Wall clock time and date at job start Tue Mar 9 2021 13:10:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53003 * 109.46984 * 2 1 4 4 C 1.53002 * 109.46911 * 240.00328 * 2 1 3 5 5 O 1.45197 * 109.46865 * 120.00280 * 2 1 3 6 6 C 1.34628 * 117.00328 * 60.00248 * 5 2 1 7 7 O 1.21514 * 120.00143 * 359.97438 * 6 5 2 8 8 N 1.34782 * 120.00136 * 179.97438 * 6 5 2 9 9 C 1.46498 * 120.00123 * 179.97438 * 8 6 5 10 10 H 1.09005 * 112.85098 * 336.19362 * 9 8 6 11 11 C 1.53776 * 113.69292 * 107.46163 * 9 8 6 12 12 C 1.53788 * 87.08175 * 139.99274 * 11 9 8 13 13 H 1.09001 * 113.68690 * 89.12966 * 12 11 9 14 14 C 1.50692 * 113.61461 * 220.01897 * 12 11 9 15 15 O 1.21286 * 120.00135 * 97.49656 * 14 12 11 16 16 N 1.34781 * 120.00064 * 277.49832 * 14 12 11 17 17 N 1.40103 * 119.99992 * 180.02562 * 16 14 12 18 18 C 1.34773 * 119.99741 * 180.02562 * 17 16 14 19 19 O 1.21551 * 120.00433 * 359.97438 * 18 17 16 20 20 C 1.47852 * 119.99429 * 179.97438 * 18 17 16 21 21 C 1.39538 * 120.14407 * 359.97438 * 20 18 17 22 22 C 1.38071 * 119.84425 * 179.97438 * 21 20 18 23 23 Br 1.89101 * 119.93859 * 179.97438 * 22 21 20 24 24 C 1.38423 * 120.12614 * 359.97438 * 22 21 20 25 25 C 1.38367 * 120.28073 * 359.97438 * 24 22 21 26 26 C 1.50696 * 119.92375 * 180.02562 * 25 24 22 27 27 O 1.42903 * 109.47131 * 119.99697 * 26 25 24 28 28 Si 1.86305 * 109.47185 * 0.02562 * 26 25 24 29 29 C 1.37940 * 120.15548 * 0.29715 * 25 24 22 30 30 C 1.53778 * 87.07907 * 334.56765 * 12 11 9 31 31 H 1.09000 * 109.46727 * 299.99729 * 1 2 3 32 32 H 1.08991 * 109.47061 * 59.99629 * 1 2 3 33 33 H 1.08996 * 109.46846 * 180.02562 * 1 2 3 34 34 H 1.08996 * 109.46570 * 180.02562 * 3 2 1 35 35 H 1.08993 * 109.47008 * 300.00075 * 3 2 1 36 36 H 1.09000 * 109.47168 * 60.00541 * 3 2 1 37 37 H 1.09004 * 109.46977 * 299.99594 * 4 2 1 38 38 H 1.09000 * 109.47177 * 59.99568 * 4 2 1 39 39 H 1.08996 * 109.47200 * 180.02562 * 4 2 1 40 40 H 0.96993 * 119.99789 * 359.97438 * 8 6 5 41 41 H 1.08998 * 113.61611 * 25.44657 * 11 9 8 42 42 H 1.09005 * 113.61753 * 254.53824 * 11 9 8 43 43 H 0.96997 * 120.00191 * 359.97438 * 16 14 12 44 44 H 0.97005 * 119.99763 * 359.97438 * 17 16 14 45 45 H 1.08000 * 120.07961 * 359.97438 * 21 20 18 46 46 H 1.07999 * 119.86428 * 180.02562 * 24 22 21 47 47 H 1.08999 * 109.47358 * 240.00057 * 26 25 24 48 48 H 0.96700 * 114.00311 * 300.00591 * 27 26 25 49 49 H 1.48499 * 109.99670 * 58.67633 * 28 26 25 50 50 H 1.48497 * 110.00233 * 179.97438 * 28 26 25 51 51 H 1.08003 * 120.06458 * 179.72930 * 29 25 24 52 52 H 1.08999 * 113.61539 * 139.98165 * 30 12 11 53 53 H 1.08999 * 113.61517 * 270.88374 * 30 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9510 -2.5095 0.5039 8 7 2.0681 -2.6658 2.4166 9 6 1.6740 -4.0669 2.5831 10 1 0.7592 -4.3161 2.0454 11 6 2.8202 -5.0638 2.3436 12 6 2.2715 -5.8609 3.5389 13 1 1.5201 -6.6010 3.2637 14 6 3.3457 -6.4225 4.4341 15 8 3.6612 -5.8331 5.4461 16 7 3.9560 -7.5798 4.1102 17 7 4.9544 -8.1022 4.9429 18 6 5.5650 -9.2591 4.6187 19 8 5.2492 -9.8495 3.6042 20 6 6.6189 -9.8100 5.4971 21 6 6.9841 -9.1344 6.6622 22 6 7.9687 -9.6548 7.4783 23 35 8.4662 -8.7410 9.0573 24 6 8.5924 -10.8441 7.1428 25 6 8.2337 -11.5189 5.9893 26 6 8.9176 -12.8134 5.6322 27 8 7.9479 -13.8606 5.5611 28 14 10.1832 -13.2273 6.9352 29 6 7.2554 -11.0067 5.1627 30 6 1.6756 -4.5375 4.0471 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8899 33 1 -0.3633 -1.0276 0.0005 34 1 3.1300 1.4425 -0.0005 35 1 1.6767 1.9563 -0.8899 36 1 1.6768 1.9563 0.8900 37 1 1.6767 -1.7489 -1.2493 38 1 1.6766 -0.2074 -2.1393 39 1 3.1300 -0.7216 -1.2491 40 1 2.6282 -2.2371 3.0824 41 1 3.8098 -4.6414 2.5179 42 1 2.7464 -5.5942 1.3942 43 1 3.7035 -8.0513 3.3011 44 1 5.2066 -7.6307 5.7523 45 1 6.4977 -8.2066 6.9249 46 1 9.3618 -11.2475 7.7844 47 1 9.4112 -12.7090 4.6659 48 1 7.4686 -14.0097 6.3876 49 1 9.5270 -13.3410 8.2625 50 1 10.8643 -14.5022 6.5949 51 1 6.9796 -11.5324 4.2605 52 1 0.6778 -4.6430 4.4729 53 1 2.3523 -3.9712 4.6870 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14472184_12335870.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:29 Heat of formation + Delta-G solvation = -87.476631 kcal Electronic energy + Delta-G solvation = -37594.563899 eV Core-core repulsion = 32288.796658 eV Total energy + Delta-G solvation = -5305.767241 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 470.098 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.15631 -41.83007 -41.25229 -40.18021 -39.23693 -37.85511 -37.78059 -36.61815 -35.37622 -34.20703 -33.80634 -33.66958 -31.93976 -30.50531 -28.36765 -28.30946 -27.54344 -27.03638 -26.79076 -25.40100 -23.83286 -22.95624 -22.54577 -21.89233 -21.35231 -20.53709 -19.49247 -19.21752 -19.01761 -18.54081 -17.78044 -17.62828 -17.25696 -17.19428 -16.99597 -16.90425 -16.46499 -16.38661 -16.25898 -15.83463 -15.71762 -15.48205 -15.35616 -15.29181 -15.02403 -14.87921 -14.39014 -14.27776 -14.22783 -13.82150 -13.54510 -13.37504 -13.33417 -13.11270 -13.08565 -12.92598 -12.87210 -12.66909 -12.57955 -12.47128 -12.34561 -12.32587 -12.20136 -12.01582 -11.87619 -11.80601 -11.69824 -11.39717 -11.38432 -11.16413 -11.10455 -10.75495 -10.39499 -10.19306 -9.97278 -9.62694 -4.96662 -0.62964 -0.22061 0.38912 0.54981 1.11548 1.19158 1.22091 1.49799 1.55788 1.72660 1.93633 2.35068 2.67241 3.07811 3.19126 3.20958 3.29940 3.35873 3.40324 3.65595 3.69103 3.73889 3.76644 3.79667 3.81318 3.90806 3.94123 4.00418 4.12594 4.22723 4.42108 4.54185 4.56421 4.60619 4.61230 4.67899 4.70316 4.73852 4.76299 4.84154 4.84519 4.86116 4.87226 4.96632 4.98578 5.00899 5.15020 5.27041 5.29400 5.30422 5.34567 5.44259 5.51504 5.58078 6.24534 6.37500 6.42912 6.59006 7.08265 7.32111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.644 3.356 7 O -0.591 6.591 8 N -0.692 5.692 9 C 0.139 3.861 10 H 0.122 0.878 11 C -0.133 4.133 12 C -0.115 4.115 13 H 0.155 0.845 14 C 0.530 3.470 15 O -0.564 6.564 16 N -0.516 5.516 17 N -0.517 5.517 18 C 0.566 3.434 19 O -0.558 6.558 20 C -0.128 4.128 21 C -0.047 4.047 22 C -0.098 4.098 23 Br -0.029 7.029 24 C -0.055 4.055 25 C -0.111 4.111 26 C -0.080 4.080 27 O -0.544 6.544 28 Si 0.757 3.243 29 C -0.019 4.019 30 C -0.115 4.115 31 H 0.061 0.939 32 H 0.086 0.914 33 H 0.065 0.935 34 H 0.068 0.932 35 H 0.098 0.902 36 H 0.069 0.931 37 H 0.065 0.935 38 H 0.086 0.914 39 H 0.060 0.940 40 H 0.416 0.584 41 H 0.088 0.912 42 H 0.097 0.903 43 H 0.440 0.560 44 H 0.436 0.564 45 H 0.154 0.846 46 H 0.159 0.841 47 H 0.135 0.865 48 H 0.388 0.612 49 H -0.274 1.274 50 H -0.297 1.297 51 H 0.141 0.859 52 H 0.099 0.901 53 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.092 2.546 1.560 3.646 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.398 3.602 7 O -0.482 6.482 8 N -0.350 5.350 9 C 0.035 3.965 10 H 0.140 0.860 11 C -0.172 4.172 12 C -0.138 4.138 13 H 0.173 0.827 14 C 0.318 3.682 15 O -0.441 6.441 16 N -0.265 5.265 17 N -0.265 5.265 18 C 0.354 3.646 19 O -0.436 6.436 20 C -0.133 4.133 21 C -0.067 4.067 22 C -0.178 4.178 23 Br 0.057 6.943 24 C -0.074 4.074 25 C -0.112 4.112 26 C -0.189 4.189 27 O -0.352 6.352 28 Si 0.661 3.339 29 C -0.038 4.038 30 C -0.153 4.153 31 H 0.080 0.920 32 H 0.105 0.895 33 H 0.084 0.916 34 H 0.087 0.913 35 H 0.117 0.883 36 H 0.088 0.912 37 H 0.084 0.916 38 H 0.105 0.895 39 H 0.080 0.920 40 H 0.253 0.747 41 H 0.107 0.893 42 H 0.115 0.885 43 H 0.284 0.716 44 H 0.281 0.719 45 H 0.171 0.829 46 H 0.176 0.824 47 H 0.153 0.847 48 H 0.238 0.762 49 H -0.200 1.200 50 H -0.225 1.225 51 H 0.159 0.841 52 H 0.118 0.882 53 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 2.375 2.148 1.696 3.624 hybrid contribution -0.987 -0.656 0.082 1.188 sum 1.388 1.492 1.778 2.705 Atomic orbital electron populations 1.22477 0.93957 1.03818 1.03484 1.22345 0.94506 0.92510 0.81525 1.21897 1.02418 0.91043 1.04222 1.22473 1.01578 1.02352 0.97303 1.86315 1.71551 1.23455 1.47275 1.18394 0.78538 0.80677 0.82576 1.90902 1.42165 1.70985 1.44105 1.44763 1.54791 1.12353 1.23124 1.22551 0.99005 0.77177 0.97724 0.86005 1.23496 0.99380 0.96416 0.97950 1.22574 0.96624 0.98503 0.96096 0.82714 1.21183 0.82315 0.78191 0.86478 1.90744 1.65645 1.59880 1.27860 1.45149 1.33102 1.23974 1.24304 1.44778 1.33746 1.23401 1.24528 1.18345 0.81467 0.79234 0.85508 1.90834 1.65484 1.60032 1.27212 1.19472 0.99350 0.98082 0.96397 1.21430 0.94461 0.99223 0.91612 1.21705 1.01515 0.98223 0.96311 1.96880 1.91625 1.75808 1.30022 1.21425 0.97629 0.92675 0.95685 1.20276 0.98163 0.98120 0.94684 1.25255 0.96905 0.84012 1.12718 1.86619 1.54214 1.54104 1.40284 0.94223 0.80760 0.84599 0.74316 1.21251 0.91785 0.92108 0.98659 1.23288 1.03354 0.93382 0.95317 0.91992 0.89512 0.91560 0.91269 0.88331 0.91227 0.91567 0.89516 0.92047 0.74750 0.89301 0.88471 0.71599 0.71891 0.82888 0.82441 0.84704 0.76209 1.20038 1.22480 0.84121 0.88240 0.88434 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.48 8.37 71.98 0.60 0.13 16 2 C 0.13 0.32 1.13 -10.79 -0.01 0.31 16 3 C -0.14 0.29 8.85 71.98 0.64 0.93 16 4 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 5 O -0.37 -1.87 9.94 -55.37 -0.55 -2.42 16 6 C 0.64 3.53 8.06 129.79 1.05 4.57 16 7 O -0.59 -5.94 11.48 19.80 0.23 -5.71 16 8 N -0.69 0.52 5.36 -567.61 -3.04 -2.52 16 9 C 0.14 -0.54 4.24 45.52 0.19 -0.35 16 10 H 0.12 -0.29 7.46 -2.38 -0.02 -0.31 16 11 C -0.13 0.78 7.43 31.12 0.23 1.02 16 12 C -0.12 0.81 4.15 -11.01 -0.05 0.76 16 13 H 0.16 -1.88 8.14 -2.39 -0.02 -1.90 16 14 C 0.53 -0.69 7.47 87.65 0.65 -0.04 16 15 O -0.56 -2.88 15.74 -3.05 -0.05 -2.93 16 16 N -0.52 0.84 6.26 -173.53 -1.09 -0.24 16 17 N -0.52 0.14 6.21 -175.60 -1.09 -0.95 16 18 C 0.57 1.41 7.89 86.79 0.68 2.09 16 19 O -0.56 -4.72 16.19 -3.88 -0.06 -4.78 16 20 C -0.13 0.06 5.87 -20.09 -0.12 -0.06 16 21 C -0.05 0.15 9.28 22.54 0.21 0.36 16 22 C -0.10 0.29 6.22 22.27 0.14 0.43 16 23 Br -0.03 0.07 33.69 -20.37 -0.69 -0.62 16 24 C -0.05 0.23 8.41 22.34 0.19 0.42 16 25 C -0.11 0.36 5.38 -19.91 -0.11 0.25 16 26 C -0.08 0.30 2.82 71.23 0.20 0.50 16 27 O -0.54 0.04 12.77 -148.98 -1.90 -1.86 16 28 Si 0.76 -3.56 29.78 68.60 2.04 -1.52 16 29 C -0.02 0.00 9.16 22.53 0.21 0.21 16 30 C -0.11 0.67 7.16 31.12 0.22 0.89 16 31 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 32 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 33 H 0.07 0.49 5.88 -2.39 -0.01 0.48 16 34 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 35 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 36 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 37 H 0.07 0.50 5.88 -2.38 -0.01 0.48 16 38 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 39 H 0.06 0.13 8.14 -2.39 -0.02 0.12 16 40 H 0.42 -1.62 8.84 -92.71 -0.82 -2.44 16 41 H 0.09 -0.38 8.09 -2.39 -0.02 -0.40 16 42 H 0.10 -0.67 8.14 -2.38 -0.02 -0.69 16 43 H 0.44 -1.64 8.00 -213.32 -1.71 -3.35 16 44 H 0.44 -1.02 6.04 -213.31 -1.29 -2.30 16 45 H 0.15 -1.00 6.40 -2.91 -0.02 -1.02 16 46 H 0.16 -1.17 4.86 -2.91 -0.01 -1.19 16 47 H 0.14 -0.74 7.96 -2.39 -0.02 -0.76 16 48 H 0.39 -2.25 8.70 -74.06 -0.64 -2.90 16 49 H -0.27 0.39 7.11 99.48 0.71 1.09 16 50 H -0.30 -1.00 7.11 99.48 0.71 -0.29 16 51 H 0.14 0.26 7.65 -2.91 -0.02 0.24 16 52 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 53 H 0.10 -0.34 7.41 -2.39 -0.02 -0.36 16 Total: 0.00 -24.15 456.47 -4.06 -28.21 By element: Atomic # 1 Polarization: -13.79 SS G_CDS: -3.39 Total: -17.19 kcal Atomic # 6 Polarization: 7.01 SS G_CDS: 5.53 Total: 12.54 kcal Atomic # 7 Polarization: 1.50 SS G_CDS: -5.22 Total: -3.72 kcal Atomic # 8 Polarization: -15.37 SS G_CDS: -2.34 Total: -17.71 kcal Atomic # 14 Polarization: -3.56 SS G_CDS: 2.04 Total: -1.52 kcal Atomic # 35 Polarization: 0.07 SS G_CDS: -0.69 Total: -0.62 kcal Total: -24.15 -4.06 -28.21 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14472184_12335870.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.264 kcal (2) G-P(sol) polarization free energy of solvation -24.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.416 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.060 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.212 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds