09004 * 113.61501 * 139.97990 * 30 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9509 -2.5094 0.5039 8 7 2.0680 -2.6658 2.4165 9 6 1.6739 -4.0669 2.5829 10 1 1.4197 -4.5511 1.6401 11 6 2.6474 -4.8817 3.4510 12 6 1.4101 -5.5543 4.0685 13 1 1.0837 -6.4451 3.5317 14 6 1.5218 -5.7750 5.5551 15 8 2.5229 -5.4292 6.1460 16 7 0.5091 -6.3566 6.2280 17 7 0.6128 -6.5612 7.6101 18 6 -0.4001 -7.1423 8.2831 19 8 -1.4039 -7.4885 7.6909 20 6 -0.2906 -7.3586 9.7400 21 6 -1.3395 -7.9607 10.4418 22 9 -2.4580 -8.3464 9.7894 23 6 -1.2283 -8.1599 11.8060 24 6 -0.0845 -7.7647 12.4735 25 6 0.9572 -7.1683 11.7835 26 6 2.1996 -6.7408 12.5215 27 8 2.3204 -5.3179 12.4667 28 14 2.0845 -7.2863 14.2992 29 6 0.8633 -6.9678 10.4227 30 6 0.6283 -4.2855 3.6892 31 1 -0.3634 0.5137 0.8900 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3633 -1.0277 -0.0005 34 1 3.1300 1.4425 0.0005 35 1 1.6766 1.9564 -0.8899 36 1 1.6766 1.9563 0.8900 37 1 1.6767 -1.7489 -1.2493 38 1 1.6767 -0.2073 -2.1393 39 1 3.1301 -0.7208 -1.2495 40 1 2.6276 -2.2369 3.0828 41 1 3.2757 -5.5644 2.8790 42 1 3.2137 -4.2757 4.1583 43 1 -0.2914 -6.6334 5.7554 44 1 1.4134 -6.2847 8.0827 45 1 -2.0367 -8.6251 12.3505 46 1 -0.0027 -7.9221 13.5388 47 1 3.0735 -7.1977 12.0571 48 1 1.5761 -4.8445 12.8629 49 1 3.3041 -6.8712 15.0378 50 1 0.8795 -6.6954 14.9347 51 1 1.6791 -6.5062 9.8863 52 1 0.6426 -3.5165 4.4617 53 1 -0.3734 -4.4870 3.3096 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14472184_12335834.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:55 Heat of formation + Delta-G solvation = -135.059777 kcal Electronic energy + Delta-G solvation = -38401.604514 eV Core-core repulsion = 32964.137940 eV Total energy + Delta-G solvation = -5437.466574 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.178 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -50.06613 -42.13955 -41.76754 -41.12358 -40.11321 -39.25704 -37.80562 -37.63246 -36.60918 -35.38889 -34.20948 -33.66671 -32.41589 -31.66041 -28.37737 -28.31976 -27.47241 -26.81121 -26.68121 -25.53777 -24.02138 -23.21354 -22.66209 -21.82668 -21.36476 -20.57376 -19.58088 -19.24629 -18.99654 -18.64674 -18.36368 -18.03603 -17.46368 -17.21331 -17.18027 -17.07076 -16.71496 -16.58310 -16.23800 -16.19786 -16.08421 -15.75772 -15.68837 -15.48780 -15.28939 -15.01715 -14.83350 -14.64286 -14.44603 -14.39682 -13.84704 -13.61354 -13.56825 -13.38691 -13.29936 -13.12095 -12.93999 -12.93273 -12.88204 -12.66697 -12.59255 -12.48400 -12.36062 -12.30530 -12.21702 -11.81579 -11.74787 -11.61494 -11.40866 -11.17812 -11.11708 -10.66435 -10.44542 -10.20967 -9.94074 -9.62687 -4.88803 -0.61694 -0.09070 0.52433 1.12098 1.18629 1.29632 1.52996 1.61767 1.71222 2.01452 2.36731 2.65947 2.96016 3.07578 3.17904 3.28465 3.33144 3.36632 3.49182 3.55186 3.64405 3.72573 3.72973 3.78591 3.93011 3.93397 3.98670 4.02465 4.40443 4.40646 4.55043 4.55795 4.58660 4.60116 4.65698 4.72278 4.73088 4.74222 4.75248 4.82925 4.84288 4.86139 4.89162 4.94981 4.99118 5.08811 5.13730 5.25977 5.28698 5.32735 5.42121 5.46926 5.54992 5.56669 6.22536 6.35913 6.48941 6.58004 7.06664 7.30588 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.645 3.355 7 O -0.591 6.591 8 N -0.692 5.692 9 C 0.140 3.860 10 H 0.123 0.877 11 C -0.114 4.114 12 C -0.115 4.115 13 H 0.156 0.844 14 C 0.530 3.470 15 O -0.565 6.565 16 N -0.517 5.517 17 N -0.515 5.515 18 C 0.560 3.440 19 O -0.558 6.558 20 C -0.181 4.181 21 C 0.145 3.855 22 F -0.132 7.132 23 C -0.147 4.147 24 C -0.046 4.046 25 C -0.129 4.129 26 C -0.082 4.082 27 O -0.546 6.546 28 Si 0.768 3.232 29 C -0.027 4.027 30 C -0.134 4.134 31 H 0.060 0.940 32 H 0.086 0.914 33 H 0.065 0.935 34 H 0.069 0.931 35 H 0.098 0.902 36 H 0.068 0.932 37 H 0.065 0.935 38 H 0.086 0.914 39 H 0.061 0.939 40 H 0.416 0.584 41 H 0.100 0.900 42 H 0.097 0.903 43 H 0.439 0.561 44 H 0.437 0.563 45 H 0.173 0.827 46 H 0.170 0.830 47 H 0.134 0.866 48 H 0.388 0.612 49 H -0.307 1.307 50 H -0.272 1.272 51 H 0.150 0.850 52 H 0.087 0.913 53 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.944 -1.096 3.783 4.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.398 3.602 7 O -0.481 6.481 8 N -0.350 5.350 9 C 0.036 3.964 10 H 0.141 0.859 11 C -0.153 4.153 12 C -0.138 4.138 13 H 0.173 0.827 14 C 0.318 3.682 15 O -0.442 6.442 16 N -0.265 5.265 17 N -0.264 5.264 18 C 0.349 3.651 19 O -0.436 6.436 20 C -0.187 4.187 21 C 0.125 3.875 22 F -0.110 7.110 23 C -0.166 4.166 24 C -0.064 4.064 25 C -0.130 4.130 26 C -0.191 4.191 27 O -0.355 6.355 28 Si 0.673 3.327 29 C -0.046 4.046 30 C -0.173 4.173 31 H 0.079 0.921 32 H 0.105 0.895 33 H 0.084 0.916 34 H 0.088 0.912 35 H 0.117 0.883 36 H 0.087 0.913 37 H 0.084 0.916 38 H 0.105 0.895 39 H 0.080 0.920 40 H 0.252 0.748 41 H 0.119 0.881 42 H 0.115 0.885 43 H 0.283 0.717 44 H 0.282 0.718 45 H 0.190 0.810 46 H 0.187 0.813 47 H 0.151 0.849 48 H 0.238 0.762 49 H -0.236 1.236 50 H -0.198 1.198 51 H 0.167 0.833 52 H 0.106 0.894 53 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 2.097 -1.181 3.791 4.490 hybrid contribution -0.535 1.228 -0.184 1.352 sum 1.561 0.047 3.607 3.930 Atomic orbital electron populations 1.22472 0.93995 1.03793 1.03434 1.22351 0.94483 0.92539 0.81561 1.21896 1.02446 0.91017 1.04192 1.22474 1.01626 1.02333 0.97253 1.86317 1.71552 1.23445 1.47292 1.18391 0.78612 0.80761 0.82411 1.90902 1.42079 1.70868 1.44288 1.44764 1.54934 1.12297 1.23046 1.22547 0.95882 0.78775 0.99160 0.85890 1.23285 0.95733 0.98449 0.97796 1.22579 1.01088 1.01600 0.88537 0.82681 1.21202 0.81127 0.75643 0.90193 1.90741 1.31111 1.51957 1.70381 1.45157 1.22428 1.62766 0.96193 1.44732 1.21395 1.62273 0.97968 1.18345 0.82075 0.77463 0.87240 1.90872 1.30751 1.52109 1.69849 1.19646 0.97767 1.09594 0.91671 1.18077 0.82185 0.95959 0.91300 1.91581 1.49553 1.88082 1.81785 1.21418 1.01301 1.03003 0.90834 1.21466 0.90674 0.92831 1.01425 1.20371 0.97597 1.01210 0.93781 1.25272 0.98068 0.83915 1.11828 1.86620 1.49383 1.16948 1.82531 0.94105 0.76833 0.90311 0.71438 1.21170 0.94793 0.94227 0.94400 1.23501 0.99980 0.95389 0.98477 0.92100 0.89489 0.91577 0.91217 0.88295 0.91317 0.91571 0.89492 0.91972 0.74762 0.88101 0.88483 0.71710 0.71844 0.80962 0.81330 0.84859 0.76208 1.23562 1.19817 0.83290 0.89436 0.88511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.58 8.37 71.98 0.60 0.03 16 2 C 0.13 0.38 1.13 -10.79 -0.01 0.37 16 3 C -0.14 0.23 8.85 71.98 0.64 0.87 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 5 O -0.37 -2.09 9.94 -55.48 -0.55 -2.64 16 6 C 0.64 3.95 8.06 129.79 1.05 4.99 16 7 O -0.59 -6.30 11.48 19.79 0.23 -6.07 16 8 N -0.69 -0.02 5.36 -567.60 -3.04 -3.06 16 9 C 0.14 -0.43 4.24 45.52 0.19 -0.23 16 10 H 0.12 -0.21 7.47 -2.39 -0.02 -0.23 16 11 C -0.11 0.56 7.16 31.12 0.22 0.78 16 12 C -0.12 0.67 4.14 -11.02 -0.05 0.62 16 13 H 0.16 -1.70 8.14 -2.38 -0.02 -1.72 16 14 C 0.53 0.13 7.48 87.66 0.66 0.79 16 15 O -0.57 -3.73 15.74 -3.05 -0.05 -3.78 16 16 N -0.52 -0.23 6.26 -173.53 -1.09 -1.32 16 17 N -0.52 -1.07 6.21 -175.70 -1.09 -2.16 16 18 C 0.56 3.22 7.89 86.74 0.68 3.90 16 19 O -0.56 -7.04 15.18 -3.96 -0.06 -7.10 16 20 C -0.18 -0.33 5.88 -20.05 -0.12 -0.45 16 21 C 0.15 0.37 7.29 22.67 0.17 0.53 16 22 F -0.13 -1.17 15.55 44.97 0.70 -0.47 16 23 C -0.15 0.68 10.01 22.28 0.22 0.90 16 24 C -0.05 0.36 8.66 22.31 0.19 0.56 16 25 C -0.13 0.78 5.34 -19.90 -0.11 0.68 16 26 C -0.08 0.54 2.80 71.23 0.20 0.74 16 27 O -0.55 1.48 12.83 -148.98 -1.91 -0.43 16 28 Si 0.77 -5.80 29.87 68.60 2.05 -3.75 16 29 C -0.03 0.09 9.17 22.52 0.21 0.30 16 30 C -0.13 0.63 7.43 31.12 0.23 0.86 16 31 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 32 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 33 H 0.07 0.53 5.88 -2.39 -0.01 0.52 16 34 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 35 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.07 -0.12 8.14 -2.39 -0.02 -0.13 16 37 H 0.07 0.52 5.88 -2.39 -0.01 0.51 16 38 H 0.09 -0.03 8.14 -2.38 -0.02 -0.05 16 39 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 40 H 0.42 -1.28 8.84 -92.71 -0.82 -2.10 16 41 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 42 H 0.10 -0.24 7.41 -2.39 -0.02 -0.26 16 43 H 0.44 -0.62 8.00 -213.32 -1.71 -2.33 16 44 H 0.44 -0.13 6.03 -213.33 -1.29 -1.42 16 45 H 0.17 -1.56 8.06 -2.91 -0.02 -1.59 16 46 H 0.17 -2.18 4.82 -2.91 -0.01 -2.20 16 47 H 0.13 -1.12 7.96 -2.39 -0.02 -1.14 16 48 H 0.39 -3.23 8.70 -74.06 -0.64 -3.87 16 49 H -0.31 -0.55 7.11 99.48 0.71 0.15 16 50 H -0.27 1.34 7.00 99.48 0.70 2.04 16 51 H 0.15 -0.86 6.41 -2.91 -0.02 -0.88 16 52 H 0.09 -0.25 8.10 -2.39 -0.02 -0.27 16 53 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 Total: 0.00 -28.46 439.76 -2.64 -31.10 By element: Atomic # 1 Polarization: -13.24 SS G_CDS: -3.41 Total: -16.64 kcal Atomic # 6 Polarization: 10.72 SS G_CDS: 5.58 Total: 16.30 kcal Atomic # 7 Polarization: -1.32 SS G_CDS: -5.22 Total: -6.53 kcal Atomic # 8 Polarization: -17.67 SS G_CDS: -2.34 Total: -20.01 kcal Atomic # 9 Polarization: -1.17 SS G_CDS: 0.70 Total: -0.47 kcal Atomic # 14 Polarization: -5.80 SS G_CDS: 2.05 Total: -3.75 kcal Total: -28.46 -2.64 -31.10 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14472184_12335834.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.958 kcal (2) G-P(sol) polarization free energy of solvation -28.461 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.420 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.102 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds